RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 SCP2P22307 547 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 KCNA1Q09470 495 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 SPP2Q13103 211 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 KIAA0753Q2KHM9 967 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 MUM1L1Q5H9M0 696 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 ARHGEF16Q5VV41 709 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 VSIG10LQ86VR7 867 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 NOA1Q8NC60 698 aaKnown RBP19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 CCDC43Q96MW1 224 aaKnown RBP19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 TAAR1Q96RJ0 339 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 PNKPQ96T60 521 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 SIX2Q9NPC8 291 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 ADAMTS1Q9UHI8 967 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 EXOC7Q9UPT5 735 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 SAMM50Q9Y512 469 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 A0A087X0T9 212 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 GRID2IPA4D2P6 1211 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 ZBTB39O15060 712 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 RHOXF2BP0C7M4 288 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 FAM228BP0C875 321 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 PTPRAP18433 802 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 YWHABP31946 246 aaKnown RBP19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 GTF2BQ00403 316 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 ENPEPQ07075 957 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 COG2Q14746 738 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 ZC2HC1CQ53FD0 456 aaPredicted RBP19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 OTUD6AQ7L8S5 288 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 DAW1Q8N136 415 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 RHOXF2Q9BQY4 288 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 MLXIPQ9HAP2 919 aa19.34■□□□□ 0.69
HLA-DQB1-204ENST00000399084 SEC31AO94979 1220 aaKnown RBP19.33■□□□□ 0.68
HLA-DQB1-204ENST00000399084 ZBTB7AO95365 584 aa19.33■□□□□ 0.68
HLA-DQB1-204ENST00000399084 DSG3P32926 999 aa19.33■□□□□ 0.68
HLA-DQB1-204ENST00000399084 NPEPPSP55786 919 aa19.33■□□□□ 0.68
HLA-DQB1-204ENST00000399084 PTK2Q05397 1052 aa19.33■□□□□ 0.68
HLA-DQB1-204ENST00000399084 DMTNQ08495 405 aa19.33■□□□□ 0.68
HLA-DQB1-204ENST00000399084 CFAP221Q4G0U5 840 aa19.33■□□□□ 0.68
HLA-DQB1-204ENST00000399084 NOL9Q5SY16 702 aaKnown RBP19.33■□□□□ 0.68
HLA-DQB1-204ENST00000399084 NBPF12Q5TAG4 269 aaPredicted RBP19.33■□□□□ 0.68
HLA-DQB1-204ENST00000399084 CCDC181Q5TID7 509 aa19.33■□□□□ 0.68
HLA-DQB1-204ENST00000399084 IL31RAQ8NI17 732 aa19.33■□□□□ 0.68
HLA-DQB1-204ENST00000399084 NSUN6Q8TEA1 469 aaKnown RBP19.33■□□□□ 0.68
HLA-DQB1-204ENST00000399084 HOXC10Q9NYD6 342 aa19.33■□□□□ 0.68
HLA-DQB1-204ENST00000399084 USP20Q9Y2K6 914 aa19.33■□□□□ 0.68
HLA-DQB1-204ENST00000399084 EXOC3O60645 756 aa19.32■□□□□ 0.68
HLA-DQB1-204ENST00000399084 LMNB1P20700 586 aa19.32■□□□□ 0.68
HLA-DQB1-204ENST00000399084 SMTNP53814 917 aa19.32■□□□□ 0.68
HLA-DQB1-204ENST00000399084 NAP1L1P55209 391 aaKnown RBP19.32■□□□□ 0.68
HLA-DQB1-204ENST00000399084 BFSP1Q12934 665 aa19.32■□□□□ 0.68
HLA-DQB1-204ENST00000399084 SMC1AQ14683 1233 aaKnown RBP19.32■□□□□ 0.68
HLA-DQB1-204ENST00000399084 SUPT20HL1Q3ZLR7 823 aa19.32■□□□□ 0.68
HLA-DQB1-204ENST00000399084 SAMD7Q7Z3H4 446 aa19.32■□□□□ 0.68
HLA-DQB1-204ENST00000399084 TLR10Q9BXR5 811 aa19.32■□□□□ 0.68
HLA-DQB1-204ENST00000399084 RNF146Q9NTX7 359 aa19.32■□□□□ 0.68
HLA-DQB1-204ENST00000399084 NAGPAQ9UK23 515 aa19.32■□□□□ 0.68
HLA-DQB1-204ENST00000399084 NFASCO94856 1347 aa19.32■□□□□ 0.68
HLA-DQB1-204ENST00000399084 K7ENM7 598 aa19.31■□□□□ 0.68
HLA-DQB1-204ENST00000399084 SRGAP2O75044 1071 aa19.31■□□□□ 0.68
HLA-DQB1-204ENST00000399084 EGFRP00533 1210 aa19.31■□□□□ 0.68
HLA-DQB1-204ENST00000399084 VSNL1P62760 191 aa19.31■□□□□ 0.68
HLA-DQB1-204ENST00000399084 TERF2Q15554 542 aa19.31■□□□□ 0.68
HLA-DQB1-204ENST00000399084 TBC1D10BQ4KMP7 808 aaPredicted RBP19.31■□□□□ 0.68
HLA-DQB1-204ENST00000399084 ALKBH5Q6P6C2 394 aaKnown RBP19.31■□□□□ 0.68
HLA-DQB1-204ENST00000399084 REPS2Q8NFH8 660 aa19.31■□□□□ 0.68
HLA-DQB1-204ENST00000399084 INPP4AQ96PE3 977 aaPredicted RBP19.31■□□□□ 0.68
HLA-DQB1-204ENST00000399084 MOV10L1Q9BXT6 1211 aaKnown RBP19.31■□□□□ 0.68
HLA-DQB1-204ENST00000399084 ABCB6Q9NP58 842 aa19.31■□□□□ 0.68
HLA-DQB1-204ENST00000399084 NENFQ9UMX5 172 aa19.31■□□□□ 0.68
HLA-DQB1-204ENST00000399084 BCS1LQ9Y276 419 aa19.31■□□□□ 0.68
HLA-DQB1-204ENST00000399084 PCDHA10Q9Y5I2 948 aa19.31■□□□□ 0.68
HLA-DQB1-204ENST00000399084 MYH11P35749 1972 aa19.31■□□□□ 0.68
HLA-DQB1-204ENST00000399084 ACTN1P12814 892 aa19.31■□□□□ 0.68
HLA-DQB1-204ENST00000399084 EIF2AK2P19525 551 aaKnown RBP19.31■□□□□ 0.68
HLA-DQB1-204ENST00000399084 SOX5P35711 763 aa19.31■□□□□ 0.68
HLA-DQB1-204ENST00000399084 ZNF571Q7Z3V5 609 aaPredicted RBP19.31■□□□□ 0.68
HLA-DQB1-204ENST00000399084 SPATA4Q8NEY3 305 aa19.31■□□□□ 0.68
HLA-DQB1-204ENST00000399084 RBM46Q8TBY0 533 aaKnown RBP19.31■□□□□ 0.68
HLA-DQB1-204ENST00000399084 KIFAP3Q92845 792 aa19.31■□□□□ 0.68
HLA-DQB1-204ENST00000399084 ATP6V0A1Q93050 837 aa19.31■□□□□ 0.68
HLA-DQB1-204ENST00000399084 NTPCRQ9BSD7 190 aaKnown RBP19.31■□□□□ 0.68
HLA-DQB1-204ENST00000399084 GJA3Q9Y6H8 435 aa19.31■□□□□ 0.68
HLA-DQB1-204ENST00000399084 H0YCG3 227 aa19.3■□□□□ 0.68
HLA-DQB1-204ENST00000399084 DDX39AO00148 427 aaKnown RBP19.3■□□□□ 0.68
HLA-DQB1-204ENST00000399084 SASH3O75995 380 aa19.3■□□□□ 0.68
HLA-DQB1-204ENST00000399084 NR3C2P08235 984 aa19.3■□□□□ 0.68
HLA-DQB1-204ENST00000399084 KLRC1P26715 233 aa19.3■□□□□ 0.68
HLA-DQB1-204ENST00000399084 NCKAP1LP55160 1127 aa19.3■□□□□ 0.68
HLA-DQB1-204ENST00000399084 RTP1P59025 263 aa19.3■□□□□ 0.68
HLA-DQB1-204ENST00000399084 ARID5AQ03989 594 aa19.3■□□□□ 0.68
HLA-DQB1-204ENST00000399084 MEI1Q5TIA1 1274 aa19.3■□□□□ 0.68
HLA-DQB1-204ENST00000399084 HAUS6Q7Z4H7 955 aa19.3■□□□□ 0.68
HLA-DQB1-204ENST00000399084 SYCE1Q8N0S2 351 aa19.3■□□□□ 0.68
HLA-DQB1-204ENST00000399084 SPIRE2Q8WWL2 714 aa19.3■□□□□ 0.68
HLA-DQB1-204ENST00000399084 CAPZA3Q96KX2 299 aa19.3■□□□□ 0.68
HLA-DQB1-204ENST00000399084 WRNIP1Q96S55 665 aa19.3■□□□□ 0.68
HLA-DQB1-204ENST00000399084 TEX13BQ9BXU2 312 aa19.3■□□□□ 0.68
HLA-DQB1-204ENST00000399084 TMOD4Q9NZQ9 345 aa19.3■□□□□ 0.68
HLA-DQB1-204ENST00000399084 APEX2Q9UBZ4 518 aa19.3■□□□□ 0.68
HLA-DQB1-204ENST00000399084 SALL4Q9UJQ4 1053 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms