RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 STXBP4Q6ZWJ1 553 aa21.5■■□□□ 1.03
PDLIM2-205ENST00000397761 MAEAQ7L5Y9 396 aa21.5■■□□□ 1.03
PDLIM2-205ENST00000397761 APTXQ7Z2E3 356 aaKnown RBP21.5■■□□□ 1.03
PDLIM2-205ENST00000397761 ZC3H3Q8IXZ2 948 aaKnown RBP21.5■■□□□ 1.03
PDLIM2-205ENST00000397761 EXOC8Q8IYI6 725 aa21.5■■□□□ 1.03
PDLIM2-205ENST00000397761 SLC7A3Q8WY07 619 aa21.5■■□□□ 1.03
PDLIM2-205ENST00000397761 SCN10AQ9Y5Y9 1956 aa21.5■■□□□ 1.03
PDLIM2-205ENST00000397761 TRIP12Q14669 1992 aaPredicted RBP21.49■■□□□ 1.03
PDLIM2-205ENST00000397761 COL1A2P08123 1366 aa21.49■■□□□ 1.03
PDLIM2-205ENST00000397761 PDXKO00764 312 aa21.49■■□□□ 1.03
PDLIM2-205ENST00000397761 DYNC1LI2O43237 492 aaPredicted RBP21.49■■□□□ 1.03
PDLIM2-205ENST00000397761 GAS2O43903 313 aaKnown RBP21.49■■□□□ 1.03
PDLIM2-205ENST00000397761 DUSP11O75319 330 aaKnown RBP21.49■■□□□ 1.03
PDLIM2-205ENST00000397761 MARK3P27448 753 aa21.49■■□□□ 1.03
PDLIM2-205ENST00000397761 ARL2P36404 184 aa21.49■■□□□ 1.03
PDLIM2-205ENST00000397761 NKX3-2P78367 333 aa21.49■■□□□ 1.03
PDLIM2-205ENST00000397761 FANCCQ00597 558 aa21.49■■□□□ 1.03
PDLIM2-205ENST00000397761 EDRF1Q3B7T1 1238 aa21.49■■□□□ 1.03
PDLIM2-205ENST00000397761 CSGALNACT2Q8N6G5 542 aa21.49■■□□□ 1.03
PDLIM2-205ENST00000397761 TRIM5Q9C035 493 aa21.49■■□□□ 1.03
PDLIM2-205ENST00000397761 RNPEPQ9H4A4 650 aa21.49■■□□□ 1.03
PDLIM2-205ENST00000397761 ZNF215Q9UL58 517 aaPredicted RBP21.49■■□□□ 1.03
PDLIM2-205ENST00000397761 TRAF3IP3Q9Y228 551 aa21.49■■□□□ 1.03
PDLIM2-205ENST00000397761 PCDHB13Q9Y5F0 798 aa21.49■■□□□ 1.03
PDLIM2-205ENST00000397761 ZMYM2Q9UBW7 1377 aa21.48■■□□□ 1.03
PDLIM2-205ENST00000397761 LRRC10BA6NIK2 292 aa21.48■■□□□ 1.03
PDLIM2-205ENST00000397761 H3BRB1 525 aa21.48■■□□□ 1.03
PDLIM2-205ENST00000397761 PRPF6O94906 941 aaKnown RBP21.48■■□□□ 1.03
PDLIM2-205ENST00000397761 ZNF286BP0CG31 522 aa21.48■■□□□ 1.03
PDLIM2-205ENST00000397761 LBX1P52954 281 aa21.48■■□□□ 1.03
PDLIM2-205ENST00000397761 GTF2BQ00403 316 aa21.48■■□□□ 1.03
PDLIM2-205ENST00000397761 PLCB2Q00722 1185 aa21.48■■□□□ 1.03
PDLIM2-205ENST00000397761 SPAG1Q07617 926 aa21.48■■□□□ 1.03
PDLIM2-205ENST00000397761 TPD52L1Q16890 204 aaPredicted RBP21.48■■□□□ 1.03
PDLIM2-205ENST00000397761 ZNF484Q5JVG2 852 aa21.48■■□□□ 1.03
PDLIM2-205ENST00000397761 LRRC55Q6ZSA7 311 aa21.48■■□□□ 1.03
PDLIM2-205ENST00000397761 PXYLP1Q8TE99 480 aa21.48■■□□□ 1.03
PDLIM2-205ENST00000397761 BSNDQ8WZ55 320 aa21.48■■□□□ 1.03
PDLIM2-205ENST00000397761 TUT1Q9H6E5 874 aaKnown RBP21.48■■□□□ 1.03
PDLIM2-205ENST00000397761 KCNG1Q9UIX4 513 aa21.48■■□□□ 1.03
PDLIM2-205ENST00000397761 CDC25BP30305 580 aa21.47■■□□□ 1.03
PDLIM2-205ENST00000397761 NPTX2P47972 431 aa21.47■■□□□ 1.03
PDLIM2-205ENST00000397761 CPT1AP50416 773 aa21.47■■□□□ 1.03
PDLIM2-205ENST00000397761 SOX10P56693 466 aa21.47■■□□□ 1.03
PDLIM2-205ENST00000397761 CACNB2Q08289 660 aaPredicted RBP21.47■■□□□ 1.03
PDLIM2-205ENST00000397761 TBC1D8BQ0IIM8 1120 aa21.47■■□□□ 1.03
PDLIM2-205ENST00000397761 DMP1Q13316 513 aaPredicted RBP21.47■■□□□ 1.03
PDLIM2-205ENST00000397761 ZC2HC1CQ53FD0 456 aaPredicted RBP21.47■■□□□ 1.03
PDLIM2-205ENST00000397761 MAP3K21Q5TCX8 1036 aa21.47■■□□□ 1.03
PDLIM2-205ENST00000397761 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.47■■□□□ 1.03
PDLIM2-205ENST00000397761 ZNF296Q8WUU4 475 aaPredicted RBP21.47■■□□□ 1.03
PDLIM2-205ENST00000397761 LENG1Q96BZ8 264 aaPredicted RBP21.47■■□□□ 1.03
PDLIM2-205ENST00000397761 HVCN1Q96D96 273 aa21.47■■□□□ 1.03
PDLIM2-205ENST00000397761 TSG101Q99816 390 aa21.47■■□□□ 1.03
PDLIM2-205ENST00000397761 SRRTQ9BXP5 876 aaKnown RBP21.47■■□□□ 1.03
PDLIM2-205ENST00000397761 POLR3FQ9H1D9 316 aaPredicted RBP21.47■■□□□ 1.03
PDLIM2-205ENST00000397761 UPF3AQ9H1J1 476 aaKnown RBP21.47■■□□□ 1.03
PDLIM2-205ENST00000397761 TYW1Q9NV66 732 aaKnown RBP21.47■■□□□ 1.03
PDLIM2-205ENST00000397761 LIMA1Q9UHB6 759 aaKnown RBP21.47■■□□□ 1.03
PDLIM2-205ENST00000397761 SEPT4O43236 478 aa21.46■■□□□ 1.03
PDLIM2-205ENST00000397761 F2P00734 622 aa21.46■■□□□ 1.03
PDLIM2-205ENST00000397761 SCP2P22307 547 aa21.46■■□□□ 1.03
PDLIM2-205ENST00000397761 EEF1GP26641 437 aaKnown RBP21.46■■□□□ 1.03
PDLIM2-205ENST00000397761 PRMT2P55345 433 aa21.46■■□□□ 1.03
PDLIM2-205ENST00000397761 PEX3P56589 373 aa21.46■■□□□ 1.03
PDLIM2-205ENST00000397761 KCNA1Q09470 495 aa21.46■■□□□ 1.03
PDLIM2-205ENST00000397761 ARHGEF6Q15052 776 aa21.46■■□□□ 1.03
PDLIM2-205ENST00000397761 NFIL3Q16649 462 aa21.46■■□□□ 1.03
PDLIM2-205ENST00000397761 HAUS6Q7Z4H7 955 aa21.46■■□□□ 1.03
PDLIM2-205ENST00000397761 NELFCDQ8IXH7 590 aa21.46■■□□□ 1.03
PDLIM2-205ENST00000397761 TMEM161BQ8NDZ6 487 aa21.46■■□□□ 1.03
PDLIM2-205ENST00000397761 JPH2Q9BR39 696 aaPredicted RBP21.46■■□□□ 1.03
PDLIM2-205ENST00000397761 AP5M1Q9H0R1 490 aa21.46■■□□□ 1.03
PDLIM2-205ENST00000397761 TRPC6Q9Y210 931 aa21.46■■□□□ 1.03
PDLIM2-205ENST00000397761 K7ENM7 598 aa21.45■■□□□ 1.03
PDLIM2-205ENST00000397761 TGFB1I1O43294 461 aa21.45■■□□□ 1.03
PDLIM2-205ENST00000397761 ADCY3O60266 1144 aa21.45■■□□□ 1.03
PDLIM2-205ENST00000397761 HMGCRP04035 888 aa21.45■■□□□ 1.03
PDLIM2-205ENST00000397761 SMTNP53814 917 aa21.45■■□□□ 1.03
PDLIM2-205ENST00000397761 GJA9P57773 515 aa21.45■■□□□ 1.03
PDLIM2-205ENST00000397761 FKBP3Q00688 224 aaKnown RBP21.45■■□□□ 1.03
PDLIM2-205ENST00000397761 TRIM32Q13049 653 aa21.45■■□□□ 1.03
PDLIM2-205ENST00000397761 BRDTQ58F21 947 aaPredicted RBP21.45■■□□□ 1.03
PDLIM2-205ENST00000397761 HSP90AA4PQ58FG1 418 aa21.45■■□□□ 1.03
PDLIM2-205ENST00000397761 TCP11X2Q5H9J9 407 aa21.45■■□□□ 1.03
PDLIM2-205ENST00000397761 TMEM174Q8WUU8 243 aa21.45■■□□□ 1.03
PDLIM2-205ENST00000397761 CEP63Q96MT8 703 aa21.45■■□□□ 1.03
PDLIM2-205ENST00000397761 XPO4Q9C0E2 1151 aaKnown RBP21.45■■□□□ 1.03
PDLIM2-205ENST00000397761 IFNKQ9P0W0 207 aa21.45■■□□□ 1.03
PDLIM2-205ENST00000397761 KCNJ18B7U540 433 aa21.45■■□□□ 1.02
PDLIM2-205ENST00000397761 C22orf31O95567 290 aa21.45■■□□□ 1.02
PDLIM2-205ENST00000397761 FGFR1OPO95684 399 aaKnown RBP21.45■■□□□ 1.02
PDLIM2-205ENST00000397761 INSRRP14616 1297 aa21.45■■□□□ 1.02
PDLIM2-205ENST00000397761 ELNP15502 786 aa21.45■■□□□ 1.02
PDLIM2-205ENST00000397761 CDK11BP21127 795 aaKnown RBP21.45■■□□□ 1.02
PDLIM2-205ENST00000397761 MKRN4PQ13434 485 aaPredicted RBP21.45■■□□□ 1.02
PDLIM2-205ENST00000397761 KCNJ12Q14500 433 aa21.45■■□□□ 1.02
PDLIM2-205ENST00000397761 PPP2R5AQ15172 486 aa21.45■■□□□ 1.02
PDLIM2-205ENST00000397761 IER5Q5VY09 327 aa21.45■■□□□ 1.02
PDLIM2-205ENST00000397761 FAM114A1Q8IWE2 563 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms