RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 TMEM161AQ9NX61 479 aa10.67□□□□□ -0.7
NUP43-204ENST00000403890 NCDNQ9UBB6 729 aa10.67□□□□□ -0.7
NUP43-204ENST00000403890 CDV3Q9UKY7 258 aaKnown RBP10.67□□□□□ -0.7
NUP43-204ENST00000403890 SIT1Q9Y3P8 196 aa10.67□□□□□ -0.7
NUP43-204ENST00000403890 ANKRD11Q6UB99 2663 aaPredicted RBP10.67□□□□□ -0.7
NUP43-204ENST00000403890 FNDC1Q4ZHG4 1894 aaPredicted RBP10.66□□□□□ -0.7
NUP43-204ENST00000403890 ZMYM6O95789 1325 aa10.66□□□□□ -0.7
NUP43-204ENST00000403890 FRMPD4Q14CM0 1322 aa10.66□□□□□ -0.7
NUP43-204ENST00000403890 NARSO43776 548 aaKnown RBP10.66□□□□□ -0.7
NUP43-204ENST00000403890 RPS6KA5O75582 802 aa10.66□□□□□ -0.7
NUP43-204ENST00000403890 DCNP07585 359 aaKnown RBP10.66□□□□□ -0.7
NUP43-204ENST00000403890 CFHP08603 1231 aa10.66□□□□□ -0.7
NUP43-204ENST00000403890 CA8P35219 290 aa10.66□□□□□ -0.7
NUP43-204ENST00000403890 PBX3P40426 434 aa10.66□□□□□ -0.7
NUP43-204ENST00000403890 NT5C2P49902 561 aa10.66□□□□□ -0.7
NUP43-204ENST00000403890 LMNB2Q03252 620 aa10.66□□□□□ -0.7
NUP43-204ENST00000403890 KCNC4Q03721 635 aa10.66□□□□□ -0.7
NUP43-204ENST00000403890 NONOQ15233 471 aaKnown RBP eCLIP10.66□□□□□ -0.7
NUP43-204ENST00000403890 MCMDC2Q4G0Z9 681 aa10.66□□□□□ -0.7
NUP43-204ENST00000403890 SPECC1Q5M775 1068 aa10.66□□□□□ -0.7
NUP43-204ENST00000403890 C6orf132Q5T0Z8 1188 aa10.66□□□□□ -0.7
NUP43-204ENST00000403890 TMC5Q6UXY8 1006 aa10.66□□□□□ -0.7
NUP43-204ENST00000403890 LRRC55Q6ZSA7 311 aa10.66□□□□□ -0.7
NUP43-204ENST00000403890 NLRX1Q86UT6 975 aa10.66□□□□□ -0.7
NUP43-204ENST00000403890 CABP7Q86V35 215 aa10.66□□□□□ -0.7
NUP43-204ENST00000403890 ENAHQ8N8S7 591 aaPredicted RBP10.66□□□□□ -0.7
NUP43-204ENST00000403890 SECISBP2LQ93073 1101 aaKnown RBP10.66□□□□□ -0.7
NUP43-204ENST00000403890 ZSCAN10Q96SZ4 725 aaPredicted RBP10.66□□□□□ -0.7
NUP43-204ENST00000403890 RTKNQ9BST9 563 aa10.66□□□□□ -0.7
NUP43-204ENST00000403890 ELAC1Q9H777 363 aaKnown RBP10.66□□□□□ -0.7
NUP43-204ENST00000403890 TBC1D17Q9HA65 648 aa10.66□□□□□ -0.7
NUP43-204ENST00000403890 ST3GAL5Q9UNP4 418 aa10.66□□□□□ -0.7
NUP43-204ENST00000403890 GINS2Q9Y248 185 aa10.66□□□□□ -0.7
NUP43-204ENST00000403890 SMIM35A0A1B0GVV1 85 aa10.65□□□□□ -0.7
NUP43-204ENST00000403890 GPR182O15218 404 aa10.65□□□□□ -0.7
NUP43-204ENST00000403890 HOXA2O43364 376 aa10.65□□□□□ -0.7
NUP43-204ENST00000403890 ATP9AO75110 1047 aa10.65□□□□□ -0.7
NUP43-204ENST00000403890 EPCAMP16422 314 aa10.65□□□□□ -0.7
NUP43-204ENST00000403890 PCNX4Q63HM2 1172 aa10.65□□□□□ -0.7
NUP43-204ENST00000403890 PHLDB3Q6NSJ2 640 aa10.65□□□□□ -0.7
NUP43-204ENST00000403890 GPR149Q86SP6 731 aa10.65□□□□□ -0.7
NUP43-204ENST00000403890 LRRC43Q8N309 656 aa10.65□□□□□ -0.7
NUP43-204ENST00000403890 CASD1Q96PB1 797 aa10.65□□□□□ -0.7
NUP43-204ENST00000403890 DLGAP2Q9P1A6 1054 aa10.65□□□□□ -0.7
NUP43-204ENST00000403890 RALYQ9UKM9 306 aaKnown RBP10.65□□□□□ -0.7
NUP43-204ENST00000403890 CA14Q9ULX7 337 aa10.65□□□□□ -0.7
NUP43-204ENST00000403890 NOC2LQ9Y3T9 749 aaKnown RBP10.65□□□□□ -0.7
NUP43-204ENST00000403890 NEDD4P46934 1319 aa10.64□□□□□ -0.71
NUP43-204ENST00000403890 DOCK5Q9H7D0 1870 aa10.64□□□□□ -0.71
NUP43-204ENST00000403890 FANCMQ8IYD8 2048 aa10.64□□□□□ -0.71
NUP43-204ENST00000403890 KCNA2P16389 499 aa10.64□□□□□ -0.71
NUP43-204ENST00000403890 CAMK2BQ13554 666 aa10.64□□□□□ -0.71
NUP43-204ENST00000403890 HOMER1Q86YM7 354 aa10.64□□□□□ -0.71
NUP43-204ENST00000403890 ABI1Q8IZP0 508 aa10.64□□□□□ -0.71
NUP43-204ENST00000403890 SLC39A11Q8N1S5 342 aa10.64□□□□□ -0.71
NUP43-204ENST00000403890 SLC44A3Q8N4M1 653 aa10.64□□□□□ -0.71
NUP43-204ENST00000403890 SLC22A17Q8WUG5 538 aa10.64□□□□□ -0.71
NUP43-204ENST00000403890 TRAPPC12Q8WVT3 735 aa10.64□□□□□ -0.71
NUP43-204ENST00000403890 CDHR1Q96JP9 859 aa10.64□□□□□ -0.71
NUP43-204ENST00000403890 AZI2Q9H6S1 392 aa10.64□□□□□ -0.71
NUP43-204ENST00000403890 SFXN1Q9H9B4 322 aa10.64□□□□□ -0.71
NUP43-204ENST00000403890 CDHR5Q9HBB8 845 aa10.64□□□□□ -0.71
NUP43-204ENST00000403890 LOXHD1Q8IVV2 1947 aa10.63□□□□□ -0.71
NUP43-204ENST00000403890 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.63□□□□□ -0.71
NUP43-204ENST00000403890 ZNF213O14771 459 aa10.63□□□□□ -0.71
NUP43-204ENST00000403890 SPTLC1O15269 473 aa10.63□□□□□ -0.71
NUP43-204ENST00000403890 ALDH7A1P49419 539 aaKnown RBP10.63□□□□□ -0.71
NUP43-204ENST00000403890 GIT2Q14161 759 aa10.63□□□□□ -0.71
NUP43-204ENST00000403890 PLCB4Q15147 1175 aa10.63□□□□□ -0.71
NUP43-204ENST00000403890 LETM2Q2VYF4 491 aa10.63□□□□□ -0.71
NUP43-204ENST00000403890 ZNF528Q3MIS6 628 aa10.63□□□□□ -0.71
NUP43-204ENST00000403890 MTHFD1LQ6UB35 978 aa10.63□□□□□ -0.71
NUP43-204ENST00000403890 PPFIBP1Q86W92 1011 aa10.63□□□□□ -0.71
NUP43-204ENST00000403890 MAML2Q8IZL2 1156 aaPredicted RBP10.63□□□□□ -0.71
NUP43-204ENST00000403890 VPS52Q8N1B4 723 aa10.63□□□□□ -0.71
NUP43-204ENST00000403890 FEZF2Q8TBJ5 459 aa10.63□□□□□ -0.71
NUP43-204ENST00000403890 OTUD7AQ8TE49 926 aaPredicted RBP10.63□□□□□ -0.71
NUP43-204ENST00000403890 TMEM40Q8WWA1 233 aa10.63□□□□□ -0.71
NUP43-204ENST00000403890 ATRIPQ8WXE1 791 aa10.63□□□□□ -0.71
NUP43-204ENST00000403890 RSAD2Q8WXG1 361 aa10.63□□□□□ -0.71
NUP43-204ENST00000403890 NXPE3Q969Y0 559 aa10.63□□□□□ -0.71
NUP43-204ENST00000403890 EVI5LQ96CN4 794 aa10.63□□□□□ -0.71
NUP43-204ENST00000403890 GPRASP2Q96D09 838 aa10.63□□□□□ -0.71
NUP43-204ENST00000403890 FAM227BQ96M60 508 aa10.63□□□□□ -0.71
NUP43-204ENST00000403890 PIGSQ96S52 555 aa10.63□□□□□ -0.71
NUP43-204ENST00000403890 PCYT2Q99447 389 aa10.63□□□□□ -0.71
NUP43-204ENST00000403890 ZSWIM5Q9P217 1185 aa10.63□□□□□ -0.71
NUP43-204ENST00000403890 TSR3Q9UJK0 312 aaKnown RBP10.63□□□□□ -0.71
NUP43-204ENST00000403890 IRAK3Q9Y616 596 aa10.63□□□□□ -0.71
NUP43-204ENST00000403890 A0A0D9SFI3 127 aa10.62□□□□□ -0.71
NUP43-204ENST00000403890 PNMA6FA0A0J9YX94 578 aa10.62□□□□□ -0.71
NUP43-204ENST00000403890 PALM3A6NDB9 673 aaPredicted RBP10.62□□□□□ -0.71
NUP43-204ENST00000403890 B4E1Z4 1266 aa10.62□□□□□ -0.71
NUP43-204ENST00000403890 CCER2I3L3R5 266 aa10.62□□□□□ -0.71
NUP43-204ENST00000403890 SRFP11831 508 aa10.62□□□□□ -0.71
NUP43-204ENST00000403890 KLRC1P26715 233 aa10.62□□□□□ -0.71
NUP43-204ENST00000403890 DSC3Q14574 896 aa10.62□□□□□ -0.71
NUP43-204ENST00000403890 LAPTM4AQ15012 233 aa10.62□□□□□ -0.71
NUP43-204ENST00000403890 IFIT1BQ5T764 474 aaKnown RBP10.62□□□□□ -0.71
NUP43-204ENST00000403890 C15orf39Q6ZRI6 1047 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms