RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 GIT2Q14161 759 aa20.54■□□□□ 0.88
UFD1-202ENST00000399523 CEP55Q53EZ4 464 aa20.54■□□□□ 0.88
UFD1-202ENST00000399523 TMC5Q6UXY8 1006 aa20.54■□□□□ 0.88
UFD1-202ENST00000399523 GPR149Q86SP6 731 aa20.54■□□□□ 0.88
UFD1-202ENST00000399523 ZNF598Q86UK7 904 aaKnown RBP20.54■□□□□ 0.88
UFD1-202ENST00000399523 CCDC60Q8IWA6 550 aaPredicted RBP20.54■□□□□ 0.88
UFD1-202ENST00000399523 VPS52Q8N1B4 723 aa20.54■□□□□ 0.88
UFD1-202ENST00000399523 FEZF2Q8TBJ5 459 aa20.54■□□□□ 0.88
UFD1-202ENST00000399523 LY9Q9HBG7 655 aa20.54■□□□□ 0.88
UFD1-202ENST00000399523 FANCMQ8IYD8 2048 aa20.54■□□□□ 0.88
UFD1-202ENST00000399523 MYH9P35579 1960 aaKnown RBP20.54■□□□□ 0.88
UFD1-202ENST00000399523 CACNA1IQ9P0X4 2223 aa20.53■□□□□ 0.88
UFD1-202ENST00000399523 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.53■□□□□ 0.88
UFD1-202ENST00000399523 MEIS1O00470 390 aa20.53■□□□□ 0.88
UFD1-202ENST00000399523 CA8P35219 290 aa20.53■□□□□ 0.88
UFD1-202ENST00000399523 METAP2P50579 478 aaKnown RBP eCLIP20.53■□□□□ 0.88
UFD1-202ENST00000399523 POLGP54098 1239 aaPredicted RBP20.53■□□□□ 0.88
UFD1-202ENST00000399523 BCAR1P56945 870 aa20.53■□□□□ 0.88
UFD1-202ENST00000399523 B4GALNT3Q6L9W6 998 aa20.53■□□□□ 0.88
UFD1-202ENST00000399523 PDXDC2PQ6P474 469 aa20.53■□□□□ 0.88
UFD1-202ENST00000399523 CCDC149Q6ZUS6 474 aa20.53■□□□□ 0.88
UFD1-202ENST00000399523 CMTR1Q8N1G2 835 aaKnown RBP20.53■□□□□ 0.88
UFD1-202ENST00000399523 TMEM169Q96HH4 297 aa20.53■□□□□ 0.88
UFD1-202ENST00000399523 ZNF302Q9NR11 478 aa20.53■□□□□ 0.88
UFD1-202ENST00000399523 DLL3Q9NYJ7 618 aa20.53■□□□□ 0.88
UFD1-202ENST00000399523 A0A0U1RQF3 1178 aa20.52■□□□□ 0.88
UFD1-202ENST00000399523 NT5C1B-RDH14C9J2C7 533 aa20.52■□□□□ 0.88
UFD1-202ENST00000399523 CTSAP10619 480 aa20.52■□□□□ 0.88
UFD1-202ENST00000399523 NUCB1Q02818 461 aa20.52■□□□□ 0.88
UFD1-202ENST00000399523 CABP7Q86V35 215 aa20.52■□□□□ 0.88
UFD1-202ENST00000399523 MB21D2Q8IYB1 491 aaPredicted RBP20.52■□□□□ 0.88
UFD1-202ENST00000399523 TMEM87AQ8NBN3 555 aa20.52■□□□□ 0.88
UFD1-202ENST00000399523 AUTS2Q8WXX7 1259 aa20.52■□□□□ 0.88
UFD1-202ENST00000399523 MRPL9Q9BYD2 267 aaKnown RBP20.52■□□□□ 0.88
UFD1-202ENST00000399523 ADAMTS10Q9H324 1103 aa20.52■□□□□ 0.88
UFD1-202ENST00000399523 SFXN1Q9H9B4 322 aa20.52■□□□□ 0.88
UFD1-202ENST00000399523 IGSF9Q9P2J2 1179 aa20.52■□□□□ 0.88
UFD1-202ENST00000399523 WNT16Q9UBV4 365 aa20.52■□□□□ 0.88
UFD1-202ENST00000399523 R4GN57 208 aa20.52■□□□□ 0.88
UFD1-202ENST00000399523 EIF4BP23588 611 aaKnown RBP20.51■□□□□ 0.87
UFD1-202ENST00000399523 PTH1RQ03431 593 aa20.51■□□□□ 0.87
UFD1-202ENST00000399523 SWSAP1Q6NVH7 229 aa20.51■□□□□ 0.87
UFD1-202ENST00000399523 DDX53Q86TM3 631 aaKnown RBP20.51■□□□□ 0.87
UFD1-202ENST00000399523 PPFIBP1Q86W92 1011 aa20.51■□□□□ 0.87
UFD1-202ENST00000399523 TMEM173Q86WV6 379 aaPredicted RBP20.51■□□□□ 0.87
UFD1-202ENST00000399523 TEX2Q8IWB9 1127 aa20.51■□□□□ 0.87
UFD1-202ENST00000399523 ZNF710Q8N1W2 664 aa20.51■□□□□ 0.87
UFD1-202ENST00000399523 METTL13Q8N6R0 699 aa20.51■□□□□ 0.87
UFD1-202ENST00000399523 RNF169Q8NCN4 708 aa20.51■□□□□ 0.87
UFD1-202ENST00000399523 HELQQ8TDG4 1101 aa20.51■□□□□ 0.87
UFD1-202ENST00000399523 BBXQ8WY36 941 aaPredicted RBP20.51■□□□□ 0.87
UFD1-202ENST00000399523 C2orf16Q68DN1 1984 aa20.51■□□□□ 0.87
UFD1-202ENST00000399523 hCG_1642624A0A1W2PR95 340 aa20.5■□□□□ 0.87
UFD1-202ENST00000399523 CARNS1A5YM72 827 aa20.5■□□□□ 0.87
UFD1-202ENST00000399523 KRT37O76014 449 aa20.5■□□□□ 0.87
UFD1-202ENST00000399523 NLRP11P59045 1033 aaKnown RBP20.5■□□□□ 0.87
UFD1-202ENST00000399523 DIEXFQ68CQ4 756 aaKnown RBP20.5■□□□□ 0.87
UFD1-202ENST00000399523 MIS18BP1Q6P0N0 1132 aa20.5■□□□□ 0.87
UFD1-202ENST00000399523 MTA3Q9BTC8 594 aa20.5■□□□□ 0.87
UFD1-202ENST00000399523 MAFBQ9Y5Q3 323 aaPredicted RBP20.5■□□□□ 0.87
UFD1-202ENST00000399523 KRBA1A5PL33 1030 aa20.49■□□□□ 0.87
UFD1-202ENST00000399523 DDX39AO00148 427 aaKnown RBP20.49■□□□□ 0.87
UFD1-202ENST00000399523 DHX15O43143 795 aaKnown RBP20.49■□□□□ 0.87
UFD1-202ENST00000399523 FOSP01100 380 aaPredicted RBP20.49■□□□□ 0.87
UFD1-202ENST00000399523 NIPA1Q7RTP0 329 aa20.49■□□□□ 0.87
UFD1-202ENST00000399523 LINC01465Q8N7H1 131 aa20.49■□□□□ 0.87
UFD1-202ENST00000399523 RSPH1Q8WYR4 309 aa20.49■□□□□ 0.87
UFD1-202ENST00000399523 RUBCNQ92622 972 aa20.49■□□□□ 0.87
UFD1-202ENST00000399523 IGSF21Q96ID5 467 aa20.49■□□□□ 0.87
UFD1-202ENST00000399523 CACNA1GO43497 2377 aa20.49■□□□□ 0.87
UFD1-202ENST00000399523 MAGEB2O15479 319 aa20.48■□□□□ 0.87
UFD1-202ENST00000399523 NARSO43776 548 aaKnown RBP20.48■□□□□ 0.87
UFD1-202ENST00000399523 CLCN3P51790 818 aa20.48■□□□□ 0.87
UFD1-202ENST00000399523 LETM2Q2VYF4 491 aa20.48■□□□□ 0.87
UFD1-202ENST00000399523 C15orf39Q6ZRI6 1047 aa20.48■□□□□ 0.87
UFD1-202ENST00000399523 HEATR3Q7Z4Q2 680 aa20.48■□□□□ 0.87
UFD1-202ENST00000399523 TMTC2Q8N394 836 aa20.48■□□□□ 0.87
UFD1-202ENST00000399523 CEP131Q9UPN4 1083 aa20.48■□□□□ 0.87
UFD1-202ENST00000399523 STK25O00506 426 aa20.47■□□□□ 0.87
UFD1-202ENST00000399523 SREBF1P36956 1147 aa20.47■□□□□ 0.87
UFD1-202ENST00000399523 TBC1D8BQ0IIM8 1120 aa20.47■□□□□ 0.87
UFD1-202ENST00000399523 PTPN14Q15678 1187 aa20.47■□□□□ 0.87
UFD1-202ENST00000399523 ZC3H14Q6PJT7 736 aaKnown RBP20.47■□□□□ 0.87
UFD1-202ENST00000399523 CKAP2LQ8IYA6 745 aa20.47■□□□□ 0.87
UFD1-202ENST00000399523 PGBD1Q96JS3 809 aa20.47■□□□□ 0.87
UFD1-202ENST00000399523 CNTNAP3BQ96NU0 1288 aa20.47■□□□□ 0.87
UFD1-202ENST00000399523 MAP7D2Q96T17 732 aa20.47■□□□□ 0.87
UFD1-202ENST00000399523 ANO3Q9BYT9 981 aa20.47■□□□□ 0.87
UFD1-202ENST00000399523 CNTNAP3Q9BZ76 1288 aa20.47■□□□□ 0.87
UFD1-202ENST00000399523 RIC8AQ9NPQ8 531 aa20.47■□□□□ 0.87
UFD1-202ENST00000399523 DACT1Q9NYF0 836 aa20.47■□□□□ 0.87
UFD1-202ENST00000399523 AKT3Q9Y243 479 aa20.47■□□□□ 0.87
UFD1-202ENST00000399523 DOCK8Q8NF50 2099 aa20.47■□□□□ 0.87
UFD1-202ENST00000399523 N4BP1O75113 896 aaKnown RBP20.46■□□□□ 0.87
UFD1-202ENST00000399523 ZC3H11AO75152 810 aaKnown RBP eCLIP20.46■□□□□ 0.87
UFD1-202ENST00000399523 CFHP08603 1231 aa20.46■□□□□ 0.87
UFD1-202ENST00000399523 CALM1P0DP23 149 aa20.46■□□□□ 0.87
UFD1-202ENST00000399523 CALM2P0DP24 149 aa20.46■□□□□ 0.87
UFD1-202ENST00000399523 CALM3P0DP25 149 aa20.46■□□□□ 0.87
UFD1-202ENST00000399523 DARSP14868 501 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms