RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 SLC29A2Q14542 456 aa18.78■□□□□ 0.6
EWSR1-206ENST00000397938 C6orf118Q5T5N4 469 aa18.78■□□□□ 0.6
EWSR1-206ENST00000397938 ADAT2Q7Z6V5 191 aaKnown RBP18.78■□□□□ 0.6
EWSR1-206ENST00000397938 CROCCP2Q86T23 111 aa18.78■□□□□ 0.6
EWSR1-206ENST00000397938 TBC1D1Q86TI0 1168 aaPredicted RBP18.78■□□□□ 0.6
EWSR1-206ENST00000397938 LRRC47Q8N1G4 583 aaKnown RBP18.78■□□□□ 0.6
EWSR1-206ENST00000397938 CNOT7Q9UIV1 285 aaKnown RBP18.78■□□□□ 0.6
EWSR1-206ENST00000397938 POTEFA5A3E0 1075 aa18.78■□□□□ 0.6
EWSR1-206ENST00000397938 SMIM23A6NLE4 172 aa18.78■□□□□ 0.6
EWSR1-206ENST00000397938 POTEIP0CG38 1075 aa18.78■□□□□ 0.6
EWSR1-206ENST00000397938 LMNB1P20700 586 aa18.78■□□□□ 0.6
EWSR1-206ENST00000397938 PAX7P23759 505 aa18.78■□□□□ 0.6
EWSR1-206ENST00000397938 GIT2Q14161 759 aa18.78■□□□□ 0.6
EWSR1-206ENST00000397938 FAM133BQ5BKY9 247 aaKnown RBP18.78■□□□□ 0.6
EWSR1-206ENST00000397938 POTEGQ6S5H5 508 aa18.78■□□□□ 0.6
EWSR1-206ENST00000397938 POTEEQ6S8J3 1075 aa18.78■□□□□ 0.6
EWSR1-206ENST00000397938 PNMA8AQ86V59 439 aaPredicted RBP18.78■□□□□ 0.6
EWSR1-206ENST00000397938 SFR1Q86XK3 245 aa18.78■□□□□ 0.6
EWSR1-206ENST00000397938 UIMC1Q96RL1 719 aa18.78■□□□□ 0.6
EWSR1-206ENST00000397938 JMJD4Q9H9V9 463 aa18.78■□□□□ 0.6
EWSR1-206ENST00000397938 KCNMB3Q9NPA1 279 aa18.78■□□□□ 0.6
EWSR1-206ENST00000397938 GPCPD1Q9NPB8 672 aa18.78■□□□□ 0.6
EWSR1-206ENST00000397938 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.78■□□□□ 0.6
EWSR1-206ENST00000397938 GRHL1Q9NZI5 618 aa18.78■□□□□ 0.6
EWSR1-206ENST00000397938 RASAL2Q9UJF2 1139 aa18.78■□□□□ 0.6
EWSR1-206ENST00000397938 PLIN4Q96Q06 1357 aa18.77■□□□□ 0.6
EWSR1-206ENST00000397938 NR3C1P04150 777 aa18.77■□□□□ 0.6
EWSR1-206ENST00000397938 VIMP08670 466 aaKnown RBP18.77■□□□□ 0.6
EWSR1-206ENST00000397938 ZNF268Q14587 947 aaPredicted RBP18.77■□□□□ 0.6
EWSR1-206ENST00000397938 NAA25Q14CX7 972 aa18.77■□□□□ 0.6
EWSR1-206ENST00000397938 GLYCTKQ8IVS8 523 aa18.77■□□□□ 0.6
EWSR1-206ENST00000397938 CTNNBL1Q8WYA6 563 aaPredicted RBP18.77■□□□□ 0.6
EWSR1-206ENST00000397938 NAP1L4Q99733 375 aaKnown RBP18.77■□□□□ 0.6
EWSR1-206ENST00000397938 TMEM109Q9BVC6 243 aa18.77■□□□□ 0.6
EWSR1-206ENST00000397938 ABCF3Q9NUQ8 709 aa18.77■□□□□ 0.6
EWSR1-206ENST00000397938 AGAP1Q9UPQ3 857 aa18.77■□□□□ 0.6
EWSR1-206ENST00000397938 ASTN1O14525 1302 aa18.77■□□□□ 0.6
EWSR1-206ENST00000397938 RFC4P35249 363 aa18.77■□□□□ 0.6
EWSR1-206ENST00000397938 CASP4P49662 377 aa18.77■□□□□ 0.6
EWSR1-206ENST00000397938 MYO1EQ12965 1108 aa18.77■□□□□ 0.6
EWSR1-206ENST00000397938 CLUL1Q15846 466 aa18.77■□□□□ 0.6
EWSR1-206ENST00000397938 NSMCE1Q8WV22 266 aa18.77■□□□□ 0.6
EWSR1-206ENST00000397938 TYW1Q9NV66 732 aaKnown RBP18.77■□□□□ 0.6
EWSR1-206ENST00000397938 ECM2O94769 699 aaPredicted RBP18.77■□□□□ 0.59
EWSR1-206ENST00000397938 SOX5P35711 763 aa18.77■□□□□ 0.59
EWSR1-206ENST00000397938 ZNF211Q13398 564 aaPredicted RBP18.77■□□□□ 0.59
EWSR1-206ENST00000397938 TNFAIP8L3Q5GJ75 292 aa18.77■□□□□ 0.59
EWSR1-206ENST00000397938 BTNL9Q6UXG8 535 aa18.77■□□□□ 0.59
EWSR1-206ENST00000397938 EP400NLQ6ZTU2 488 aa18.77■□□□□ 0.59
EWSR1-206ENST00000397938 ADGRF4Q8IZF3 695 aa18.77■□□□□ 0.59
EWSR1-206ENST00000397938 MTMR4Q9NYA4 1195 aa18.77■□□□□ 0.59
EWSR1-206ENST00000397938 C15orf41Q9Y2V0 281 aa18.77■□□□□ 0.59
EWSR1-206ENST00000397938 OAS1P00973 400 aaKnown RBP18.76■□□□□ 0.59
EWSR1-206ENST00000397938 ALADP13716 330 aa18.76■□□□□ 0.59
EWSR1-206ENST00000397938 ABCB4P21439 1286 aa18.76■□□□□ 0.59
EWSR1-206ENST00000397938 STAT3P40763 770 aa18.76■□□□□ 0.59
EWSR1-206ENST00000397938 PTGIRP43119 386 aa18.76■□□□□ 0.59
EWSR1-206ENST00000397938 BMT2Q1RMZ1 405 aa18.76■□□□□ 0.59
EWSR1-206ENST00000397938 UBAP2Q5T6F2 1119 aaKnown RBP18.76■□□□□ 0.59
EWSR1-206ENST00000397938 FMNL3Q8IVF7 1028 aa18.76■□□□□ 0.59
EWSR1-206ENST00000397938 REEP2Q9BRK0 252 aa18.76■□□□□ 0.59
EWSR1-206ENST00000397938 SYT11Q9BT88 431 aa18.76■□□□□ 0.59
EWSR1-206ENST00000397938 NYXQ9GZU5 481 aa18.76■□□□□ 0.59
EWSR1-206ENST00000397938 SEMA4AQ9H3S1 761 aa18.76■□□□□ 0.59
EWSR1-206ENST00000397938 ATF5Q9Y2D1 282 aaPredicted RBP18.76■□□□□ 0.59
EWSR1-206ENST00000397938 GPR75-ASB3A0A0A6YYF3 556 aa18.76■□□□□ 0.59
EWSR1-206ENST00000397938 SNX3O60493 162 aa18.76■□□□□ 0.59
EWSR1-206ENST00000397938 PHF2O75151 1096 aa18.76■□□□□ 0.59
EWSR1-206ENST00000397938 VCAM1P19320 739 aa18.76■□□□□ 0.59
EWSR1-206ENST00000397938 RPL13P26373 211 aaKnown RBP18.76■□□□□ 0.59
EWSR1-206ENST00000397938 KIRREL3Q8IZU9 778 aa18.76■□□□□ 0.59
EWSR1-206ENST00000397938 EPS8L3Q8TE67 593 aaKnown RBP18.76■□□□□ 0.59
EWSR1-206ENST00000397938 ALG3Q92685 438 aa18.76■□□□□ 0.59
EWSR1-206ENST00000397938 L3MBTL3Q96JM7 780 aaPredicted RBP18.76■□□□□ 0.59
EWSR1-206ENST00000397938 TRIM6Q9C030 488 aaPredicted RBP18.76■□□□□ 0.59
EWSR1-206ENST00000397938 STMN4Q9H169 189 aaPredicted RBP18.76■□□□□ 0.59
EWSR1-206ENST00000397938 UBOX5O94941 541 aa18.75■□□□□ 0.59
EWSR1-206ENST00000397938 NQO1P15559 274 aaKnown RBP18.75■□□□□ 0.59
EWSR1-206ENST00000397938 GBP1P32455 592 aa18.75■□□□□ 0.59
EWSR1-206ENST00000397938 IFNAR2P48551 515 aa18.75■□□□□ 0.59
EWSR1-206ENST00000397938 NCALDP61601 193 aa18.75■□□□□ 0.59
EWSR1-206ENST00000397938 CNGA2Q16280 664 aa18.75■□□□□ 0.59
EWSR1-206ENST00000397938 ARHGEF26Q96DR7 871 aa18.75■□□□□ 0.59
EWSR1-206ENST00000397938 ANP32DO95626 131 aa18.75■□□□□ 0.59
EWSR1-206ENST00000397938 RARAP10276 462 aa18.75■□□□□ 0.59
EWSR1-206ENST00000397938 KRT13P13646 458 aa18.75■□□□□ 0.59
EWSR1-206ENST00000397938 ZNF543Q08ER8 600 aa18.75■□□□□ 0.59
EWSR1-206ENST00000397938 AGAP11Q8TF27 550 aa18.75■□□□□ 0.59
EWSR1-206ENST00000397938 C18orf8Q96DM3 657 aa18.75■□□□□ 0.59
EWSR1-206ENST00000397938 PSTPIP2Q9H939 334 aa18.75■□□□□ 0.59
EWSR1-206ENST00000397938 L3MBTL1Q9Y468 752 aa18.75■□□□□ 0.59
EWSR1-206ENST00000397938 COL24A1Q17RW2 1714 aa18.74■□□□□ 0.59
EWSR1-206ENST00000397938 NEBLO76041 1014 aa18.74■□□□□ 0.59
EWSR1-206ENST00000397938 RPL21P46778 160 aaKnown RBP18.74■□□□□ 0.59
EWSR1-206ENST00000397938 PDE6CP51160 858 aa18.74■□□□□ 0.59
EWSR1-206ENST00000397938 SYT2Q8N9I0 419 aaPredicted RBP18.74■□□□□ 0.59
EWSR1-206ENST00000397938 TBC1D22AQ8WUA7 517 aa18.74■□□□□ 0.59
EWSR1-206ENST00000397938 BATF3Q9NR55 127 aa18.74■□□□□ 0.59
EWSR1-206ENST00000397938 MTRF1LQ9UGC7 380 aaKnown RBP18.74■□□□□ 0.59
EWSR1-206ENST00000397938 PARP2Q9UGN5 583 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms