RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 HLA-DPA1P20036 260 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 MAP3K10Q02779 954 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 ZC3H18Q86VM9 953 aaKnown RBP12.85□□□□□ -0.35
SMCR8-201ENST00000406438 MAP4K1Q92918 833 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 FAM167AQ96KS9 214 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 DPYSL4O14531 572 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 RBBP7Q16576 425 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 ERFEQ4G0M1 354 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 TTC23LQ6PF05 361 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 NUDCD3Q8IVD9 361 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 KRT38O76015 456 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 DYNLL1P63167 89 aaKnown RBP12.85□□□□□ -0.35
SMCR8-201ENST00000406438 HDLBPQ00341 1268 aaKnown RBP12.85□□□□□ -0.35
SMCR8-201ENST00000406438 SCN4BQ8IWT1 228 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 TEKT4Q8WW24 435 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 PAWRQ96IZ0 340 aaKnown RBP12.85□□□□□ -0.35
SMCR8-201ENST00000406438 TRIM54Q9BYV2 358 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 ATP6V0A4Q9HBG4 840 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 ANKARQ7Z5J8 1434 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 ATP7BP35670 1465 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 TBXAS1P24557 533 aaPredicted RBP12.85□□□□□ -0.35
SMCR8-201ENST00000406438 PROM2Q8N271 834 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 BEST2Q8NFU1 509 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 G3BP2Q9UN86 482 aaKnown RBP12.85□□□□□ -0.35
SMCR8-201ENST00000406438 RASA4BC9J798 803 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 RASA4O43374 803 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 EFTUD2Q15029 972 aaKnown RBP eCLIP12.85□□□□□ -0.35
SMCR8-201ENST00000406438 MCPH1Q8NEM0 835 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 TTC17Q96AE7 1141 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 ARHGEF5Q12774 1597 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 MKRN3Q13064 507 aaKnown RBP12.85□□□□□ -0.35
SMCR8-201ENST00000406438 GRAMD4Q6IC98 578 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 NUDT18Q6ZVK8 323 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 SYT2Q8N9I0 419 aaPredicted RBP12.85□□□□□ -0.35
SMCR8-201ENST00000406438 TMEM60Q9H2L4 133 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 NDST4Q9H3R1 872 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 EML4Q9HC35 981 aaKnown RBP12.85□□□□□ -0.35
SMCR8-201ENST00000406438 SARS2Q9NP81 518 aaKnown RBP12.85□□□□□ -0.35
SMCR8-201ENST00000406438 PZPP20742 1482 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 PRPF3O43395 683 aaKnown RBP12.85□□□□□ -0.35
SMCR8-201ENST00000406438 NT5C2P49902 561 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 SPTLC3Q9NUV7 552 aa12.85□□□□□ -0.35
SMCR8-201ENST00000406438 AP1B1Q10567 949 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 WASHC5Q12768 1159 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 ZNF467Q7Z7K2 595 aaPredicted RBP12.84□□□□□ -0.35
SMCR8-201ENST00000406438 TADA2BQ86TJ2 420 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 ACAP3Q96P50 834 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 DYRK4Q9NR20 520 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 ATG3Q9NT62 314 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 MYO1DO94832 1006 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 ZRANB2O95218 330 aaKnown RBP eCLIP12.84□□□□□ -0.35
SMCR8-201ENST00000406438 GUCY2CP25092 1073 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 VCPP55072 806 aaKnown RBP12.84□□□□□ -0.35
SMCR8-201ENST00000406438 OR9Q1Q8NGQ5 310 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 DCAF4Q8WV16 495 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 SP110Q9HB58 689 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 SAYSD1Q9NPB0 183 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 GDAQ9Y2T3 454 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 A0A0G2JND7 137 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 PIK3R2O00459 728 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 ZNF568Q3ZCX4 644 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 TEDDM1Q5T9Z0 273 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 SLC26A7Q8TE54 656 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 DBNLQ9UJU6 430 aaKnown RBP12.84□□□□□ -0.35
SMCR8-201ENST00000406438 SNX5Q9Y5X3 404 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 FGGP02679 453 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 DAB2P98082 770 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 UBE2SQ16763 222 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 ADAM22Q9P0K1 906 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 SH2B2O14492 632 aaPredicted RBP12.84□□□□□ -0.35
SMCR8-201ENST00000406438 KITP10721 976 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 HADHAP40939 763 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 AP2B1P63010 937 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 NFX1Q12986 1120 aaKnown RBP12.84□□□□□ -0.35
SMCR8-201ENST00000406438 NR5A1Q13285 461 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 TMEM179Q6ZVK1 233 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 GRAMD1CQ8IYS0 662 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 EFHBQ8N7U6 833 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 IL17REQ8NFR9 667 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 TDRD7Q8NHU6 1098 aaKnown RBP12.84□□□□□ -0.35
SMCR8-201ENST00000406438 DACH2Q96NX9 599 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 GRIN1Q05586 938 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 NUGGCQ68CJ6 796 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 HOXC10Q9NYD6 342 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 ZSWIM5Q9P217 1185 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 PPARGC1AQ9UBK2 798 aaKnown RBP12.84□□□□□ -0.35
SMCR8-201ENST00000406438 NOVA2Q9UNW9 492 aaKnown RBP12.84□□□□□ -0.35
SMCR8-201ENST00000406438 HECW2Q9P2P5 1572 aa12.84□□□□□ -0.35
SMCR8-201ENST00000406438 ARHGEF9O43307 516 aa12.83□□□□□ -0.35
SMCR8-201ENST00000406438 EIF2AK2P19525 551 aaKnown RBP12.83□□□□□ -0.35
SMCR8-201ENST00000406438 CDK8P49336 464 aa12.83□□□□□ -0.35
SMCR8-201ENST00000406438 PASD1Q8IV76 773 aa12.83□□□□□ -0.35
SMCR8-201ENST00000406438 SELENONQ9NZV5 590 aa12.83□□□□□ -0.35
SMCR8-201ENST00000406438 NRBP1Q9UHY1 535 aa12.83□□□□□ -0.35
SMCR8-201ENST00000406438 UBE4BO95155 1302 aa12.83□□□□□ -0.35
SMCR8-201ENST00000406438 USP17L8P0C7I0 530 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 RXRBP28702 533 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 GPC3P51654 580 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 POLE2P56282 527 aa12.83□□□□□ -0.36
SMCR8-201ENST00000406438 ACCSLQ4AC99 568 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms