RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 PCK1P35558 622 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 CCR3P51677 355 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 KPNA1P52294 538 aaPredicted RBP5.63□□□□□ -1.51
HERC4-205ENST00000412272 NECTIN1Q15223 517 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 MAPRE1Q15691 268 aaKnown RBP5.63□□□□□ -1.51
HERC4-205ENST00000412272 EZH2Q15910 746 aaKnown RBP5.63□□□□□ -1.51
HERC4-205ENST00000412272 TTC23LQ6PF05 361 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 KLHL35Q6PF15 583 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 TOGARAM2Q6ZUX3 1019 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 METTL3Q86U44 580 aaKnown RBP5.63□□□□□ -1.51
HERC4-205ENST00000412272 ALG1Q9BT22 464 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 PLEKHA5Q9HAU0 1116 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 UBN1Q9NPG3 1134 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 C12orf4Q9NQ89 552 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 ADGRG1Q9Y653 693 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 BCL9LQ86UU0 1499 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 ZFYVE16Q7Z3T8 1539 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 A1BGP04217 495 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 ETS2P15036 469 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 HOXD13P35453 343 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 ALDH5A1P51649 535 aaPredicted RBP5.63□□□□□ -1.51
HERC4-205ENST00000412272 GLE1Q53GS7 698 aaKnown RBP5.63□□□□□ -1.51
HERC4-205ENST00000412272 WDR44Q5JSH3 913 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 TJAP1Q5JTD0 557 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 CEP78Q5JTW2 689 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 PAPD7Q5XG87 772 aaKnown RBP5.63□□□□□ -1.51
HERC4-205ENST00000412272 CEP68Q76N32 757 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 STK32AQ8WU08 396 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 GAB3Q8WWW8 586 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 SEC16BQ96JE7 1060 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 NAPGQ99747 312 aaPredicted RBP5.63□□□□□ -1.51
HERC4-205ENST00000412272 SELENOOQ9BVL4 669 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 SHCBP1LQ9BZQ2 653 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 IL25Q9H293 177 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 GGA3Q9NZ52 723 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 INTUQ9ULD6 942 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 CYP46A1Q9Y6A2 500 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 KRBA1A5PL33 1030 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 A8MX80 341 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 TMEM114B3SHH9 223 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 H7C1D1 291 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 IL32P24001 234 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 HSPA1LP34931 641 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 CACNA2D1P54289 1103 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 PTPN5P54829 565 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 SNX16P57768 344 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 KIF23Q02241 960 aaPredicted RBP5.62□□□□□ -1.51
HERC4-205ENST00000412272 TMEM259Q4ZIN3 620 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 TUBA3EQ6PEY2 450 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 MILR1Q7Z6M3 343 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 ARRDC4Q8NCT1 418 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 GATA6Q92908 595 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 MRPL44Q9H9J2 332 aaKnown RBP5.62□□□□□ -1.51
HERC4-205ENST00000412272 SPC25Q9HBM1 224 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 INTS13Q9NVM9 706 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 ACEP12821 1306 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 ABCC12Q96J65 1359 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 A8MUI8 341 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 FKBP9O95302 570 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 TFRCP02786 760 aaKnown RBP5.62□□□□□ -1.51
HERC4-205ENST00000412272 HMOX2P30519 316 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 ATP1A2P50993 1020 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 HNRNPMP52272 730 aaKnown RBP eCLIP5.62□□□□□ -1.518e-8■■■■■ 31.1
HERC4-205ENST00000412272 NLRP6P59044 892 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 HLTFQ14527 1009 aaKnown RBP eCLIP5.62□□□□□ -1.512e-6■■■■□ 23.7
HERC4-205ENST00000412272 PTPROQ16827 1216 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 ANO4Q32M45 955 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 SYCP2LQ5T4T6 812 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 BTBD8Q5XKL5 378 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 EGFLAMQ63HQ2 1017 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 LRRC8BQ6P9F7 803 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 RAVER1Q8IY67 606 aaKnown RBP5.62□□□□□ -1.51
HERC4-205ENST00000412272 MMGT1Q8N4V1 131 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 CPSF7Q8N684 471 aaKnown RBP5.62□□□□□ -1.51
HERC4-205ENST00000412272 DTX3Q8N9I9 347 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 FLAD1Q8NFF5 587 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 PI4K2BQ8TCG2 481 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 OSBP2Q969R2 916 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 GBP5Q96PP8 586 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 FOXP3Q9BZS1 431 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 KRT23Q9C075 422 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 ESF1Q9H501 851 aaKnown RBP5.62□□□□□ -1.51
HERC4-205ENST00000412272 PIH1D3Q9NQM4 214 aaKnown RBP5.62□□□□□ -1.51
HERC4-205ENST00000412272 PCDHB4Q9Y5E5 795 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 NR2E3Q9Y5X4 410 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 TRIM64A6NGJ6 449 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 TRIM64BA6NI03 449 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 SIGLEC16A6NMB1 481 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 CETN3O15182 167 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 ICMTO60725 284 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 ATG7O95352 703 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 CRYZL1O95825 349 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 ENO2P09104 434 aaPredicted RBP5.62□□□□□ -1.51
HERC4-205ENST00000412272 NQO1P15559 274 aaKnown RBP5.62□□□□□ -1.51
HERC4-205ENST00000412272 TBXAS1P24557 533 aaPredicted RBP5.62□□□□□ -1.51
HERC4-205ENST00000412272 GNA11P29992 359 aa5.62□□□□□ -1.51
HERC4-205ENST00000412272 MLLT6P55198 1093 aaPredicted RBP5.62□□□□□ -1.51
HERC4-205ENST00000412272 POLR2GP62487 172 aaKnown RBP eCLIP5.62□□□□□ -1.51
HERC4-205ENST00000412272 CKAP4Q07065 602 aaKnown RBP5.62□□□□□ -1.51
HERC4-205ENST00000412272 TRIM28Q13263 835 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms