RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 GRM6O15303 877 aa11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 DKC1O60832 514 aaKnown RBP eCLIP11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 SRGAP2CP0DJJ0 459 aa11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 DARSP14868 501 aaKnown RBP11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 ZSCAN20P17040 1043 aaPredicted RBP11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 TECP42680 631 aa11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 POLGP54098 1239 aaPredicted RBP11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 MRPS5P82675 430 aaKnown RBP11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 LONRF3Q496Y0 759 aa11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 SPOUT1Q5T280 376 aaKnown RBP11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 EP400NLQ6ZTU2 488 aa11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 OTUD6AQ7L8S5 288 aa11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 C4orf19Q8IY42 314 aa11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 CRIPAKQ8N1N5 446 aa11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 TMX3Q96JJ7 454 aa11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 SAMD11Q96NU1 681 aa11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 ASB2Q96Q27 587 aa11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 MTMR9Q96QG7 549 aa11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 GCOM2Q9BZD3 368 aaPredicted RBP11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 FOXP1Q9H334 677 aaPredicted RBP11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 ZSWIM4Q9H7M6 989 aa11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 ATP6V0A4Q9HBG4 840 aa11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 ALG13Q9NP73 1137 aaKnown RBP11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 HCSTQ9UBK5 93 aa11.39□□□□□ -0.59
NCKIPSD-202ENST00000413374 CHD9Q3L8U1 2897 aa11.38□□□□□ -0.59
NCKIPSD-202ENST00000413374 POTEMA6NI47 508 aa11.38□□□□□ -0.59
NCKIPSD-202ENST00000413374 LINC00271P0C7V0 271 aa11.38□□□□□ -0.59
NCKIPSD-202ENST00000413374 DSC3Q14574 896 aa11.38□□□□□ -0.59
NCKIPSD-202ENST00000413374 PTPROQ16827 1216 aa11.38□□□□□ -0.59
NCKIPSD-202ENST00000413374 TJAP1Q5JTD0 557 aa11.38□□□□□ -0.59
NCKIPSD-202ENST00000413374 TTC38Q5R3I4 469 aa11.38□□□□□ -0.59
NCKIPSD-202ENST00000413374 MCTP1Q6DN14 999 aa11.38□□□□□ -0.59
NCKIPSD-202ENST00000413374 MAEAQ7L5Y9 396 aa11.38□□□□□ -0.59
NCKIPSD-202ENST00000413374 PIGOQ8TEQ8 1089 aa11.38□□□□□ -0.59
NCKIPSD-202ENST00000413374 ATXN2LQ8WWM7 1075 aaKnown RBP11.38□□□□□ -0.59
NCKIPSD-202ENST00000413374 PRPF31Q8WWY3 499 aaKnown RBP11.38□□□□□ -0.59
NCKIPSD-202ENST00000413374 SLC7A3Q8WY07 619 aa11.38□□□□□ -0.59
NCKIPSD-202ENST00000413374 HSD17B14Q9BPX1 270 aa11.38□□□□□ -0.59
NCKIPSD-202ENST00000413374 RC3H2Q9HBD1 1191 aaKnown RBP11.38□□□□□ -0.59
NCKIPSD-202ENST00000413374 C1orf112Q9NSG2 853 aa11.38□□□□□ -0.59
NCKIPSD-202ENST00000413374 LMCD1Q9NZU5 365 aa11.38□□□□□ -0.59
NCKIPSD-202ENST00000413374 GBF1Q92538 1859 aa11.38□□□□□ -0.59
NCKIPSD-202ENST00000413374 GJB2P29033 226 aa11.37□□□□□ -0.59
NCKIPSD-202ENST00000413374 KCNQ1P51787 676 aa11.37□□□□□ -0.59
NCKIPSD-202ENST00000413374 FAM189BP81408 668 aa11.37□□□□□ -0.59
NCKIPSD-202ENST00000413374 TCEAL5Q5H9L2 206 aa11.37□□□□□ -0.59
NCKIPSD-202ENST00000413374 NOSTRINQ8IVI9 506 aa11.37□□□□□ -0.59
NCKIPSD-202ENST00000413374 CMTR2Q8IYT2 770 aaKnown RBP11.37□□□□□ -0.59
NCKIPSD-202ENST00000413374 HLA-CQ95604 372 aa11.37□□□□□ -0.59
NCKIPSD-202ENST00000413374 MRPL38Q96DV4 380 aaKnown RBP11.37□□□□□ -0.59
NCKIPSD-202ENST00000413374 TBC1D32Q96NH3 1257 aa11.37□□□□□ -0.59
NCKIPSD-202ENST00000413374 JPH2Q9BR39 696 aaPredicted RBP11.37□□□□□ -0.59
NCKIPSD-202ENST00000413374 TYW1Q9NV66 732 aaKnown RBP11.37□□□□□ -0.59
NCKIPSD-202ENST00000413374 COL4A3BPQ9Y5P4 624 aa11.37□□□□□ -0.59
NCKIPSD-202ENST00000413374 PTPRSQ13332 1948 aa11.37□□□□□ -0.59
NCKIPSD-202ENST00000413374 MED24O75448 989 aa11.36□□□□□ -0.59
NCKIPSD-202ENST00000413374 RB1P06400 928 aa11.36□□□□□ -0.59
NCKIPSD-202ENST00000413374 OR52Z1P0C646 297 aa11.36□□□□□ -0.59
NCKIPSD-202ENST00000413374 RFC5P40937 340 aa11.36□□□□□ -0.59
NCKIPSD-202ENST00000413374 CDC42EP1Q00587 391 aa11.36□□□□□ -0.59
NCKIPSD-202ENST00000413374 LAMTOR4Q0VGL1 99 aa11.36□□□□□ -0.59
NCKIPSD-202ENST00000413374 EMC2Q15006 297 aa11.36□□□□□ -0.59
NCKIPSD-202ENST00000413374 CATSPER4Q7RTX7 472 aa11.36□□□□□ -0.59
NCKIPSD-202ENST00000413374 CATSPER3Q86XQ3 398 aa11.36□□□□□ -0.59
NCKIPSD-202ENST00000413374 ECHDC2Q86YB7 292 aa11.36□□□□□ -0.59
NCKIPSD-202ENST00000413374 KLHL23Q8NBE8 558 aa11.36□□□□□ -0.59
NCKIPSD-202ENST00000413374 IL27Q8NEV9 243 aa11.36□□□□□ -0.59
NCKIPSD-202ENST00000413374 CLP1Q92989 425 aaKnown RBP11.36□□□□□ -0.59
NCKIPSD-202ENST00000413374 CCDC43Q96MW1 224 aaKnown RBP11.36□□□□□ -0.59
NCKIPSD-202ENST00000413374 MTRQ99707 1265 aa11.36□□□□□ -0.59
NCKIPSD-202ENST00000413374 IGFLR1Q9H665 355 aa11.36□□□□□ -0.59
NCKIPSD-202ENST00000413374 DHX33Q9H6R0 707 aaKnown RBP11.36□□□□□ -0.59
NCKIPSD-202ENST00000413374 TMEM161AQ9NX61 479 aa11.36□□□□□ -0.59
NCKIPSD-202ENST00000413374 NOL7Q9UMY1 257 aaKnown RBP11.36□□□□□ -0.59
NCKIPSD-202ENST00000413374 PLAGL2Q9UPG8 496 aa11.36□□□□□ -0.59
NCKIPSD-202ENST00000413374 PIN4Q9Y237 131 aaKnown RBP11.36□□□□□ -0.59
NCKIPSD-202ENST00000413374 PCDHB6Q9Y5E3 794 aa11.36□□□□□ -0.59
NCKIPSD-202ENST00000413374 SPTBN5Q9NRC6 3674 aaKnown RBP11.36□□□□□ -0.59
NCKIPSD-202ENST00000413374 KAT6AQ92794 2004 aa11.36□□□□□ -0.59
NCKIPSD-202ENST00000413374 CHD7Q9P2D1 2997 aa11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 C5orf67F2Z3F1 127 aa11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 H3BQV1 296 aa11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 ITGB1P05556 798 aa11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 SPATA31C1P0DKV0 1188 aa11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 SFPQP23246 707 aaKnown RBP eCLIP11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 DNAJB1P25685 340 aa11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 TOB1P50616 345 aaPredicted RBP11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 TWF2Q6IBS0 349 aaKnown RBP11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 LRRC55Q6ZSA7 311 aa11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 FERMT3Q86UX7 667 aa11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 ZNF410Q86VK4 478 aa11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 ZNF710Q8N1W2 664 aa11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 C4orf32Q8N8J7 132 aa11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 RNF149Q8NC42 400 aa11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 SPPL3Q8TCT6 385 aa11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 HELQQ8TDG4 1101 aa11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 POF1BQ8WVV4 589 aa11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 PSPC1Q8WXF1 523 aaKnown RBP11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 SYMPKQ92797 1274 aaKnown RBP11.35□□□□□ -0.59
NCKIPSD-202ENST00000413374 LPPQ93052 612 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms