RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 LARSQ9P2J5 1176 aaKnown RBP18.6■□□□□ 0.57
SSB-202ENST00000409333 IGKV6-21A0A0C4DH24 114 aa18.6■□□□□ 0.57
SSB-202ENST00000409333 C22orf31O95567 290 aa18.6■□□□□ 0.57
SSB-202ENST00000409333 PEX3P56589 373 aa18.6■□□□□ 0.57
SSB-202ENST00000409333 PAK1Q13153 545 aa18.6■□□□□ 0.57
SSB-202ENST00000409333 MKRN4PQ13434 485 aaPredicted RBP18.6■□□□□ 0.57
SSB-202ENST00000409333 STIM1Q13586 685 aa18.6■□□□□ 0.57
SSB-202ENST00000409333 GRIK4Q16099 956 aa18.6■□□□□ 0.57
SSB-202ENST00000409333 SLC9C1Q4G0N8 1177 aa18.6■□□□□ 0.57
SSB-202ENST00000409333 LHX8Q68G74 356 aa18.6■□□□□ 0.57
SSB-202ENST00000409333 CXCL17Q6UXB2 119 aa18.6■□□□□ 0.57
SSB-202ENST00000409333 EPM2AIP1Q7L775 607 aaPredicted RBP18.6■□□□□ 0.57
SSB-202ENST00000409333 SCFD1Q8WVM8 642 aa18.6■□□□□ 0.57
SSB-202ENST00000409333 NELFBQ8WX92 580 aa18.6■□□□□ 0.57
SSB-202ENST00000409333 GRPEL1Q9HAV7 217 aa18.6■□□□□ 0.57
SSB-202ENST00000409333 TRIM49BA6NDI0 452 aa18.59■□□□□ 0.57
SSB-202ENST00000409333 GCNT3O95395 438 aa18.59■□□□□ 0.57
SSB-202ENST00000409333 SMIM10L2AP0DMW4 78 aa18.59■□□□□ 0.57
SSB-202ENST00000409333 SMIM10L2BP0DMW5 78 aa18.59■□□□□ 0.57
SSB-202ENST00000409333 CST5P28325 142 aaPredicted RBP18.59■□□□□ 0.57
SSB-202ENST00000409333 ERCC5P28715 1186 aaPredicted RBP18.59■□□□□ 0.57
SSB-202ENST00000409333 ARL2P36404 184 aa18.59■□□□□ 0.57
SSB-202ENST00000409333 PMS1P54277 932 aaKnown RBP18.59■□□□□ 0.57
SSB-202ENST00000409333 NCAPHQ15003 741 aa18.59■□□□□ 0.57
SSB-202ENST00000409333 CT47A1Q5JQC4 288 aaPredicted RBP18.59■□□□□ 0.57
SSB-202ENST00000409333 MYOCDQ8IZQ8 938 aa18.59■□□□□ 0.57
SSB-202ENST00000409333 GUF1Q8N442 669 aaKnown RBP18.59■□□□□ 0.57
SSB-202ENST00000409333 ASAP3Q8TDY4 903 aa18.59■□□□□ 0.57
SSB-202ENST00000409333 KATNAL1Q9BW62 490 aa18.59■□□□□ 0.57
SSB-202ENST00000409333 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.59■□□□□ 0.57
SSB-202ENST00000409333 UNC93B1Q9H1C4 597 aa18.59■□□□□ 0.57
SSB-202ENST00000409333 SUGCTQ9HAC7 445 aa18.59■□□□□ 0.57
SSB-202ENST00000409333 K7ENM7 598 aa18.58■□□□□ 0.57
SSB-202ENST00000409333 PSMA7O14818 248 aa18.58■□□□□ 0.57
SSB-202ENST00000409333 MSCO60682 206 aa18.58■□□□□ 0.57
SSB-202ENST00000409333 KPNA6O60684 536 aa18.58■□□□□ 0.57
SSB-202ENST00000409333 MYCP01106 439 aaPredicted RBP18.58■□□□□ 0.57
SSB-202ENST00000409333 ASGR1P07306 291 aa18.58■□□□□ 0.57
SSB-202ENST00000409333 RTP1P59025 263 aa18.58■□□□□ 0.57
SSB-202ENST00000409333 MYL5Q02045 173 aa18.58■□□□□ 0.57
SSB-202ENST00000409333 DMP1Q13316 513 aaPredicted RBP18.58■□□□□ 0.57
SSB-202ENST00000409333 KCNA10Q16322 511 aa18.58■□□□□ 0.57
SSB-202ENST00000409333 ZC2HC1CQ53FD0 456 aaPredicted RBP18.58■□□□□ 0.57
SSB-202ENST00000409333 MARCH8Q5T0T0 291 aa18.58■□□□□ 0.57
SSB-202ENST00000409333 L1TD1Q5T7N2 865 aaKnown RBP18.58■□□□□ 0.57
SSB-202ENST00000409333 CCSAPQ6IQ19 270 aaPredicted RBP18.58■□□□□ 0.57
SSB-202ENST00000409333 ZNF720Q7Z2F6 126 aa18.58■□□□□ 0.57
SSB-202ENST00000409333 CTU1Q7Z7A3 348 aaKnown RBP18.58■□□□□ 0.57
SSB-202ENST00000409333 LMBR1Q8WVP7 490 aa18.58■□□□□ 0.57
SSB-202ENST00000409333 MTG1Q9BT17 334 aaPredicted RBP18.58■□□□□ 0.57
SSB-202ENST00000409333 KIFC3Q9BVG8 833 aa18.58■□□□□ 0.57
SSB-202ENST00000409333 SETD4Q9NVD3 440 aa18.58■□□□□ 0.57
SSB-202ENST00000409333 CCDC169A6NNP5 214 aa18.58■□□□□ 0.56
SSB-202ENST00000409333 BECN2A8MW95 431 aa18.58■□□□□ 0.56
SSB-202ENST00000409333 ZEB2O60315 1214 aa18.58■□□□□ 0.56
SSB-202ENST00000409333 PRPF6O94906 941 aaKnown RBP18.58■□□□□ 0.56
SSB-202ENST00000409333 GLRA2P23416 452 aa18.58■□□□□ 0.56
SSB-202ENST00000409333 KLRC1P26715 233 aa18.58■□□□□ 0.56
SSB-202ENST00000409333 NPTX2P47972 431 aa18.58■□□□□ 0.56
SSB-202ENST00000409333 CLCN3P51790 818 aa18.58■□□□□ 0.56
SSB-202ENST00000409333 HIC1Q14526 733 aa18.58■□□□□ 0.56
SSB-202ENST00000409333 MTFR1Q15390 333 aa18.58■□□□□ 0.56
SSB-202ENST00000409333 EFCAB12Q6NXP0 572 aa18.58■□□□□ 0.56
SSB-202ENST00000409333 KSR1Q8IVT5 923 aa18.58■□□□□ 0.56
SSB-202ENST00000409333 NELFCDQ8IXH7 590 aa18.58■□□□□ 0.56
SSB-202ENST00000409333 METTL13Q8N6R0 699 aa18.58■□□□□ 0.56
SSB-202ENST00000409333 DHTKD1Q96HY7 919 aaPredicted RBP18.58■□□□□ 0.56
SSB-202ENST00000409333 SEMA6BQ9H3T3 888 aa18.58■□□□□ 0.56
SSB-202ENST00000409333 C17orf75Q9HAS0 396 aa18.58■□□□□ 0.56
SSB-202ENST00000409333 RWDD2AQ9UIY3 292 aa18.58■□□□□ 0.56
SSB-202ENST00000409333 ADGRA3Q8IWK6 1321 aa18.57■□□□□ 0.56
SSB-202ENST00000409333 IKBKBO14920 756 aa18.57■□□□□ 0.56
SSB-202ENST00000409333 SLC16A4O15374 487 aa18.57■□□□□ 0.56
SSB-202ENST00000409333 PPP1R37O75864 691 aa18.57■□□□□ 0.56
SSB-202ENST00000409333 HOXD13P35453 343 aa18.57■□□□□ 0.56
SSB-202ENST00000409333 PPP1R2P41236 205 aa18.57■□□□□ 0.56
SSB-202ENST00000409333 NCKAP1LP55160 1127 aa18.57■□□□□ 0.56
SSB-202ENST00000409333 KCNA1Q09470 495 aa18.57■□□□□ 0.56
SSB-202ENST00000409333 MTHFD1LQ6UB35 978 aa18.57■□□□□ 0.56
SSB-202ENST00000409333 EXOC8Q8IYI6 725 aa18.57■□□□□ 0.56
SSB-202ENST00000409333 ENOX1Q8TC92 643 aaKnown RBP18.57■□□□□ 0.56
SSB-202ENST00000409333 P2RX5Q93086 422 aa18.57■□□□□ 0.56
SSB-202ENST00000409333 GAS2O43903 313 aaKnown RBP18.56■□□□□ 0.56
SSB-202ENST00000409333 GJB1P08034 283 aa18.56■□□□□ 0.56
SSB-202ENST00000409333 MAPTP10636 758 aaKnown RBP18.56■□□□□ 0.56
SSB-202ENST00000409333 CCNE1P24864 410 aa18.56■□□□□ 0.56
SSB-202ENST00000409333 CTCFP49711 727 aaPredicted RBP18.56■□□□□ 0.56
SSB-202ENST00000409333 BMT2Q1RMZ1 405 aa18.56■□□□□ 0.56
SSB-202ENST00000409333 IER5Q5VY09 327 aa18.56■□□□□ 0.56
SSB-202ENST00000409333 RNF180Q86T96 592 aa18.56■□□□□ 0.56
SSB-202ENST00000409333 LINC01465Q8N7H1 131 aa18.56■□□□□ 0.56
SSB-202ENST00000409333 ZNF507Q8TCN5 953 aa18.56■□□□□ 0.56
SSB-202ENST00000409333 TCP11Q8WWU5 503 aa18.56■□□□□ 0.56
SSB-202ENST00000409333 PRPF31Q8WWY3 499 aaKnown RBP18.56■□□□□ 0.56
SSB-202ENST00000409333 IFT74Q96LB3 600 aa18.56■□□□□ 0.56
SSB-202ENST00000409333 JPH2Q9BR39 696 aaPredicted RBP18.56■□□□□ 0.56
SSB-202ENST00000409333 STRA6Q9BX79 667 aa18.56■□□□□ 0.56
SSB-202ENST00000409333 HSD3B7Q9H2F3 369 aa18.56■□□□□ 0.56
SSB-202ENST00000409333 KMT5AQ9NQR1 393 aa18.56■□□□□ 0.56
SSB-202ENST00000409333 NRCAMQ92823 1304 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms