RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 PCDHA11Q9Y5I1 949 aa12.14□□□□□ -0.47
CHMP3-205ENST00000409810 COL4A3BPQ9Y5P4 624 aa12.14□□□□□ -0.47
CHMP3-205ENST00000409810 GRXCR1A8MXD5 290 aa12.13□□□□□ -0.47
CHMP3-205ENST00000409810 ZBTB39O15060 712 aa12.13□□□□□ -0.47
CHMP3-205ENST00000409810 SFPQP23246 707 aaKnown RBP eCLIP12.13□□□□□ -0.47
CHMP3-205ENST00000409810 EIF4BP23588 611 aaKnown RBP12.13□□□□□ -0.47
CHMP3-205ENST00000409810 DEFB103AP81534 67 aa12.13□□□□□ -0.47
CHMP3-205ENST00000409810 MKRN4PQ13434 485 aaPredicted RBP12.13□□□□□ -0.47
CHMP3-205ENST00000409810 DRP2Q13474 957 aa12.13□□□□□ -0.47
CHMP3-205ENST00000409810 TFDP1Q14186 410 aa12.13□□□□□ -0.47
CHMP3-205ENST00000409810 TCTN1Q2MV58 587 aa12.13□□□□□ -0.47
CHMP3-205ENST00000409810 FAM109BQ6ICB4 259 aaPredicted RBP12.13□□□□□ -0.47
CHMP3-205ENST00000409810 FAM228AQ86W67 206 aa12.13□□□□□ -0.47
CHMP3-205ENST00000409810 HERC6Q8IVU3 1022 aa12.13□□□□□ -0.47
CHMP3-205ENST00000409810 ZNF579Q8NAF0 562 aaKnown RBP12.13□□□□□ -0.47
CHMP3-205ENST00000409810 RASSF8Q8NHQ8 419 aa12.13□□□□□ -0.47
CHMP3-205ENST00000409810 CALML4Q96GE6 196 aa12.13□□□□□ -0.47
CHMP3-205ENST00000409810 NLRP4Q96MN2 994 aa12.13□□□□□ -0.47
CHMP3-205ENST00000409810 ZBED2Q9BTP6 218 aa12.13□□□□□ -0.47
CHMP3-205ENST00000409810 PBX4Q9BYU1 374 aa12.13□□□□□ -0.47
CHMP3-205ENST00000409810 OSBPL7Q9BZF2 842 aa12.13□□□□□ -0.47
CHMP3-205ENST00000409810 ERVK-5Q9HDB9 667 aa12.13□□□□□ -0.47
CHMP3-205ENST00000409810 BMP2KQ9NSY1 1161 aaPredicted RBP12.13□□□□□ -0.47
CHMP3-205ENST00000409810 DDX19AQ9NUU7 478 aaKnown RBP12.13□□□□□ -0.47
CHMP3-205ENST00000409810 NOC2LQ9Y3T9 749 aaKnown RBP12.13□□□□□ -0.47
CHMP3-205ENST00000409810 CLIC4Q9Y696 253 aa12.13□□□□□ -0.47
CHMP3-205ENST00000409810 MORC2Q9Y6X9 1032 aaPredicted RBP12.13□□□□□ -0.47
CHMP3-205ENST00000409810 SZT2Q5T011 3432 aa12.12□□□□□ -0.47
CHMP3-205ENST00000409810 TCHHQ07283 1943 aa12.12□□□□□ -0.47
CHMP3-205ENST00000409810 A0A087WZ62 844 aa12.12□□□□□ -0.47
CHMP3-205ENST00000409810 DENND3A2RUS2 1198 aa12.12□□□□□ -0.47
CHMP3-205ENST00000409810 PP2D1A8MPX8 630 aa12.12□□□□□ -0.47
CHMP3-205ENST00000409810 TLL1O43897 1013 aa12.12□□□□□ -0.47
CHMP3-205ENST00000409810 GJB5O95377 273 aa12.12□□□□□ -0.47
CHMP3-205ENST00000409810 EYA4O95677 639 aa12.12□□□□□ -0.47
CHMP3-205ENST00000409810 DARSP14868 501 aaKnown RBP12.12□□□□□ -0.47
CHMP3-205ENST00000409810 ZSCAN20P17040 1043 aaPredicted RBP12.12□□□□□ -0.47
CHMP3-205ENST00000409810 TXLNAP40222 546 aa12.12□□□□□ -0.47
CHMP3-205ENST00000409810 UBA7P41226 1012 aa12.12□□□□□ -0.47
CHMP3-205ENST00000409810 CEBPZQ03701 1054 aaKnown RBP12.12□□□□□ -0.47
CHMP3-205ENST00000409810 STK38Q15208 465 aa12.12□□□□□ -0.47
CHMP3-205ENST00000409810 PTPAQ15257 358 aa12.12□□□□□ -0.47
CHMP3-205ENST00000409810 ZRSR1Q15695 479 aaKnown RBP12.12□□□□□ -0.47
CHMP3-205ENST00000409810 ECM1Q16610 540 aa12.12□□□□□ -0.47
CHMP3-205ENST00000409810 HYIQ5T013 277 aa12.12□□□□□ -0.47
CHMP3-205ENST00000409810 FOXD4L5Q5VV16 416 aaPredicted RBP12.12□□□□□ -0.47
CHMP3-205ENST00000409810 ATL3Q6DD88 541 aa12.12□□□□□ -0.47
CHMP3-205ENST00000409810 FAM173BQ6P4H8 233 aa12.12□□□□□ -0.47
CHMP3-205ENST00000409810 PADI6Q6TGC4 694 aa12.12□□□□□ -0.47
CHMP3-205ENST00000409810 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.12□□□□□ -0.47
CHMP3-205ENST00000409810 SRGAP1Q7Z6B7 1085 aa12.12□□□□□ -0.47
CHMP3-205ENST00000409810 CABP7Q86V35 215 aa12.12□□□□□ -0.47
CHMP3-205ENST00000409810 TMEM40Q8WWA1 233 aa12.12□□□□□ -0.47
CHMP3-205ENST00000409810 FOXD4L4Q8WXT5 416 aaPredicted RBP12.12□□□□□ -0.47
CHMP3-205ENST00000409810 TMEM143Q96AN5 459 aa12.12□□□□□ -0.47
CHMP3-205ENST00000409810 USP28Q96RU2 1077 aa12.12□□□□□ -0.47
CHMP3-205ENST00000409810 FDXACB1Q9BRP7 624 aaPredicted RBP12.12□□□□□ -0.47
CHMP3-205ENST00000409810 TSPYL2Q9H2G4 693 aaPredicted RBP12.12□□□□□ -0.47
CHMP3-205ENST00000409810 CDHR5Q9HBB8 845 aa12.12□□□□□ -0.47
CHMP3-205ENST00000409810 C1orf112Q9NSG2 853 aa12.12□□□□□ -0.47
CHMP3-205ENST00000409810 ST3GAL5Q9UNP4 418 aa12.12□□□□□ -0.47
CHMP3-205ENST00000409810 NLRC5Q86WI3 1866 aa12.11□□□□□ -0.47
CHMP3-205ENST00000409810 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.11□□□□□ -0.47
CHMP3-205ENST00000409810 STAG3L1P0CL83 205 aa12.11□□□□□ -0.47
CHMP3-205ENST00000409810 CYP11B2P19099 503 aa12.11□□□□□ -0.47
CHMP3-205ENST00000409810 MARCKSP29966 332 aaPredicted RBP12.11□□□□□ -0.47
CHMP3-205ENST00000409810 CDC25AP30304 524 aa12.11□□□□□ -0.47
CHMP3-205ENST00000409810 PBX2P40425 430 aa12.11□□□□□ -0.47
CHMP3-205ENST00000409810 PHKA2P46019 1235 aa12.11□□□□□ -0.47
CHMP3-205ENST00000409810 NASPP49321 788 aaPredicted RBP12.11□□□□□ -0.47
CHMP3-205ENST00000409810 RABGGTBP53611 331 aa12.11□□□□□ -0.47
CHMP3-205ENST00000409810 LAMTOR4Q0VGL1 99 aa12.11□□□□□ -0.47
CHMP3-205ENST00000409810 PCBP1Q15365 356 aaKnown RBP eCLIP12.11□□□□□ -0.47
CHMP3-205ENST00000409810 KRI1Q8N9T8 703 aaKnown RBP12.11□□□□□ -0.47
CHMP3-205ENST00000409810 RNF149Q8NC42 400 aa12.11□□□□□ -0.47
CHMP3-205ENST00000409810 PRPF31Q8WWY3 499 aaKnown RBP12.11□□□□□ -0.47
CHMP3-205ENST00000409810 TOP1MTQ969P6 601 aa12.11□□□□□ -0.47
CHMP3-205ENST00000409810 ZNF668Q96K58 619 aaPredicted RBP12.11□□□□□ -0.47
CHMP3-205ENST00000409810 RAD9AQ99638 391 aa12.11□□□□□ -0.47
CHMP3-205ENST00000409810 MMTAG2Q9BU76 263 aaKnown RBP12.11□□□□□ -0.47
CHMP3-205ENST00000409810 POLR3FQ9H1D9 316 aaPredicted RBP12.11□□□□□ -0.47
CHMP3-205ENST00000409810 BHMT2Q9H2M3 363 aa12.11□□□□□ -0.47
CHMP3-205ENST00000409810 SLC28A3Q9HAS3 691 aa12.11□□□□□ -0.47
CHMP3-205ENST00000409810 XPNPEP1Q9NQW7 623 aa12.11□□□□□ -0.47
CHMP3-205ENST00000409810 DACT1Q9NYF0 836 aa12.11□□□□□ -0.47
CHMP3-205ENST00000409810 CFAP45Q9UL16 551 aa12.11□□□□□ -0.47
CHMP3-205ENST00000409810 INSL6Q9Y581 213 aa12.11□□□□□ -0.47
CHMP3-205ENST00000409810 ATP6V1DQ9Y5K8 247 aa12.11□□□□□ -0.47
CHMP3-205ENST00000409810 SRPRBQ9Y5M8 271 aaKnown RBP12.11□□□□□ -0.47
CHMP3-205ENST00000409810 RALGAPA2Q2PPJ7 1873 aa12.1□□□□□ -0.47
CHMP3-205ENST00000409810 A0A087WWV3 80 aa12.1□□□□□ -0.47
CHMP3-205ENST00000409810 ENPP3O14638 875 aa12.1□□□□□ -0.47
CHMP3-205ENST00000409810 YEATS4O95619 227 aa12.1□□□□□ -0.47
CHMP3-205ENST00000409810 SRGAP2CP0DJJ0 459 aa12.1□□□□□ -0.47
CHMP3-205ENST00000409810 ARL2P36404 184 aa12.1□□□□□ -0.47
CHMP3-205ENST00000409810 POU5F1BQ06416 359 aa12.1□□□□□ -0.47
CHMP3-205ENST00000409810 SLC39A14Q15043 492 aa12.1□□□□□ -0.47
CHMP3-205ENST00000409810 PPP2R5AQ15172 486 aa12.1□□□□□ -0.47
CHMP3-205ENST00000409810 FAM102BQ5T8I3 360 aa12.1□□□□□ -0.47
CHMP3-205ENST00000409810 PPP2R2DQ66LE6 453 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms