RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 PTPROQ16827 1216 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 ELOA3BQ3SY89 546 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 PLEKHG4Q58EX7 1191 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 IFIT1BQ5T764 474 aaKnown RBP5.68□□□□□ -1.5
VPS41-205ENST00000414632 RNF187Q5TA31 235 aaPredicted RBP5.68□□□□□ -1.5
VPS41-205ENST00000414632 ERICH6BQ5W0A0 696 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 CASC1Q6TDU7 716 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 NBPF11Q86T75 865 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 IQCA1Q86XH1 822 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 PRPF38AQ8NAV1 312 aaKnown RBP5.68□□□□□ -1.5
VPS41-205ENST00000414632 ELOA3Q8NG57 546 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 NCOA7Q8NI08 942 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 NPLOC4Q8TAT6 608 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 GPBAR1Q8TDU6 330 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 DCAF4Q8WV16 495 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 TRIB2Q92519 343 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 TCEANC2Q96MN5 208 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 MMP19Q99542 508 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 UBAC1Q9BSL1 405 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 UBA5Q9GZZ9 404 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 SOX17Q9H6I2 414 aaPredicted RBP5.68□□□□□ -1.5
VPS41-205ENST00000414632 KAT14Q9H8E8 782 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 CNNM2Q9H8M5 875 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 TCP11L1Q9NUJ3 509 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 FANCLQ9NW38 375 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 FLRT1Q9NZU1 646 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 FEM1BQ9UK73 627 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 ZNF214Q9UL59 606 aaPredicted RBP5.68□□□□□ -1.5
VPS41-205ENST00000414632 PCDHA4Q9UN74 947 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 PPME1Q9Y570 386 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 KIAA0100Q14667 2235 aaKnown RBP5.68□□□□□ -1.5
VPS41-205ENST00000414632 MKI67P46013 3256 aaKnown RBP5.68□□□□□ -1.5
VPS41-205ENST00000414632 A0A1W2PQH9 124 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 IFIT3O14879 490 aaKnown RBP5.67□□□□□ -1.5
VPS41-205ENST00000414632 PRC1O43663 620 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 DHX16O60231 1041 aaKnown RBP5.67□□□□□ -1.5
VPS41-205ENST00000414632 EIF4EBP3O60516 100 aaPredicted RBP5.67□□□□□ -1.5
VPS41-205ENST00000414632 COBLO75128 1261 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 DDAH1O94760 285 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 GJB6O95452 261 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 CYP11A1P05108 521 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 ALAS1P13196 640 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 CPA1P15085 419 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 ZKSCAN1P17029 563 aaPredicted RBP5.67□□□□□ -1.5
VPS41-205ENST00000414632 RXRAP19793 462 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 ALAS2P22557 587 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 ADORA2AP29274 412 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 CCND3P30281 292 aaPredicted RBP5.67□□□□□ -1.5
VPS41-205ENST00000414632 CYP2C19P33261 490 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 MAP2K3P46734 347 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 NOVP48745 357 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 ARL4DP49703 201 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 UBXN2AP68543 259 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 GRB14Q14449 540 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 INPP5AQ14642 412 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 WTAPQ15007 396 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 NECTIN1Q15223 517 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 POU4F3Q15319 338 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 SEC23AQ15436 765 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 ADCK5Q3MIX3 580 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 TMEM67Q5HYA8 995 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 SYDE2Q5VT97 1194 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 TXNDC11Q6PKC3 985 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 DPP9Q86TI2 863 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 RIOX2Q8IUF8 465 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 MB21D2Q8IYB1 491 aaPredicted RBP5.67□□□□□ -1.5
VPS41-205ENST00000414632 MB21D1Q8N884 522 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 C19orf47Q8N9M1 422 aaKnown RBP5.67□□□□□ -1.5
VPS41-205ENST00000414632 CHURC1Q8WUH1 139 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 SOCS4Q8WXH5 440 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 USP6NLQ92738 828 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 TTC14Q96N46 770 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 APBA2Q99767 749 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 MYL10Q9BUA6 226 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 TEX13BQ9BXU2 312 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 RNF208Q9H0X6 261 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 MROH8Q9H579 483 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 SLC38A10Q9HBR0 1119 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 VAT1LQ9HCJ6 419 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 ADAMTS5Q9UNA0 930 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 STARD13Q9Y3M8 1113 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 DDX49Q9Y6V7 483 aaKnown RBP5.67□□□□□ -1.5
VPS41-205ENST00000414632 ZNF536O15090 1300 aa5.67□□□□□ -1.5
VPS41-205ENST00000414632 DOCK5Q9H7D0 1870 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 ESYT3A0FGR9 886 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 ERICH2A1L162 156 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 SLC15A5A6NIM6 579 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 LINC01387J3KSC0 135 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 HTR3BO95264 441 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 ECEL1O95672 775 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 SLC25A27O95847 323 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 HMGCRP04035 888 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 PARP1P09874 1014 aaKnown RBP5.66□□□□□ -1.5
VPS41-205ENST00000414632 SNHG28P0DPA3 235 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 FCER1AP12319 257 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 SELPP16109 830 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 IBSPP21815 317 aaPredicted RBP5.66□□□□□ -1.5
VPS41-205ENST00000414632 MAOBP27338 520 aa5.66□□□□□ -1.5
VPS41-205ENST00000414632 CACNB2Q08289 660 aaPredicted RBP5.66□□□□□ -1.5
VPS41-205ENST00000414632 ZNF543Q08ER8 600 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms