RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 TMOD1P28289 359 aa23.85■■□□□ 1.41
RHBDD3-202ENST00000406335 FAM189BP81408 668 aa23.85■■□□□ 1.41
RHBDD3-202ENST00000406335 TOB2Q14106 344 aaPredicted RBP23.85■■□□□ 1.41
RHBDD3-202ENST00000406335 NIPA1Q7RTP0 329 aa23.85■■□□□ 1.41
RHBDD3-202ENST00000406335 TEX2Q8IWB9 1127 aa23.85■■□□□ 1.41
RHBDD3-202ENST00000406335 LRRC43Q8N309 656 aa23.85■■□□□ 1.41
RHBDD3-202ENST00000406335 SPG21Q9NZD8 308 aa23.85■■□□□ 1.41
RHBDD3-202ENST00000406335 WDFY4Q6ZS81 3184 aa23.84■■□□□ 1.41
RHBDD3-202ENST00000406335 hCG_1984214I3L0E3 225 aa23.84■■□□□ 1.41
RHBDD3-202ENST00000406335 PSAPP07602 524 aa23.84■■□□□ 1.41
RHBDD3-202ENST00000406335 PBX3P40426 434 aa23.84■■□□□ 1.41
RHBDD3-202ENST00000406335 SYCE2Q6PIF2 218 aa23.84■■□□□ 1.41
RHBDD3-202ENST00000406335 ZNF713Q8N859 430 aaPredicted RBP23.84■■□□□ 1.41
RHBDD3-202ENST00000406335 KREMEN2Q8NCW0 462 aa23.84■■□□□ 1.41
RHBDD3-202ENST00000406335 RASGRP4Q8TDF6 673 aa23.84■■□□□ 1.41
RHBDD3-202ENST00000406335 CASD1Q96PB1 797 aa23.84■■□□□ 1.41
RHBDD3-202ENST00000406335 LARP6Q9BRS8 491 aaKnown RBP23.84■■□□□ 1.41
RHBDD3-202ENST00000406335 TBC1D22BQ9NU19 505 aa23.84■■□□□ 1.41
RHBDD3-202ENST00000406335 BARHL2Q9NY43 387 aa23.84■■□□□ 1.41
RHBDD3-202ENST00000406335 ATG2AQ2TAZ0 1938 aa23.83■■□□□ 1.41
RHBDD3-202ENST00000406335 CCDC196A0A1B0GTZ2 297 aa23.83■■□□□ 1.41
RHBDD3-202ENST00000406335 MAGEB2O15479 319 aa23.83■■□□□ 1.41
RHBDD3-202ENST00000406335 GPR32O75388 356 aa23.83■■□□□ 1.41
RHBDD3-202ENST00000406335 C22orf31O95567 290 aa23.83■■□□□ 1.41
RHBDD3-202ENST00000406335 NLRP11P59045 1033 aaKnown RBP23.83■■□□□ 1.41
RHBDD3-202ENST00000406335 CCT2P78371 535 aaKnown RBP23.83■■□□□ 1.41
RHBDD3-202ENST00000406335 MTMR3Q13615 1198 aa23.83■■□□□ 1.41
RHBDD3-202ENST00000406335 SMC1AQ14683 1233 aaKnown RBP23.83■■□□□ 1.41
RHBDD3-202ENST00000406335 EFCAB12Q6NXP0 572 aa23.83■■□□□ 1.41
RHBDD3-202ENST00000406335 TM6SF1Q9BZW5 370 aa23.83■■□□□ 1.41
RHBDD3-202ENST00000406335 NCOA5Q9HCD5 579 aaKnown RBP23.83■■□□□ 1.41
RHBDD3-202ENST00000406335 GABBR1Q9UBS5 961 aa23.83■■□□□ 1.41
RHBDD3-202ENST00000406335 CYP46A1Q9Y6A2 500 aa23.83■■□□□ 1.41
RHBDD3-202ENST00000406335 MYH9P35579 1960 aaKnown RBP23.83■■□□□ 1.41
RHBDD3-202ENST00000406335 FAM86B1E9PN63 330 aa23.82■■□□□ 1.4
RHBDD3-202ENST00000406335 PDGFBP01127 241 aaPredicted RBP23.82■■□□□ 1.4
RHBDD3-202ENST00000406335 FAM86B2P0C5J1 330 aa23.82■■□□□ 1.4
RHBDD3-202ENST00000406335 ATP4AP20648 1035 aa23.82■■□□□ 1.4
RHBDD3-202ENST00000406335 PDIA3P30101 505 aaKnown RBP23.82■■□□□ 1.4
RHBDD3-202ENST00000406335 CLCN3P51790 818 aa23.82■■□□□ 1.4
RHBDD3-202ENST00000406335 EVCP57679 992 aa23.82■■□□□ 1.4
RHBDD3-202ENST00000406335 NTRK3Q16288 839 aa23.82■■□□□ 1.4
RHBDD3-202ENST00000406335 PFKFB3Q16875 520 aaPredicted RBP23.82■■□□□ 1.4
RHBDD3-202ENST00000406335 LRRC55Q6ZSA7 311 aa23.82■■□□□ 1.4
RHBDD3-202ENST00000406335 PHKBQ93100 1093 aa23.82■■□□□ 1.4
RHBDD3-202ENST00000406335 NECTIN4Q96NY8 510 aa23.82■■□□□ 1.4
RHBDD3-202ENST00000406335 PCDHA10Q9Y5I2 948 aa23.82■■□□□ 1.4
RHBDD3-202ENST00000406335 TECTAO75443 2155 aa23.82■■□□□ 1.4
RHBDD3-202ENST00000406335 ZBTB42B2RXF5 422 aa23.81■■□□□ 1.4
RHBDD3-202ENST00000406335 ITIH3Q06033 890 aa23.81■■□□□ 1.4
RHBDD3-202ENST00000406335 DSC3Q14574 896 aa23.81■■□□□ 1.4
RHBDD3-202ENST00000406335 ZNF746Q6NUN9 644 aaPredicted RBP23.81■■□□□ 1.4
RHBDD3-202ENST00000406335 SMAP1Q8IYB5 467 aaPredicted RBP23.81■■□□□ 1.4
RHBDD3-202ENST00000406335 UBALD2Q8IYN6 164 aa23.81■■□□□ 1.4
RHBDD3-202ENST00000406335 ZNF668Q96K58 619 aaPredicted RBP23.81■■□□□ 1.4
RHBDD3-202ENST00000406335 MFSD1Q9H3U5 465 aa23.81■■□□□ 1.4
RHBDD3-202ENST00000406335 NRBP2Q9NSY0 501 aa23.81■■□□□ 1.4
RHBDD3-202ENST00000406335 MAFBQ9Y5Q3 323 aaPredicted RBP23.81■■□□□ 1.4
RHBDD3-202ENST00000406335 ADAMTS3O15072 1205 aa23.8■■□□□ 1.4
RHBDD3-202ENST00000406335 DHX15O43143 795 aaKnown RBP23.8■■□□□ 1.4
RHBDD3-202ENST00000406335 CXCL14O95715 111 aa23.8■■□□□ 1.4
RHBDD3-202ENST00000406335 ALDH7A1P49419 539 aaKnown RBP23.8■■□□□ 1.4
RHBDD3-202ENST00000406335 SETQ01105 290 aaPredicted RBP23.8■■□□□ 1.4
RHBDD3-202ENST00000406335 KCNC3Q14003 757 aa23.8■■□□□ 1.4
RHBDD3-202ENST00000406335 ECHDC2Q86YB7 292 aa23.8■■□□□ 1.4
RHBDD3-202ENST00000406335 LRRC71Q8N4P6 559 aa23.8■■□□□ 1.4
RHBDD3-202ENST00000406335 MRPL43Q8N983 215 aaKnown RBP23.8■■□□□ 1.4
RHBDD3-202ENST00000406335 FAM167AQ96KS9 214 aa23.8■■□□□ 1.4
RHBDD3-202ENST00000406335 ADAM7Q9H2U9 754 aa23.8■■□□□ 1.4
RHBDD3-202ENST00000406335 SORCS3Q9UPU3 1222 aa23.8■■□□□ 1.4
RHBDD3-202ENST00000406335 LOXHD1Q8IVV2 1947 aa23.79■■□□□ 1.4
RHBDD3-202ENST00000406335 PRPF3O43395 683 aaKnown RBP23.79■■□□□ 1.4
RHBDD3-202ENST00000406335 EIF4BP23588 611 aaKnown RBP23.79■■□□□ 1.4
RHBDD3-202ENST00000406335 CLK2P49760 499 aaKnown RBP23.79■■□□□ 1.4
RHBDD3-202ENST00000406335 NUBP1P53384 320 aa23.79■■□□□ 1.4
RHBDD3-202ENST00000406335 C6orf50Q9HD87 102 aa23.79■■□□□ 1.4
RHBDD3-202ENST00000406335 CDH22Q9UJ99 828 aa23.79■■□□□ 1.4
RHBDD3-202ENST00000406335 HCFC2Q9Y5Z7 792 aa23.79■■□□□ 1.4
RHBDD3-202ENST00000406335 C2orf71A6NGG8 1288 aa23.78■■□□□ 1.4
RHBDD3-202ENST00000406335 SPDYE4A6NLX3 237 aa23.78■■□□□ 1.4
RHBDD3-202ENST00000406335 C2CD4DB7Z1M9 353 aa23.78■■□□□ 1.4
RHBDD3-202ENST00000406335 NT5C1B-RDH14C9J2C7 533 aa23.78■■□□□ 1.4
RHBDD3-202ENST00000406335 MTHFRP42898 656 aa23.78■■□□□ 1.4
RHBDD3-202ENST00000406335 PRR16Q569H4 304 aa23.78■■□□□ 1.4
RHBDD3-202ENST00000406335 MCTP2Q6DN12 878 aa23.78■■□□□ 1.4
RHBDD3-202ENST00000406335 ZNF710Q8N1W2 664 aa23.78■■□□□ 1.4
RHBDD3-202ENST00000406335 HELQQ8TDG4 1101 aa23.78■■□□□ 1.4
RHBDD3-202ENST00000406335 NLRP7Q8WX94 980 aa23.78■■□□□ 1.4
RHBDD3-202ENST00000406335 TMEM169Q96HH4 297 aa23.78■■□□□ 1.4
RHBDD3-202ENST00000406335 SLC26A6Q9BXS9 759 aa23.78■■□□□ 1.4
RHBDD3-202ENST00000406335 POMKQ9H5K3 350 aa23.78■■□□□ 1.4
RHBDD3-202ENST00000406335 PDRG1Q9NUG6 133 aa23.78■■□□□ 1.4
RHBDD3-202ENST00000406335 DBR1Q9UK59 544 aaKnown RBP23.78■■□□□ 1.4
RHBDD3-202ENST00000406335 KIAA1671Q9BY89 1806 aa23.77■■□□□ 1.4
RHBDD3-202ENST00000406335 GALR2O43603 387 aaPredicted RBP23.77■■□□□ 1.4
RHBDD3-202ENST00000406335 CYP3A4P08684 503 aa23.77■■□□□ 1.4
RHBDD3-202ENST00000406335 WEE2P0C1S8 567 aa23.77■■□□□ 1.4
RHBDD3-202ENST00000406335 IFNAR1P17181 557 aa23.77■■□□□ 1.4
RHBDD3-202ENST00000406335 ATAT1Q5SQI0 421 aa23.77■■□□□ 1.4
RHBDD3-202ENST00000406335 RARS2Q5T160 578 aaKnown RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms