RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 MIS18BP1Q6P0N0 1132 aa18.28■□□□□ 0.52
CUX2-202ENST00000397643 TMC7Q7Z402 723 aa18.28■□□□□ 0.52
CUX2-202ENST00000397643 PLA2G4DQ86XP0 818 aa18.28■□□□□ 0.52
CUX2-202ENST00000397643 ECHDC2Q86YB7 292 aa18.28■□□□□ 0.52
CUX2-202ENST00000397643 MRPL43Q8N983 215 aaKnown RBP18.28■□□□□ 0.52
CUX2-202ENST00000397643 NECTIN4Q96NY8 510 aa18.28■□□□□ 0.52
CUX2-202ENST00000397643 ADAMTS10Q9H324 1103 aa18.28■□□□□ 0.52
CUX2-202ENST00000397643 SPG21Q9NZD8 308 aa18.28■□□□□ 0.52
CUX2-202ENST00000397643 PRR23AA6NEV1 266 aa18.27■□□□□ 0.52
CUX2-202ENST00000397643 SMCO2A6NFE2 343 aa18.27■□□□□ 0.52
CUX2-202ENST00000397643 IPO5O00410 1097 aaKnown RBP18.27■□□□□ 0.52
CUX2-202ENST00000397643 NBL1P41271 181 aa18.27■□□□□ 0.52
CUX2-202ENST00000397643 ITIH3Q06033 890 aa18.27■□□□□ 0.52
CUX2-202ENST00000397643 SMC1AQ14683 1233 aaKnown RBP18.27■□□□□ 0.52
CUX2-202ENST00000397643 NECTIN1Q15223 517 aa18.27■□□□□ 0.52
CUX2-202ENST00000397643 TPRNQ4KMQ1 711 aa18.27■□□□□ 0.52
CUX2-202ENST00000397643 CREB3L3Q68CJ9 461 aa18.27■□□□□ 0.52
CUX2-202ENST00000397643 ZNF598Q86UK7 904 aaKnown RBP18.27■□□□□ 0.52
CUX2-202ENST00000397643 METTL13Q8N6R0 699 aa18.27■□□□□ 0.52
CUX2-202ENST00000397643 RBM28Q9NW13 759 aaKnown RBP18.27■□□□□ 0.52
CUX2-202ENST00000397643 BARHL2Q9NY43 387 aa18.27■□□□□ 0.52
CUX2-202ENST00000397643 WDR81Q562E7 1941 aa18.26■□□□□ 0.51
CUX2-202ENST00000397643 hCG_1984214I3L0E3 225 aa18.26■□□□□ 0.51
CUX2-202ENST00000397643 ADAMTS3O15072 1205 aa18.26■□□□□ 0.51
CUX2-202ENST00000397643 CYP3A4P08684 503 aa18.26■□□□□ 0.51
CUX2-202ENST00000397643 ZNF76P36508 570 aa18.26■□□□□ 0.51
CUX2-202ENST00000397643 NLRP11P59045 1033 aaKnown RBP18.26■□□□□ 0.51
CUX2-202ENST00000397643 KRT17Q04695 432 aa18.26■□□□□ 0.51
CUX2-202ENST00000397643 ZNF746Q6NUN9 644 aaPredicted RBP18.26■□□□□ 0.51
CUX2-202ENST00000397643 ZNF713Q8N859 430 aaPredicted RBP18.26■□□□□ 0.51
CUX2-202ENST00000397643 BRPF3Q9ULD4 1205 aa18.26■□□□□ 0.51
CUX2-202ENST00000397643 V9GY48 417 aaPredicted RBP18.26■□□□□ 0.51
CUX2-202ENST00000397643 DENND4AQ7Z401 1863 aa18.26■□□□□ 0.51
CUX2-202ENST00000397643 ASGR2P07307 311 aa18.25■□□□□ 0.51
CUX2-202ENST00000397643 WEE2P0C1S8 567 aa18.25■□□□□ 0.51
CUX2-202ENST00000397643 CES5AQ6NT32 575 aa18.25■□□□□ 0.51
CUX2-202ENST00000397643 CKAP2LQ8IYA6 745 aa18.25■□□□□ 0.51
CUX2-202ENST00000397643 ABI1Q8IZP0 508 aa18.25■□□□□ 0.51
CUX2-202ENST00000397643 FEZF2Q8TBJ5 459 aa18.25■□□□□ 0.51
CUX2-202ENST00000397643 FAM217BQ9NTX9 383 aaPredicted RBP18.25■□□□□ 0.51
CUX2-202ENST00000397643 A0A0U1RQF3 1178 aa18.24■□□□□ 0.51
CUX2-202ENST00000397643 MAGEB2O15479 319 aa18.24■□□□□ 0.51
CUX2-202ENST00000397643 EIF4BP23588 611 aaKnown RBP18.24■□□□□ 0.51
CUX2-202ENST00000397643 RTN1Q16799 776 aa18.24■□□□□ 0.51
CUX2-202ENST00000397643 JAKMIP3Q5VZ66 844 aa18.24■□□□□ 0.51
CUX2-202ENST00000397643 KIAA1841Q6NSI8 718 aa18.24■□□□□ 0.51
CUX2-202ENST00000397643 TRMT1LQ7Z2T5 733 aaKnown RBP18.24■□□□□ 0.51
CUX2-202ENST00000397643 TMEM173Q86WV6 379 aaPredicted RBP18.24■□□□□ 0.51
CUX2-202ENST00000397643 SMAP1Q8IYB5 467 aaPredicted RBP18.24■□□□□ 0.51
CUX2-202ENST00000397643 ZDHHC14Q8IZN3 488 aa18.24■□□□□ 0.51
CUX2-202ENST00000397643 LRRC71Q8N4P6 559 aa18.24■□□□□ 0.51
CUX2-202ENST00000397643 HELQQ8TDG4 1101 aa18.24■□□□□ 0.51
CUX2-202ENST00000397643 ZNF577Q9BSK1 485 aa18.24■□□□□ 0.51
CUX2-202ENST00000397643 GLT8D2Q9H1C3 349 aa18.24■□□□□ 0.51
CUX2-202ENST00000397643 TBC1D22BQ9NU19 505 aa18.24■□□□□ 0.51
CUX2-202ENST00000397643 GABBR1Q9UBS5 961 aa18.24■□□□□ 0.51
CUX2-202ENST00000397643 CEP131Q9UPN4 1083 aa18.24■□□□□ 0.51
CUX2-202ENST00000397643 AKT3Q9Y243 479 aa18.24■□□□□ 0.51
CUX2-202ENST00000397643 CACNA1AO00555 2505 aa18.24■□□□□ 0.51
CUX2-202ENST00000397643 NT5C1B-RDH14C9J2C7 533 aa18.23■□□□□ 0.51
CUX2-202ENST00000397643 ZNF862O60290 1169 aa18.23■□□□□ 0.51
CUX2-202ENST00000397643 DARSP14868 501 aaKnown RBP18.23■□□□□ 0.51
CUX2-202ENST00000397643 ZSCAN20P17040 1043 aaPredicted RBP18.23■□□□□ 0.51
CUX2-202ENST00000397643 MTHFRP42898 656 aa18.23■□□□□ 0.51
CUX2-202ENST00000397643 GPC3P51654 580 aa18.23■□□□□ 0.51
CUX2-202ENST00000397643 BCAR1P56945 870 aa18.23■□□□□ 0.51
CUX2-202ENST00000397643 FOXK2Q01167 660 aa18.23■□□□□ 0.51
CUX2-202ENST00000397643 RARS2Q5T160 578 aaKnown RBP18.23■□□□□ 0.51
CUX2-202ENST00000397643 ASTLQ6HA08 431 aaPredicted RBP18.23■□□□□ 0.51
CUX2-202ENST00000397643 EFCAB12Q6NXP0 572 aa18.23■□□□□ 0.51
CUX2-202ENST00000397643 KANK3Q6NY19 840 aa18.23■□□□□ 0.51
CUX2-202ENST00000397643 C12orf76Q8N812 135 aaPredicted RBP18.23■□□□□ 0.51
CUX2-202ENST00000397643 TDRD5Q8NAT2 981 aaKnown RBP18.23■□□□□ 0.51
CUX2-202ENST00000397643 RNF169Q8NCN4 708 aa18.23■□□□□ 0.51
CUX2-202ENST00000397643 ZNF668Q96K58 619 aaPredicted RBP18.23■□□□□ 0.51
CUX2-202ENST00000397643 MAP7D2Q96T17 732 aa18.23■□□□□ 0.51
CUX2-202ENST00000397643 ESYT1Q9BSJ8 1104 aa18.23■□□□□ 0.51
CUX2-202ENST00000397643 ZBP1Q9H171 429 aa18.23■□□□□ 0.51
CUX2-202ENST00000397643 PCDHA10Q9Y5I2 948 aa18.23■□□□□ 0.51
CUX2-202ENST00000397643 ZBTB43O43298 467 aa18.22■□□□□ 0.51
CUX2-202ENST00000397643 PSAPP07602 524 aa18.22■□□□□ 0.51
CUX2-202ENST00000397643 FGFR4P22455 802 aa18.22■□□□□ 0.51
CUX2-202ENST00000397643 CDC27P30260 824 aa18.22■□□□□ 0.51
CUX2-202ENST00000397643 METAP2P50579 478 aaKnown RBP eCLIP18.22■□□□□ 0.51
CUX2-202ENST00000397643 SETQ01105 290 aaPredicted RBP18.22■□□□□ 0.51
CUX2-202ENST00000397643 CWF19L1Q69YN2 538 aaKnown RBP18.22■□□□□ 0.51
CUX2-202ENST00000397643 SYNE3Q6ZMZ3 975 aa18.22■□□□□ 0.51
CUX2-202ENST00000397643 LENG9Q96B70 501 aa18.22■□□□□ 0.51
CUX2-202ENST00000397643 FAM167AQ96KS9 214 aa18.22■□□□□ 0.51
CUX2-202ENST00000397643 TCEANC2Q96MN5 208 aa18.22■□□□□ 0.51
CUX2-202ENST00000397643 USTQ9Y2C2 406 aa18.22■□□□□ 0.51
CUX2-202ENST00000397643 ESYT2A0FGR8 921 aa18.21■□□□□ 0.51
CUX2-202ENST00000397643 EOMESO95936 686 aa18.21■□□□□ 0.51
CUX2-202ENST00000397643 EPCAMP16422 314 aa18.21■□□□□ 0.51
CUX2-202ENST00000397643 EXOSC10Q01780 885 aaKnown RBP18.21■□□□□ 0.51
CUX2-202ENST00000397643 SLC22A17Q8WUG5 538 aa18.21■□□□□ 0.51
CUX2-202ENST00000397643 BCL7CQ8WUZ0 217 aaPredicted RBP18.21■□□□□ 0.51
CUX2-202ENST00000397643 AUTS2Q8WXX7 1259 aa18.21■□□□□ 0.51
CUX2-202ENST00000397643 MRPL9Q9BYD2 267 aaKnown RBP18.21■□□□□ 0.51
CUX2-202ENST00000397643 DZANK1Q9NVP4 752 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms