RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 TDP2O95551 362 aa16.09■□□□□ 0.17
SNRNP25-203ENST00000397876 EIF4BP23588 611 aaKnown RBP16.09■□□□□ 0.17
SNRNP25-203ENST00000397876 GPC3P51654 580 aa16.09■□□□□ 0.17
SNRNP25-203ENST00000397876 FAM189BP81408 668 aa16.09■□□□□ 0.17
SNRNP25-203ENST00000397876 STK3Q13188 491 aa16.09■□□□□ 0.17
SNRNP25-203ENST00000397876 GALNT17Q6IS24 598 aa16.09■□□□□ 0.17
SNRNP25-203ENST00000397876 RBM23Q86U06 439 aaKnown RBP16.09■□□□□ 0.17
SNRNP25-203ENST00000397876 ABI1Q8IZP0 508 aa16.09■□□□□ 0.17
SNRNP25-203ENST00000397876 DAGLBQ8NCG7 672 aa16.09■□□□□ 0.17
SNRNP25-203ENST00000397876 MICAL1Q8TDZ2 1067 aa16.09■□□□□ 0.17
SNRNP25-203ENST00000397876 NLRP7Q8WX94 980 aa16.09■□□□□ 0.17
SNRNP25-203ENST00000397876 GJA10Q969M2 543 aa16.09■□□□□ 0.17
SNRNP25-203ENST00000397876 TMEM117Q9H0C3 514 aa16.09■□□□□ 0.17
SNRNP25-203ENST00000397876 TYW1Q9NV66 732 aaKnown RBP16.09■□□□□ 0.17
SNRNP25-203ENST00000397876 HCSTQ9UBK5 93 aa16.09■□□□□ 0.17
SNRNP25-203ENST00000397876 SEPT9Q9UHD8 586 aaPredicted RBP16.09■□□□□ 0.17
SNRNP25-203ENST00000397876 CYP3A7-CYP3A51PA0A087WV96 503 aa16.08■□□□□ 0.16
SNRNP25-203ENST00000397876 DARSP14868 501 aaKnown RBP16.08■□□□□ 0.16
SNRNP25-203ENST00000397876 CYP3A7P24462 503 aa16.08■□□□□ 0.16
SNRNP25-203ENST00000397876 NONOQ15233 471 aaKnown RBP eCLIP16.08■□□□□ 0.16
SNRNP25-203ENST00000397876 XKR3Q5GH77 459 aa16.08■□□□□ 0.16
SNRNP25-203ENST00000397876 PDE12Q6L8Q7 609 aaKnown RBP16.08■□□□□ 0.16
SNRNP25-203ENST00000397876 MOXD1Q6UVY6 613 aa16.08■□□□□ 0.16
SNRNP25-203ENST00000397876 LRRC43Q8N309 656 aa16.08■□□□□ 0.16
SNRNP25-203ENST00000397876 ZNF668Q96K58 619 aaPredicted RBP16.08■□□□□ 0.16
SNRNP25-203ENST00000397876 MSLNLQ96KJ4 702 aa16.08■□□□□ 0.16
SNRNP25-203ENST00000397876 TLE6Q9H808 572 aa16.08■□□□□ 0.16
SNRNP25-203ENST00000397876 PDRG1Q9NUG6 133 aa16.08■□□□□ 0.16
SNRNP25-203ENST00000397876 PCDHGC5Q9Y5F6 944 aa16.08■□□□□ 0.16
SNRNP25-203ENST00000397876 M0R2N6 131 aa16.07■□□□□ 0.16
SNRNP25-203ENST00000397876 CDKL5O76039 1030 aa16.07■□□□□ 0.16
SNRNP25-203ENST00000397876 EYA4O95677 639 aa16.07■□□□□ 0.16
SNRNP25-203ENST00000397876 COASYQ13057 564 aa16.07■□□□□ 0.16
SNRNP25-203ENST00000397876 TARBP2Q15633 366 aaKnown RBP16.07■□□□□ 0.16
SNRNP25-203ENST00000397876 MTERF2Q49AM1 385 aa16.07■□□□□ 0.16
SNRNP25-203ENST00000397876 KRT25Q7Z3Z0 450 aa16.07■□□□□ 0.16
SNRNP25-203ENST00000397876 ECHDC2Q86YB7 292 aa16.07■□□□□ 0.16
SNRNP25-203ENST00000397876 RNF169Q8NCN4 708 aa16.07■□□□□ 0.16
SNRNP25-203ENST00000397876 SMRP1Q8NCR6 262 aa16.07■□□□□ 0.16
SNRNP25-203ENST00000397876 CDCA3Q99618 268 aaPredicted RBP16.07■□□□□ 0.16
SNRNP25-203ENST00000397876 LARP6Q9BRS8 491 aaKnown RBP16.07■□□□□ 0.16
SNRNP25-203ENST00000397876 CWH43Q9H720 699 aa16.07■□□□□ 0.16
SNRNP25-203ENST00000397876 CLEC1BQ9P126 229 aa16.07■□□□□ 0.16
SNRNP25-203ENST00000397876 BARX2Q9UMQ3 279 aaPredicted RBP16.07■□□□□ 0.16
SNRNP25-203ENST00000397876 LZTS1Q9Y250 596 aa16.07■□□□□ 0.16
SNRNP25-203ENST00000397876 GLP2RO95838 553 aa16.06■□□□□ 0.16
SNRNP25-203ENST00000397876 SRGAP2BP0DMP2 458 aa16.06■□□□□ 0.16
SNRNP25-203ENST00000397876 PPM1AP35813 382 aa16.06■□□□□ 0.16
SNRNP25-203ENST00000397876 DNM2P50570 870 aa16.06■□□□□ 0.16
SNRNP25-203ENST00000397876 CDC42EP1Q00587 391 aa16.06■□□□□ 0.16
SNRNP25-203ENST00000397876 NPY5RQ15761 445 aa16.06■□□□□ 0.16
SNRNP25-203ENST00000397876 B3GNT9Q6UX72 402 aa16.06■□□□□ 0.16
SNRNP25-203ENST00000397876 ETNPPLQ8TBG4 499 aa16.06■□□□□ 0.16
SNRNP25-203ENST00000397876 MBOAT7Q96N66 472 aa16.06■□□□□ 0.16
SNRNP25-203ENST00000397876 ZNF558Q96NG5 402 aa16.06■□□□□ 0.16
SNRNP25-203ENST00000397876 AIFM3Q96NN9 605 aa16.06■□□□□ 0.16
SNRNP25-203ENST00000397876 CASD1Q96PB1 797 aa16.06■□□□□ 0.16
SNRNP25-203ENST00000397876 NIFKQ9BYG3 293 aaKnown RBP16.06■□□□□ 0.16
SNRNP25-203ENST00000397876 GCOM2Q9BZD3 368 aaPredicted RBP16.06■□□□□ 0.16
SNRNP25-203ENST00000397876 DACT1Q9NYF0 836 aa16.06■□□□□ 0.16
SNRNP25-203ENST00000397876 DDX25Q9UHL0 483 aaKnown RBP16.06■□□□□ 0.16
SNRNP25-203ENST00000397876 PUF60Q9UHX1 559 aaKnown RBP16.06■□□□□ 0.16
SNRNP25-203ENST00000397876 CCDC194A0A1B0GVG4 234 aa16.05■□□□□ 0.16
SNRNP25-203ENST00000397876 XBP1P17861 261 aa16.05■□□□□ 0.16
SNRNP25-203ENST00000397876 FGFR4P22455 802 aa16.05■□□□□ 0.16
SNRNP25-203ENST00000397876 ERVFC1P60507 584 aa16.05■□□□□ 0.16
SNRNP25-203ENST00000397876 PLCB3Q01970 1234 aa16.05■□□□□ 0.16
SNRNP25-203ENST00000397876 DUSP6Q16828 381 aa16.05■□□□□ 0.16
SNRNP25-203ENST00000397876 INF2Q27J81 1249 aa16.05■□□□□ 0.16
SNRNP25-203ENST00000397876 KCNT2Q6UVM3 1135 aa16.05■□□□□ 0.16
SNRNP25-203ENST00000397876 MRPS27Q92552 414 aaKnown RBP16.05■□□□□ 0.16
SNRNP25-203ENST00000397876 ENTPD7Q9NQZ7 604 aa16.05■□□□□ 0.16
SNRNP25-203ENST00000397876 RNF19AQ9NV58 838 aa16.05■□□□□ 0.16
SNRNP25-203ENST00000397876 STK36Q9NRP7 1315 aa16.04■□□□□ 0.16
SNRNP25-203ENST00000397876 A0A0U1RQF3 1178 aa16.04■□□□□ 0.16
SNRNP25-203ENST00000397876 TMEM150BA6NC51 233 aa16.04■□□□□ 0.16
SNRNP25-203ENST00000397876 FSCN2O14926 492 aa16.04■□□□□ 0.16
SNRNP25-203ENST00000397876 PER2O15055 1255 aa16.04■□□□□ 0.16
SNRNP25-203ENST00000397876 EOMESO95936 686 aa16.04■□□□□ 0.16
SNRNP25-203ENST00000397876 NEFLP07196 543 aa16.04■□□□□ 0.16
SNRNP25-203ENST00000397876 SFPQP23246 707 aaKnown RBP eCLIP16.04■□□□□ 0.16
SNRNP25-203ENST00000397876 PSMC5P62195 406 aa16.04■□□□□ 0.16
SNRNP25-203ENST00000397876 KRT17Q04695 432 aa16.04■□□□□ 0.16
SNRNP25-203ENST00000397876 DRP2Q13474 957 aa16.04■□□□□ 0.16
SNRNP25-203ENST00000397876 LETM2Q2VYF4 491 aa16.04■□□□□ 0.16
SNRNP25-203ENST00000397876 PLPP4Q5VZY2 271 aa16.04■□□□□ 0.16
SNRNP25-203ENST00000397876 LRRC55Q6ZSA7 311 aa16.04■□□□□ 0.16
SNRNP25-203ENST00000397876 TCF25Q9BQ70 676 aa16.04■□□□□ 0.16
SNRNP25-203ENST00000397876 JPH2Q9BR39 696 aaPredicted RBP16.04■□□□□ 0.16
SNRNP25-203ENST00000397876 MRPL9Q9BYD2 267 aaKnown RBP16.04■□□□□ 0.16
SNRNP25-203ENST00000397876 SLKQ9H2G2 1235 aaPredicted RBP16.04■□□□□ 0.16
SNRNP25-203ENST00000397876 KCNJ14Q9UNX9 436 aa16.04■□□□□ 0.16
SNRNP25-203ENST00000397876 USP15Q9Y4E8 981 aaPredicted RBP16.04■□□□□ 0.16
SNRNP25-203ENST00000397876 IGKV6-21A0A0C4DH24 114 aa16.03■□□□□ 0.16
SNRNP25-203ENST00000397876 DDX11L8A8MPP1 907 aa16.03■□□□□ 0.16
SNRNP25-203ENST00000397876 SLC37A4O43826 429 aa16.03■□□□□ 0.16
SNRNP25-203ENST00000397876 DKC1O60832 514 aaKnown RBP eCLIP16.03■□□□□ 0.16
SNRNP25-203ENST00000397876 STBD1O95210 358 aa16.03■□□□□ 0.16
SNRNP25-203ENST00000397876 GCFC2P16383 781 aaKnown RBP16.03■□□□□ 0.16
SNRNP25-203ENST00000397876 SCRN1Q12765 414 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms