RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 EPS15L1Q9UBC2 864 aa18.09■□□□□ 0.49
CPNE1-208ENST00000414711 GMEB2Q9UKD1 530 aa18.09■□□□□ 0.49
CPNE1-208ENST00000414711 CEP295Q9C0D2 2601 aa18.09■□□□□ 0.49
CPNE1-208ENST00000414711 PATJQ8NI35 1801 aa18.08■□□□□ 0.48
CPNE1-208ENST00000414711 POLGP54098 1239 aaPredicted RBP18.08■□□□□ 0.48
CPNE1-208ENST00000414711 BCAR1P56945 870 aa18.08■□□□□ 0.48
CPNE1-208ENST00000414711 CSTF1Q05048 431 aaKnown RBP18.08■□□□□ 0.48
CPNE1-208ENST00000414711 SLC35G1Q2M3R5 365 aa18.08■□□□□ 0.48
CPNE1-208ENST00000414711 MCMDC2Q4G0Z9 681 aa18.08■□□□□ 0.48
CPNE1-208ENST00000414711 ZNF589Q86UQ0 364 aaPredicted RBP18.08■□□□□ 0.48
CPNE1-208ENST00000414711 STAMQ92783 540 aa18.08■□□□□ 0.48
CPNE1-208ENST00000414711 NXPE3Q969Y0 559 aa18.08■□□□□ 0.48
CPNE1-208ENST00000414711 PPP1R16BQ96T49 567 aa18.08■□□□□ 0.48
CPNE1-208ENST00000414711 BCO2Q9BYV7 579 aa18.08■□□□□ 0.48
CPNE1-208ENST00000414711 DCTPP1Q9H773 170 aa18.08■□□□□ 0.48
CPNE1-208ENST00000414711 ZSCAN32Q9NX65 697 aa18.08■□□□□ 0.48
CPNE1-208ENST00000414711 MAD2L2Q9UI95 211 aa18.08■□□□□ 0.48
CPNE1-208ENST00000414711 CLUHO75153 1309 aa18.07■□□□□ 0.48
CPNE1-208ENST00000414711 B4E1Z4 1266 aa18.07■□□□□ 0.48
CPNE1-208ENST00000414711 LILRB5O75023 590 aa18.07■□□□□ 0.48
CPNE1-208ENST00000414711 KCNA4P22459 653 aa18.07■□□□□ 0.48
CPNE1-208ENST00000414711 TMEM173Q86WV6 379 aaPredicted RBP18.07■□□□□ 0.48
CPNE1-208ENST00000414711 RNF169Q8NCN4 708 aa18.07■□□□□ 0.48
CPNE1-208ENST00000414711 SMARCC2Q8TAQ2 1214 aa18.07■□□□□ 0.48
CPNE1-208ENST00000414711 OSMRQ99650 979 aa18.07■□□□□ 0.48
CPNE1-208ENST00000414711 MRPL9Q9BYD2 267 aaKnown RBP18.07■□□□□ 0.48
CPNE1-208ENST00000414711 SLC2A4RGQ9NR83 387 aa18.07■□□□□ 0.48
CPNE1-208ENST00000414711 MIA3Q5JRA6 1907 aa18.07■□□□□ 0.48
CPNE1-208ENST00000414711 ITGB5P18084 799 aa18.06■□□□□ 0.48
CPNE1-208ENST00000414711 CLCN4P51793 760 aa18.06■□□□□ 0.48
CPNE1-208ENST00000414711 STARD6P59095 220 aa18.06■□□□□ 0.48
CPNE1-208ENST00000414711 KIZQ2M2Z5 673 aa18.06■□□□□ 0.48
CPNE1-208ENST00000414711 DDX53Q86TM3 631 aaKnown RBP18.06■□□□□ 0.48
CPNE1-208ENST00000414711 ECHDC2Q86YB7 292 aa18.06■□□□□ 0.48
CPNE1-208ENST00000414711 KIAA0319LQ8IZA0 1049 aa18.06■□□□□ 0.48
CPNE1-208ENST00000414711 SHDQ96IW2 340 aa18.06■□□□□ 0.48
CPNE1-208ENST00000414711 MYADMQ96S97 322 aa18.06■□□□□ 0.48
CPNE1-208ENST00000414711 JPH1Q9HDC5 661 aaPredicted RBP18.06■□□□□ 0.48
CPNE1-208ENST00000414711 WDR6Q9NNW5 1121 aaKnown RBP18.06■□□□□ 0.48
CPNE1-208ENST00000414711 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.06■□□□□ 0.48
CPNE1-208ENST00000414711 LAMA4Q16363 1823 aa18.06■□□□□ 0.48
CPNE1-208ENST00000414711 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.05■□□□□ 0.48
CPNE1-208ENST00000414711 PALM3A6NDB9 673 aaPredicted RBP18.05■□□□□ 0.48
CPNE1-208ENST00000414711 TBC1D4O60343 1298 aa18.05■□□□□ 0.48
CPNE1-208ENST00000414711 MX1P20591 662 aa18.05■□□□□ 0.48
CPNE1-208ENST00000414711 KLRC1P26715 233 aa18.05■□□□□ 0.48
CPNE1-208ENST00000414711 CRYBB1P53674 252 aaPredicted RBP18.05■□□□□ 0.48
CPNE1-208ENST00000414711 MTMR1Q13613 665 aa18.05■□□□□ 0.48
CPNE1-208ENST00000414711 IFIT1BQ5T764 474 aaKnown RBP18.05■□□□□ 0.48
CPNE1-208ENST00000414711 CMASQ8NFW8 434 aaPredicted RBP18.05■□□□□ 0.48
CPNE1-208ENST00000414711 HELQQ8TDG4 1101 aa18.05■□□□□ 0.48
CPNE1-208ENST00000414711 EVI5LQ96CN4 794 aa18.05■□□□□ 0.48
CPNE1-208ENST00000414711 UBAC1Q9BSL1 405 aa18.05■□□□□ 0.48
CPNE1-208ENST00000414711 RIOX1Q9H6W3 641 aa18.05■□□□□ 0.48
CPNE1-208ENST00000414711 FRYQ5TBA9 3013 aa18.04■□□□□ 0.48
CPNE1-208ENST00000414711 ASPMQ8IZT6 3477 aa18.04■□□□□ 0.48
CPNE1-208ENST00000414711 PNMA6FA0A0J9YX94 578 aa18.04■□□□□ 0.48
CPNE1-208ENST00000414711 ZNF213O14771 459 aa18.04■□□□□ 0.48
CPNE1-208ENST00000414711 ZC3H11AO75152 810 aaKnown RBP eCLIP18.04■□□□□ 0.48
CPNE1-208ENST00000414711 PMLP29590 882 aa18.04■□□□□ 0.48
CPNE1-208ENST00000414711 SPEM2Q0P670 501 aa18.04■□□□□ 0.48
CPNE1-208ENST00000414711 WTAPQ15007 396 aa18.04■□□□□ 0.48
CPNE1-208ENST00000414711 USP17L6PQ6QN14 398 aa18.04■□□□□ 0.48
CPNE1-208ENST00000414711 PLPPR4Q7Z2D5 763 aa18.04■□□□□ 0.48
CPNE1-208ENST00000414711 CUL5Q93034 780 aa18.04■□□□□ 0.48
CPNE1-208ENST00000414711 EMILIN2Q9BXX0 1053 aa18.04■□□□□ 0.48
CPNE1-208ENST00000414711 ZSWIM5Q9P217 1185 aa18.04■□□□□ 0.48
CPNE1-208ENST00000414711 SLC9A2Q9UBY0 812 aa18.04■□□□□ 0.48
CPNE1-208ENST00000414711 KANSL1LA0AUZ9 987 aa18.03■□□□□ 0.48
CPNE1-208ENST00000414711 KLRC2P26717 231 aa18.03■□□□□ 0.48
CPNE1-208ENST00000414711 STAT5BP51692 787 aa18.03■□□□□ 0.48
CPNE1-208ENST00000414711 SHC2P98077 582 aa18.03■□□□□ 0.48
CPNE1-208ENST00000414711 BCL7CQ8WUZ0 217 aaPredicted RBP18.03■□□□□ 0.48
CPNE1-208ENST00000414711 NELL1Q92832 810 aa18.03■□□□□ 0.48
CPNE1-208ENST00000414711 IGSF21Q96ID5 467 aa18.03■□□□□ 0.48
CPNE1-208ENST00000414711 KLHL5Q96PQ7 755 aa18.03■□□□□ 0.48
CPNE1-208ENST00000414711 MAN1C1Q9NR34 630 aa18.03■□□□□ 0.48
CPNE1-208ENST00000414711 DOCK8Q8NF50 2099 aa18.03■□□□□ 0.48
CPNE1-208ENST00000414711 CNOT1A5YKK6 2376 aaKnown RBP18.03■□□□□ 0.48
CPNE1-208ENST00000414711 COL4A3Q01955 1670 aa18.03■□□□□ 0.48
CPNE1-208ENST00000414711 CYTH3O43739 400 aa18.02■□□□□ 0.48
CPNE1-208ENST00000414711 ZSCAN20P17040 1043 aaPredicted RBP18.02■□□□□ 0.48
CPNE1-208ENST00000414711 HTR4Q13639 388 aa18.02■□□□□ 0.48
CPNE1-208ENST00000414711 UBXN2BQ14CS0 331 aa18.02■□□□□ 0.48
CPNE1-208ENST00000414711 BAZ2BQ9UIF8 2168 aaKnown RBP18.02■□□□□ 0.48
CPNE1-208ENST00000414711 NUMBLQ9Y6R0 609 aa18.02■□□□□ 0.48
CPNE1-208ENST00000414711 CARNS1A5YM72 827 aa18.01■□□□□ 0.47
CPNE1-208ENST00000414711 ANHXE9PGG2 379 aa18.01■□□□□ 0.47
CPNE1-208ENST00000414711 PIK3CDO00329 1044 aa18.01■□□□□ 0.47
CPNE1-208ENST00000414711 GPR32O75388 356 aa18.01■□□□□ 0.47
CPNE1-208ENST00000414711 PROS1P07225 676 aa18.01■□□□□ 0.47
CPNE1-208ENST00000414711 CNPP09543 421 aaKnown RBP18.01■□□□□ 0.47
CPNE1-208ENST00000414711 MAGEA9P43362 315 aa18.01■□□□□ 0.47
CPNE1-208ENST00000414711 ACTR2P61160 394 aa18.01■□□□□ 0.47
CPNE1-208ENST00000414711 NMIQ13287 307 aaPredicted RBP18.01■□□□□ 0.47
CPNE1-208ENST00000414711 DDX1Q92499 740 aaKnown RBP18.01■□□□□ 0.47
CPNE1-208ENST00000414711 DDX23Q9BUQ8 820 aaKnown RBP18.01■□□□□ 0.47
CPNE1-208ENST00000414711 VN1R3Q9BXE9 311 aa18.01■□□□□ 0.47
CPNE1-208ENST00000414711 RHOBTB2Q9BYZ6 727 aa18.01■□□□□ 0.47
CPNE1-208ENST00000414711 RAB23Q9ULC3 237 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms