RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 BEX3Q00994 111 aa15.72■□□□□ 0.11
SKA1-202ENST00000398452 COASYQ13057 564 aa15.72■□□□□ 0.11
SKA1-202ENST00000398452 PPFIA1Q13136 1202 aa15.72■□□□□ 0.11
SKA1-202ENST00000398452 EMC2Q15006 297 aa15.72■□□□□ 0.11
SKA1-202ENST00000398452 CT47A1Q5JQC4 288 aaPredicted RBP15.72■□□□□ 0.11
SKA1-202ENST00000398452 FAM26FQ5R3K3 315 aa15.72■□□□□ 0.11
SKA1-202ENST00000398452 SLC17A8Q8NDX2 589 aa15.72■□□□□ 0.11
SKA1-202ENST00000398452 TCP11Q8WWU5 503 aa15.72■□□□□ 0.11
SKA1-202ENST00000398452 DNAJC19Q96DA6 116 aa15.72■□□□□ 0.11
SKA1-202ENST00000398452 IFT74Q96LB3 600 aa15.72■□□□□ 0.11
SKA1-202ENST00000398452 SH2D3AQ9BRG2 576 aa15.72■□□□□ 0.11
SKA1-202ENST00000398452 MTG1Q9BT17 334 aaPredicted RBP15.72■□□□□ 0.11
SKA1-202ENST00000398452 UPF3AQ9H1J1 476 aaKnown RBP15.72■□□□□ 0.11
SKA1-202ENST00000398452 COL1A2P08123 1366 aa15.72■□□□□ 0.11
SKA1-202ENST00000398452 TMEM150BA6NC51 233 aa15.71■□□□□ 0.11
SKA1-202ENST00000398452 GOLGA6L3A6NEY3 463 aa15.71■□□□□ 0.11
SKA1-202ENST00000398452 H0YGN5 161 aa15.71■□□□□ 0.11
SKA1-202ENST00000398452 GOLGA6L19H0YKK7 550 aa15.71■□□□□ 0.11
SKA1-202ENST00000398452 PSMA7O14818 248 aa15.71■□□□□ 0.11
SKA1-202ENST00000398452 MAGEB2O15479 319 aa15.71■□□□□ 0.11
SKA1-202ENST00000398452 PGK1P00558 417 aa15.71■□□□□ 0.11
SKA1-202ENST00000398452 TFRCP02786 760 aaKnown RBP15.71■□□□□ 0.11
SKA1-202ENST00000398452 ATP4AP20648 1035 aa15.71■□□□□ 0.11
SKA1-202ENST00000398452 TMOD1P28289 359 aa15.71■□□□□ 0.11
SKA1-202ENST00000398452 GJA8P48165 433 aa15.71■□□□□ 0.11
SKA1-202ENST00000398452 PSEN2P49810 448 aa15.71■□□□□ 0.11
SKA1-202ENST00000398452 ZNF165P49910 485 aa15.71■□□□□ 0.11
SKA1-202ENST00000398452 IGBP1P78318 339 aa15.71■□□□□ 0.11
SKA1-202ENST00000398452 DMP1Q13316 513 aaPredicted RBP15.71■□□□□ 0.11
SKA1-202ENST00000398452 PDAP1Q13442 181 aaKnown RBP15.71■□□□□ 0.11
SKA1-202ENST00000398452 MFSD10Q14728 455 aa15.71■□□□□ 0.11
SKA1-202ENST00000398452 PPP2R5AQ15172 486 aa15.71■□□□□ 0.11
SKA1-202ENST00000398452 TPD52L1Q16890 204 aaPredicted RBP15.71■□□□□ 0.11
SKA1-202ENST00000398452 ARSHQ5FYA8 562 aa15.71■□□□□ 0.11
SKA1-202ENST00000398452 HABP4Q5JVS0 413 aaKnown RBP15.71■□□□□ 0.11
SKA1-202ENST00000398452 ODR4Q5SWX8 454 aa15.71■□□□□ 0.11
SKA1-202ENST00000398452 ARRDC4Q8NCT1 418 aa15.71■□□□□ 0.11
SKA1-202ENST00000398452 U2AF1L4Q8WU68 220 aaKnown RBP15.71■□□□□ 0.11
SKA1-202ENST00000398452 DEFB118Q96PH6 123 aa15.71■□□□□ 0.11
SKA1-202ENST00000398452 C16orf70Q9BSU1 422 aa15.71■□□□□ 0.11
SKA1-202ENST00000398452 DNAJC25Q9H1X3 360 aa15.71■□□□□ 0.11
SKA1-202ENST00000398452 MRPL44Q9H9J2 332 aaKnown RBP15.71■□□□□ 0.11
SKA1-202ENST00000398452 C17orf75Q9HAS0 396 aa15.71■□□□□ 0.11
SKA1-202ENST00000398452 MYH9P35579 1960 aaKnown RBP15.71■□□□□ 0.1
SKA1-202ENST00000398452 SMTNL1A8MU46 457 aa15.7■□□□□ 0.1
SKA1-202ENST00000398452 H0YCG3 227 aa15.7■□□□□ 0.1
SKA1-202ENST00000398452 KLRC4O43908 158 aa15.7■□□□□ 0.1
SKA1-202ENST00000398452 STBD1O95210 358 aa15.7■□□□□ 0.1
SKA1-202ENST00000398452 GNAT1P11488 350 aa15.7■□□□□ 0.1
SKA1-202ENST00000398452 INSRRP14616 1297 aa15.7■□□□□ 0.1
SKA1-202ENST00000398452 ABCD1P33897 745 aa15.7■□□□□ 0.1
SKA1-202ENST00000398452 KIAA0753Q2KHM9 967 aa15.7■□□□□ 0.1
SKA1-202ENST00000398452 FAM178BQ8IXR5 827 aa15.7■□□□□ 0.1
SKA1-202ENST00000398452 C7orf31Q8N865 590 aa15.7■□□□□ 0.1
SKA1-202ENST00000398452 FAM200AQ8TCP9 573 aa15.7■□□□□ 0.1
SKA1-202ENST00000398452 VTI1AQ96AJ9 217 aa15.7■□□□□ 0.1
SKA1-202ENST00000398452 FUCA2Q9BTY2 467 aa15.7■□□□□ 0.1
SKA1-202ENST00000398452 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.7■□□□□ 0.1
SKA1-202ENST00000398452 SLC39A2Q9NP94 309 aa15.7■□□□□ 0.1
SKA1-202ENST00000398452 BICDL2A1A5D9 508 aa15.69■□□□□ 0.1
SKA1-202ENST00000398452 KBTBD13C9JR72 458 aa15.69■□□□□ 0.1
SKA1-202ENST00000398452 MAFO75444 373 aaPredicted RBP15.69■□□□□ 0.1
SKA1-202ENST00000398452 CABYRO75952 493 aa15.69■□□□□ 0.1
SKA1-202ENST00000398452 GCNT3O95395 438 aa15.69■□□□□ 0.1
SKA1-202ENST00000398452 SGPL1O95470 568 aa15.69■□□□□ 0.1
SKA1-202ENST00000398452 F2P00734 622 aa15.69■□□□□ 0.1
SKA1-202ENST00000398452 PLS3P13797 630 aa15.69■□□□□ 0.1
SKA1-202ENST00000398452 ALCAMQ13740 583 aa15.69■□□□□ 0.1
SKA1-202ENST00000398452 GRIK4Q16099 956 aa15.69■□□□□ 0.1
SKA1-202ENST00000398452 DPCR1Q3MIW9 517 aa15.69■□□□□ 0.1
SKA1-202ENST00000398452 KLHL10Q6JEL2 608 aa15.69■□□□□ 0.1
SKA1-202ENST00000398452 SFR1Q86XK3 245 aa15.69■□□□□ 0.1
SKA1-202ENST00000398452 MYOCDQ8IZQ8 938 aa15.69■□□□□ 0.1
SKA1-202ENST00000398452 METTL13Q8N6R0 699 aa15.69■□□□□ 0.1
SKA1-202ENST00000398452 MAP7D2Q96T17 732 aa15.69■□□□□ 0.1
SKA1-202ENST00000398452 TSG101Q99816 390 aa15.69■□□□□ 0.1
SKA1-202ENST00000398452 POLR3FQ9H1D9 316 aaPredicted RBP15.69■□□□□ 0.1
SKA1-202ENST00000398452 RNPEPQ9H4A4 650 aa15.69■□□□□ 0.1
SKA1-202ENST00000398452 DHX33Q9H6R0 707 aaKnown RBP15.69■□□□□ 0.1
SKA1-202ENST00000398452 SUGCTQ9HAC7 445 aa15.69■□□□□ 0.1
SKA1-202ENST00000398452 TBC1D7Q9P0N9 293 aa15.69■□□□□ 0.1
SKA1-202ENST00000398452 NRCAMQ92823 1304 aa15.68■□□□□ 0.1
SKA1-202ENST00000398452 FRMD3A2A2Y4 597 aa15.68■□□□□ 0.1
SKA1-202ENST00000398452 CCDC169A6NNP5 214 aa15.68■□□□□ 0.1
SKA1-202ENST00000398452 SFI1A8K8P3 1242 aa15.68■□□□□ 0.1
SKA1-202ENST00000398452 RSPH10B2B2RC85 870 aa15.68■□□□□ 0.1
SKA1-202ENST00000398452 K7ENM7 598 aa15.68■□□□□ 0.1
SKA1-202ENST00000398452 ADAMTS4O75173 837 aa15.68■□□□□ 0.1
SKA1-202ENST00000398452 RSPH10BP0C881 870 aa15.68■□□□□ 0.1
SKA1-202ENST00000398452 CST5P28325 142 aaPredicted RBP15.68■□□□□ 0.1
SKA1-202ENST00000398452 NKX3-2P78367 333 aa15.68■□□□□ 0.1
SKA1-202ENST00000398452 PURAQ00577 322 aaKnown RBP15.68■□□□□ 0.1
SKA1-202ENST00000398452 TARBP2Q15633 366 aaKnown RBP15.68■□□□□ 0.1
SKA1-202ENST00000398452 IER5Q5VY09 327 aa15.68■□□□□ 0.1
SKA1-202ENST00000398452 PSPC1Q8WXF1 523 aaKnown RBP15.68■□□□□ 0.1
SKA1-202ENST00000398452 OLFML3Q9NRN5 406 aa15.68■□□□□ 0.1
SKA1-202ENST00000398452 GDAQ9Y2T3 454 aa15.68■□□□□ 0.1
SKA1-202ENST00000398452 TRIOBPQ9H2D6 2365 aa15.68■□□□□ 0.1
SKA1-202ENST00000398452 C17orf102A2RUQ5 167 aa15.67■□□□□ 0.1
SKA1-202ENST00000398452 MOXD2PA6NHM9 499 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms