RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 ARFGAP3Q9NP61 516 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 MEGF6O75095 1541 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 CXCL11O14625 94 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 HBP1O60381 514 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 ATP2C2O75185 946 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 LMNB2Q03252 620 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 RAD51Q06609 339 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 MESDQ14696 234 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 CCDC6Q16204 474 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 CDO1Q16878 200 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 ZNF467Q7Z7K2 595 aaPredicted RBP5.4□□□□□ -1.54
SCN3A-203ENST00000409101 RPUSD2Q8IZ73 545 aaKnown RBP5.4□□□□□ -1.54
SCN3A-203ENST00000409101 IFT43Q96FT9 208 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 ABCF3Q9NUQ8 709 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 ZNF148Q9UQR1 794 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 SH3BP1Q9Y3L3 701 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 ERICH4A6NGS2 130 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 E9PMD0 336 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 KCNK3O14649 394 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 PQBP1O60828 265 aaKnown RBP5.4□□□□□ -1.54
SCN3A-203ENST00000409101 GSTA1P08263 222 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 GSTA2P09210 222 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 SLFN14P0C7P3 912 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 RAG1P15918 1043 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 EEF1GP26641 437 aaKnown RBP5.4□□□□□ -1.54
SCN3A-203ENST00000409101 SOX5P35711 763 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 ALDH1A3P47895 512 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 NOLC1Q14978 699 aaKnown RBP eCLIP5.4□□□□□ -1.54
SCN3A-203ENST00000409101 BZW1Q7L1Q6 419 aaKnown RBP5.4□□□□□ -1.54
SCN3A-203ENST00000409101 XXYLT1Q8NBI6 393 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 TIGD1Q96MW7 591 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 LCMT1Q9UIC8 334 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 PCDHB12Q9Y5F1 795 aa5.4□□□□□ -1.54
SCN3A-203ENST00000409101 GFPT2O94808 682 aa5.4□□□□□ -1.55
SCN3A-203ENST00000409101 KRT15P19012 456 aa5.4□□□□□ -1.55
SCN3A-203ENST00000409101 TBXAS1P24557 533 aaPredicted RBP5.4□□□□□ -1.55
SCN3A-203ENST00000409101 PSMA2P25787 234 aa5.4□□□□□ -1.55
SCN3A-203ENST00000409101 EMC2Q15006 297 aa5.4□□□□□ -1.55
SCN3A-203ENST00000409101 RGMBQ6NW40 437 aa5.4□□□□□ -1.55
SCN3A-203ENST00000409101 DEFB128Q7Z7B8 93 aa5.4□□□□□ -1.55
SCN3A-203ENST00000409101 HSPH1Q92598 858 aa5.4□□□□□ -1.55
SCN3A-203ENST00000409101 TNIP3Q96KP6 325 aa5.4□□□□□ -1.55
SCN3A-203ENST00000409101 AGBL1Q96MI9 1066 aa5.4□□□□□ -1.55
SCN3A-203ENST00000409101 THAP9Q9H5L6 903 aa5.4□□□□□ -1.55
SCN3A-203ENST00000409101 HIP1RO75146 1068 aa5.4□□□□□ -1.55
SCN3A-203ENST00000409101 CD4P01730 458 aa5.4□□□□□ -1.55
SCN3A-203ENST00000409101 CDC25AP30304 524 aa5.4□□□□□ -1.55
SCN3A-203ENST00000409101 EFCAB12Q6NXP0 572 aa5.4□□□□□ -1.55
SCN3A-203ENST00000409101 POTEAQ6S8J7 498 aa5.4□□□□□ -1.55
SCN3A-203ENST00000409101 PHLDB2Q86SQ0 1253 aa5.4□□□□□ -1.55
SCN3A-203ENST00000409101 MB21D2Q8IYB1 491 aaPredicted RBP5.4□□□□□ -1.55
SCN3A-203ENST00000409101 REM2Q8IYK8 340 aaPredicted RBP5.4□□□□□ -1.55
SCN3A-203ENST00000409101 DNAAF3Q8N9W5 541 aa5.4□□□□□ -1.55
SCN3A-203ENST00000409101 PAGE5Q96GU1 130 aa5.4□□□□□ -1.55
SCN3A-203ENST00000409101 PSMB7Q99436 277 aa5.4□□□□□ -1.55
SCN3A-203ENST00000409101 MOV10L1Q9BXT6 1211 aaKnown RBP5.4□□□□□ -1.55
SCN3A-203ENST00000409101 TRPV6Q9H1D0 765 aa5.4□□□□□ -1.55
SCN3A-203ENST00000409101 PLCB1Q9NQ66 1216 aa5.4□□□□□ -1.55
SCN3A-203ENST00000409101 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.4□□□□□ -1.55
SCN3A-203ENST00000409101 DPP7Q9UHL4 492 aa5.4□□□□□ -1.55
SCN3A-203ENST00000409101 RWDD2AQ9UIY3 292 aa5.4□□□□□ -1.55
SCN3A-203ENST00000409101 SCINQ9Y6U3 715 aa5.4□□□□□ -1.55
SCN3A-203ENST00000409101 KIF1AQ12756 1690 aa5.4□□□□□ -1.55
SCN3A-203ENST00000409101 POTECB2RU33 542 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 KRIT1O00522 736 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 BRD1O95696 1058 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 TUBBP07437 444 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 IQCB1Q15051 598 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 RPS6KA2Q15349 733 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 GLYCTKQ8IVS8 523 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 TRIM58Q8NG06 486 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 SPZ1Q9BXG8 430 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 CLGNO14967 610 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 MAFGO15525 162 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 CIB2O75838 187 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 ICAM1P05362 532 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 IRF1P10914 325 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 DYNLT1P63172 113 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 NOGQ13253 232 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 MTMR3Q13615 1198 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 PPP2R5EQ16537 467 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 PAN2Q504Q3 1202 aaKnown RBP5.39□□□□□ -1.55
SCN3A-203ENST00000409101 UNC13DQ70J99 1090 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 STAG2Q8N3U4 1231 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 ATRIPQ8WXE1 791 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 TMEM143Q96AN5 459 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 MTG1Q9BT17 334 aaPredicted RBP5.39□□□□□ -1.55
SCN3A-203ENST00000409101 TYW1Q9NV66 732 aaKnown RBP5.39□□□□□ -1.55
SCN3A-203ENST00000409101 AGO2Q9UKV8 859 aaKnown RBP5.39□□□□□ -1.55
SCN3A-203ENST00000409101 STAP1Q9ULZ2 295 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 DOLKQ9UPQ8 538 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 TACC3Q9Y6A5 838 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 ZC3H4Q9UPT8 1303 aaKnown RBP5.39□□□□□ -1.55
SCN3A-203ENST00000409101 PI4K2BG5E9Z4 385 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 KIAA0391O15091 583 aaKnown RBP5.39□□□□□ -1.55
SCN3A-203ENST00000409101 ARHGAP6O43182 974 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 MOCS2O96007 188 aaPredicted RBP5.39□□□□□ -1.55
SCN3A-203ENST00000409101 KLRK1P26718 216 aa5.39□□□□□ -1.55
SCN3A-203ENST00000409101 TCF7P36402 384 aaPredicted RBP5.39□□□□□ -1.55
SCN3A-203ENST00000409101 ADKP55263 362 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms