RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 USP18Q9UMW8 372 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 TELO2Q9Y4R8 837 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 PCDHGA2Q9Y5H1 932 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 LCTP09848 1927 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 KMT2EQ8IZD2 1858 aa2.71□□□□□ -1.98
RNU4-53P-201ENST00000410828 DMXL1Q9Y485 3027 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 A0A0U1RQF3 1178 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 KANSL1LA0AUZ9 987 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 ERICH2A1L162 156 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 POTEMA6NI47 508 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 SPDYE3A6NKU9 549 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 NT5C1B-RDH14C9J2C7 533 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 MEIS2O14770 477 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 SLC30A4O14863 429 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 BACH1O14867 736 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 NCAM2O15394 837 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 CYTH3O43739 400 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 TBC1D4O60343 1298 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 FOXD2O60548 495 aaPredicted RBP2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 LILRB5O75023 590 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZC3H11AO75152 810 aaKnown RBP eCLIP2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 ADH1AP07327 375 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 LAMP2P13473 410 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 SDSP20132 328 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 KLRC2P26717 231 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 TMOD1P28289 359 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 MAGEA9P43362 315 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 CLCN4P51793 760 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 BCAR1P56945 870 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 STARD6P59095 220 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 ACTR2P61160 394 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 PRKCQQ04759 706 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 CSTF1Q05048 431 aaKnown RBP2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 TRDNQ13061 729 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 NMIQ13287 307 aaPredicted RBP2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 COL9A3Q14050 684 aaPredicted RBP2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 COL9A2Q14055 689 aaPredicted RBP2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 DSC3Q14574 896 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 GRM4Q14833 912 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 SEC23AQ15436 765 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 IMMTQ16891 758 aaKnown RBP2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 KIZQ2M2Z5 673 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 SLC35G1Q2M3R5 365 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 PPM1JQ5JR12 505 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZNF484Q5JVG2 852 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 FAM160B1Q5W0V3 765 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 MIS18BP1Q6P0N0 1132 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 PDXDC2PQ6P474 469 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 POTEGQ6S5H5 508 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 CYP26C1Q6V0L0 522 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 CATIPQ7Z7H3 387 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 ECHDC2Q86YB7 292 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 CKAP2LQ8IYA6 745 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 METTL13Q8N6R0 699 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 RNF169Q8NCN4 708 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZBTB44Q8NCP5 570 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 CMASQ8NFW8 434 aaPredicted RBP2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 PJA1Q8NG27 643 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 NETO1Q8TDF5 533 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 HELQQ8TDG4 1101 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 GPR152Q8TDT2 470 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 PIBF1Q8WXW3 757 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 AUTS2Q8WXX7 1259 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 DDX1Q92499 740 aaKnown RBP2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 RILPL2Q969X0 211 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 RRP36Q96EU6 259 aaKnown RBP2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 IGSF21Q96ID5 467 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 KLHL5Q96PQ7 755 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 MAP7D2Q96T17 732 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 PPP1R16BQ96T49 567 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 NELL2Q99435 816 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 OSMRQ99650 979 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 MXRA8Q9BRK3 442 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 DSCC1Q9BVC3 393 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 FAM126AQ9BYI3 521 aaPredicted RBP2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 RHOBTB2Q9BYZ6 727 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 OSBPL6Q9BZF3 934 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZBP1Q9H171 429 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 EPC1Q9H2F5 836 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 PSTPIP2Q9H939 334 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 WDR6Q9NNW5 1121 aaKnown RBP2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 SLC2A4RGQ9NR83 387 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 SH2B1Q9NRF2 756 aaPredicted RBP2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 MRPL17Q9NRX2 175 aaKnown RBP2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 KCNH7Q9NS40 1196 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 RNF19AQ9NV58 838 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZSCAN32Q9NX65 697 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 DACT1Q9NYF0 836 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 EPS15L1Q9UBC2 864 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 SEC63Q9UGP8 760 aaKnown RBP2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 RAB23Q9ULC3 237 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 CEP131Q9UPN4 1083 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 SMG5Q9UPR3 1016 aaKnown RBP2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 SSX2IPQ9Y2D8 614 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 UBIAD1Q9Y5Z9 338 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 RALGAPA2Q2PPJ7 1873 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 COL1A2P08123 1366 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 SPTA1P02549 2419 aa2.7□□□□□ -1.98
RNU4-53P-201ENST00000410828 KAT6AQ92794 2004 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms