RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 A0A1W2PQC6 194 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 AP5Z1O43299 807 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 PPP1R37O75864 691 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 KRT16P08779 473 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 VHLP40337 213 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 ZC3H12BQ5HYM0 836 aaKnown RBP10.25□□□□□ -0.77
SMAD9-203ENST00000399275 ARL6IP4Q66PJ3 421 aaKnown RBP10.25□□□□□ -0.77
SMAD9-203ENST00000399275 THOC7Q6I9Y2 204 aaKnown RBP10.25□□□□□ -0.77
SMAD9-203ENST00000399275 PACS2Q86VP3 889 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 REXO1L1PQ8IX06 675 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 ELOA2Q8IYF1 753 aaPredicted RBP10.25□□□□□ -0.77
SMAD9-203ENST00000399275 AHI1Q8N157 1196 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 TERB1Q8NA31 727 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 DDI1Q8WTU0 396 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 MAML1Q92585 1016 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 LRRC39Q96DD0 335 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 DIS3Q9Y2L1 958 aaKnown RBP10.25□□□□□ -0.77
SMAD9-203ENST00000399275 PCDHB6Q9Y5E3 794 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 TMOD1P28289 359 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 MRPS25P82663 173 aaKnown RBP10.24□□□□□ -0.77
SMAD9-203ENST00000399275 GABPAQ06546 454 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 SCRN3Q0VDG4 424 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 LAMC2Q13753 1193 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 BEGAINQ9BUH8 593 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 NOL6Q9H6R4 1146 aaKnown RBP10.24□□□□□ -0.77
SMAD9-203ENST00000399275 EIF2S1P05198 315 aaKnown RBP10.24□□□□□ -0.77
SMAD9-203ENST00000399275 MYBL1P10243 752 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 NCF2P19878 526 aaPredicted RBP10.24□□□□□ -0.77
SMAD9-203ENST00000399275 ABL2P42684 1182 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 EPHB1P54762 984 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 MAP3K10Q02779 954 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 LRRC31Q6UY01 552 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 NELFCDQ8IXH7 590 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 AGGF1Q8N302 714 aaeCLIP10.24□□□□□ -0.77
SMAD9-203ENST00000399275 C3orf20Q8ND61 904 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 GORASP1Q9BQQ3 440 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 NACA2Q9H009 215 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 PARVAQ9NVD7 372 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 PKD2L2Q9NZM6 624 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 HACD3Q9P035 362 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 PPARGC1AQ9UBK2 798 aaKnown RBP10.24□□□□□ -0.77
SMAD9-203ENST00000399275 SH3GLB1Q9Y371 365 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 EFCAB6Q5THR3 1501 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 GLI2P10070 1586 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 hCG_1642624A0A1W2PR95 340 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 STMND1H3BQB6 276 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 SLC12A2P55011 1212 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 CNGA2Q16280 664 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 CCNI2Q6ZMN8 369 aaPredicted RBP10.24□□□□□ -0.77
SMAD9-203ENST00000399275 GPIHBP1Q8IV16 184 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 CMTR1Q8N1G2 835 aaKnown RBP10.24□□□□□ -0.77
SMAD9-203ENST00000399275 EZH1Q92800 747 aaPredicted RBP10.24□□□□□ -0.77
SMAD9-203ENST00000399275 ARMCX3Q9UH62 379 aaPredicted RBP10.24□□□□□ -0.77
SMAD9-203ENST00000399275 TBX22Q9Y458 520 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 DZIP3Q86Y13 1208 aaKnown RBP10.24□□□□□ -0.77
SMAD9-203ENST00000399275 TC2NQ8N9U0 490 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 KIFC2Q96AC6 838 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 NAF1Q96HR8 494 aaKnown RBP10.24□□□□□ -0.77
SMAD9-203ENST00000399275 DEPDC7Q96QD5 511 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 FMO2Q99518 471 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 DNM3Q9UQ16 869 aa10.24□□□□□ -0.77
SMAD9-203ENST00000399275 PRPF3O43395 683 aaKnown RBP10.23□□□□□ -0.77
SMAD9-203ENST00000399275 SLC26A4O43511 780 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 COBLO75128 1261 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 CASP2P42575 452 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 IRAK1P51617 712 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 ARHGDIAP52565 204 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 TMED2Q15363 201 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 WDR93Q6P2C0 686 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 SHC4Q6S5L8 630 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 REXO1Q8N1G1 1221 aaKnown RBP10.23□□□□□ -0.77
SMAD9-203ENST00000399275 CCT8L2Q96SF2 557 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 IMPG2Q9BZV3 1241 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 ZMYND12Q9H0C1 365 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 VCPKMTQ9H867 229 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 SLC39A2Q9NP94 309 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 ARPP21Q9UBL0 812 aaPredicted RBP10.23□□□□□ -0.77
SMAD9-203ENST00000399275 DAPK2Q9UIK4 370 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 ARHGEF40Q8TER5 1519 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 CYTH3O43739 400 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 OATP04181 439 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 ATF2P15336 505 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 CYP27A1Q02318 531 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 PTPN12Q05209 780 aaKnown RBP10.23□□□□□ -0.77
SMAD9-203ENST00000399275 ZNF354CQ86Y25 554 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 GSPT2Q8IYD1 628 aaKnown RBP10.23□□□□□ -0.77
SMAD9-203ENST00000399275 ENGASEQ8NFI3 743 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 MRPL44Q9H9J2 332 aaKnown RBP10.23□□□□□ -0.77
SMAD9-203ENST00000399275 IQGAP1P46940 1657 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 ATP6V1B1P15313 513 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 MDH1P40925 334 aaKnown RBP10.23□□□□□ -0.77
SMAD9-203ENST00000399275 NR1I3Q14994 352 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 LRIG3Q6UXM1 1119 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 NEK8Q86SG6 692 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 OSBP2Q969R2 916 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 ZNF496Q96IT1 587 aaPredicted RBP10.23□□□□□ -0.77
SMAD9-203ENST00000399275 CCDC134Q9H6E4 229 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 FTCDO95954 541 aa10.23□□□□□ -0.77
SMAD9-203ENST00000399275 ATP1A1P05023 1023 aaKnown RBP10.23□□□□□ -0.77
SMAD9-203ENST00000399275 GSTA1P08263 222 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms