RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 SLITRK6Q9H5Y7 841 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 Q9Y3F1 56 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 ANKRD62A6NC57 917 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 PPP1R12AO14974 1030 aaPredicted RBP6.4□□□□□ -1.39
PTPRD-206ENST00000397617 TMCO3Q6UWJ1 677 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 CCDC24Q8N4L8 307 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 ACER1Q8TDN7 264 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 CEP89Q96ST8 783 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 SEMA6BQ9H3T3 888 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 OGFRQ9NZT2 677 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 DDX41Q9UJV9 622 aaKnown RBP6.4□□□□□ -1.39
PTPRD-206ENST00000397617 CTNND2Q9UQB3 1225 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 RBM47A0AV96 593 aaKnown RBP6.39□□□□□ -1.39
PTPRD-206ENST00000397617 STILQ15468 1287 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 KCTD1Q719H9 257 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 SPATA18Q8TC71 538 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 TBC1D5Q92609 795 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 AGTPBP1Q9UPW5 1226 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 TMEM253P0C7T8 217 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 KCNH2Q12809 1159 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 EMC10Q5UCC4 262 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 KRT39Q6A163 491 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 WDR59Q6PJI9 974 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 HHIPL1Q96JK4 782 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 R3HCC1Q9Y3T6 440 aaKnown RBP6.39□□□□□ -1.39
PTPRD-206ENST00000397617 ASTN2O75129 1339 aaPredicted RBP6.39□□□□□ -1.39
PTPRD-206ENST00000397617 CARNS1A5YM72 827 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 SMIM22K7EJ46 135 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 UCHL3P15374 230 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 CHMP4BP1P59074 171 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 ATP2B2Q01814 1243 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 BFSP1Q12934 665 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 DMP1Q13316 513 aaPredicted RBP6.39□□□□□ -1.39
PTPRD-206ENST00000397617 LRRC38Q5VT99 294 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 IER5Q5VY09 327 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 HGSNATQ68CP4 663 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 AGO4Q9HCK5 861 aaKnown RBP6.39□□□□□ -1.39
PTPRD-206ENST00000397617 CYP39A1Q9NYL5 469 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 IGKV6-21A0A0C4DH24 114 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 PRR29P0C7W0 189 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 SNX16P57768 344 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 KRT222Q8N1A0 295 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 RFFLQ8WZ73 363 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 SLCO2A1Q92959 643 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 SECISBP2LQ93073 1101 aaKnown RBP6.39□□□□□ -1.39
PTPRD-206ENST00000397617 REEP2Q9BRK0 252 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 CCDC94Q9BW85 323 aaPredicted RBP6.39□□□□□ -1.39
PTPRD-206ENST00000397617 VEZTQ9HBM0 779 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 NAGPAQ9UK23 515 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 A0A0G2JLL6 359 aaPredicted RBP6.39□□□□□ -1.39
PTPRD-206ENST00000397617 POTEB3A0JP26 581 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 POTECB2RU33 542 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 FOXN1O15353 648 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 THAP12O43422 761 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 LSM8O95777 96 aaKnown RBP6.39□□□□□ -1.39
PTPRD-206ENST00000397617 POTEJP0CG39 1038 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 MYBL1P10243 752 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 FAM187BQ17R55 369 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 CFAP221Q4G0U5 840 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 POTEBQ6S5H4 581 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 PRRT2Q7Z6L0 340 aaPredicted RBP6.39□□□□□ -1.39
PTPRD-206ENST00000397617 BBXQ8WY36 941 aaPredicted RBP6.39□□□□□ -1.39
PTPRD-206ENST00000397617 SEC14L1Q92503 715 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 VAT1LQ9HCJ6 419 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 PSD3Q9NYI0 1048 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 SNX12Q9UMY4 172 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 CCDC122Q5T0U0 273 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 MAATS1Q7Z4T9 603 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 ARFGAP2Q8N6H7 521 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 FNIP1Q8TF40 1166 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 GANQ9H2C0 597 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 SUCLA2Q9P2R7 463 aaPredicted RBP6.39□□□□□ -1.39
PTPRD-206ENST00000397617 AFG3L2Q9Y4W6 797 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 F8W031 263 aaPredicted RBP6.39□□□□□ -1.39
PTPRD-206ENST00000397617 RIOK3O14730 519 aaKnown RBP6.39□□□□□ -1.39
PTPRD-206ENST00000397617 PPFIA4O75335 1185 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 KIF4AO95239 1232 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 SCNN1AP37088 669 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 FMO5P49326 533 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 MXI1P50539 228 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 KIF11P52732 1056 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 PGM5Q15124 567 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 HAUS6Q7Z4H7 955 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 ZFPM1Q8IX07 1006 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 TMEM8AQ9HCN3 771 aa6.39□□□□□ -1.39
PTPRD-206ENST00000397617 MED24O75448 989 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 LGR5O75473 907 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 CETN2P41208 172 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 RAD9BQ6WBX8 426 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 SEPT1Q8WYJ6 367 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 TMEM39BQ9GZU3 492 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 ASB7Q9H672 318 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 hCG_1642624A0A1W2PR95 340 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 SPDYE16A6NNV3 312 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-206ENST00000397617 GPC3P51654 580 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 TNNC1P63316 161 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 TAP1Q03518 808 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 TCP10Q12799 353 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 SPP2Q13103 211 aa6.38□□□□□ -1.39
PTPRD-206ENST00000397617 CUL1Q13616 776 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms