RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 RABGGTBP53611 331 aa28.23■■■□□ 2.11
TSPAN4-207ENST00000397411 STK38Q15208 465 aa28.23■■■□□ 2.11
TSPAN4-207ENST00000397411 ECM1Q16610 540 aa28.23■■■□□ 2.11
TSPAN4-207ENST00000397411 FOXD4L6Q3SYB3 417 aaPredicted RBP28.23■■■□□ 2.11
TSPAN4-207ENST00000397411 FAM117BQ6P1L5 589 aa28.23■■■□□ 2.11
TSPAN4-207ENST00000397411 FOXD4L3Q6VB84 417 aaPredicted RBP28.23■■■□□ 2.11
TSPAN4-207ENST00000397411 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.23■■■□□ 2.11
TSPAN4-207ENST00000397411 HERC6Q8IVU3 1022 aa28.23■■■□□ 2.11
TSPAN4-207ENST00000397411 MYOCDQ8IZQ8 938 aa28.23■■■□□ 2.11
TSPAN4-207ENST00000397411 RASSF8Q8NHQ8 419 aa28.23■■■□□ 2.11
TSPAN4-207ENST00000397411 PRPF31Q8WWY3 499 aaKnown RBP28.23■■■□□ 2.11
TSPAN4-207ENST00000397411 NLRP4Q96MN2 994 aa28.23■■■□□ 2.11
TSPAN4-207ENST00000397411 USP28Q96RU2 1077 aa28.23■■■□□ 2.11
TSPAN4-207ENST00000397411 FTHL17Q9BXU8 183 aa28.23■■■□□ 2.11
TSPAN4-207ENST00000397411 TFIP11Q9UBB9 837 aaKnown RBP28.23■■■□□ 2.11
TSPAN4-207ENST00000397411 COL4A3BPQ9Y5P4 624 aa28.23■■■□□ 2.11
TSPAN4-207ENST00000397411 SRGAP2CP0DJJ0 459 aa28.22■■■□□ 2.11
TSPAN4-207ENST00000397411 EIF4BP23588 611 aaKnown RBP28.22■■■□□ 2.11
TSPAN4-207ENST00000397411 LONP1P36776 959 aaKnown RBP28.22■■■□□ 2.11
TSPAN4-207ENST00000397411 DEFB103AP81534 67 aa28.22■■■□□ 2.11
TSPAN4-207ENST00000397411 MAEAQ7L5Y9 396 aa28.22■■■□□ 2.11
TSPAN4-207ENST00000397411 CABP7Q86V35 215 aa28.22■■■□□ 2.11
TSPAN4-207ENST00000397411 KSR1Q8IVT5 923 aa28.22■■■□□ 2.11
TSPAN4-207ENST00000397411 INO80BQ9C086 356 aaPredicted RBP28.22■■■□□ 2.11
TSPAN4-207ENST00000397411 DAXXQ9UER7 740 aaPredicted RBP28.22■■■□□ 2.11
TSPAN4-207ENST00000397411 ST3GAL5Q9UNP4 418 aa28.22■■■□□ 2.11
TSPAN4-207ENST00000397411 MICAL3Q7RTP6 2002 aa28.21■■■□□ 2.11
TSPAN4-207ENST00000397411 A0A087WZ62 844 aa28.21■■■□□ 2.11
TSPAN4-207ENST00000397411 PTPAQ15257 358 aa28.21■■■□□ 2.11
TSPAN4-207ENST00000397411 PADI6Q6TGC4 694 aa28.21■■■□□ 2.11
TSPAN4-207ENST00000397411 ZNF410Q86VK4 478 aa28.21■■■□□ 2.11
TSPAN4-207ENST00000397411 TMEM40Q8WWA1 233 aa28.21■■■□□ 2.11
TSPAN4-207ENST00000397411 CALML4Q96GE6 196 aa28.21■■■□□ 2.11
TSPAN4-207ENST00000397411 PLIN2Q99541 437 aa28.21■■■□□ 2.11
TSPAN4-207ENST00000397411 FDXACB1Q9BRP7 624 aaPredicted RBP28.21■■■□□ 2.11
TSPAN4-207ENST00000397411 PBX4Q9BYU1 374 aa28.21■■■□□ 2.11
TSPAN4-207ENST00000397411 BHMT2Q9H2M3 363 aa28.21■■■□□ 2.11
TSPAN4-207ENST00000397411 ERVK-5Q9HDB9 667 aa28.21■■■□□ 2.11
TSPAN4-207ENST00000397411 ENPP3O14638 875 aa28.2■■■□□ 2.1
TSPAN4-207ENST00000397411 UPP2O95045 317 aa28.2■■■□□ 2.1
TSPAN4-207ENST00000397411 DARSP14868 501 aaKnown RBP28.2■■■□□ 2.1
TSPAN4-207ENST00000397411 DNAJB2P25686 324 aa28.2■■■□□ 2.1
TSPAN4-207ENST00000397411 PBX2P40425 430 aa28.2■■■□□ 2.1
TSPAN4-207ENST00000397411 LAMTOR4Q0VGL1 99 aa28.2■■■□□ 2.1
TSPAN4-207ENST00000397411 MXD4Q14582 209 aaPredicted RBP28.2■■■□□ 2.1
TSPAN4-207ENST00000397411 GPR153Q6NV75 609 aa28.2■■■□□ 2.1
TSPAN4-207ENST00000397411 MCPH1Q8NEM0 835 aa28.2■■■□□ 2.1
TSPAN4-207ENST00000397411 TIFAQ96CG3 184 aa28.2■■■□□ 2.1
TSPAN4-207ENST00000397411 MMTAG2Q9BU76 263 aaKnown RBP28.2■■■□□ 2.1
TSPAN4-207ENST00000397411 NT5C3AQ9H0P0 336 aa28.2■■■□□ 2.1
TSPAN4-207ENST00000397411 PCDHA11Q9Y5I1 949 aa28.2■■■□□ 2.1
TSPAN4-207ENST00000397411 DENND3A2RUS2 1198 aa28.19■■■□□ 2.1
TSPAN4-207ENST00000397411 E9PMD0 336 aa28.19■■■□□ 2.1
TSPAN4-207ENST00000397411 TLL1O43897 1013 aa28.19■■■□□ 2.1
TSPAN4-207ENST00000397411 PKP1Q13835 747 aa28.19■■■□□ 2.1
TSPAN4-207ENST00000397411 TFDP1Q14186 410 aa28.19■■■□□ 2.1
TSPAN4-207ENST00000397411 SLC39A14Q15043 492 aa28.19■■■□□ 2.1
TSPAN4-207ENST00000397411 FAM102BQ5T8I3 360 aa28.19■■■□□ 2.1
TSPAN4-207ENST00000397411 ZNF697Q5TEC3 545 aa28.19■■■□□ 2.1
TSPAN4-207ENST00000397411 FAM43BQ6ZT52 329 aaPredicted RBP28.19■■■□□ 2.1
TSPAN4-207ENST00000397411 TMCO2Q7Z6W1 182 aaPredicted RBP28.19■■■□□ 2.1
TSPAN4-207ENST00000397411 FAM228AQ86W67 206 aa28.19■■■□□ 2.1
TSPAN4-207ENST00000397411 SRPRBQ9Y5M8 271 aaKnown RBP28.19■■■□□ 2.1
TSPAN4-207ENST00000397411 RANBP2P49792 3224 aaKnown RBP28.19■■■□□ 2.1
TSPAN4-207ENST00000397411 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.18■■■□□ 2.1
TSPAN4-207ENST00000397411 EYA4O95677 639 aa28.18■■■□□ 2.1
TSPAN4-207ENST00000397411 SSBP05455 408 aaKnown RBP eCLIP28.18■■■□□ 2.1
TSPAN4-207ENST00000397411 IBSPP21815 317 aaPredicted RBP28.18■■■□□ 2.1
TSPAN4-207ENST00000397411 POLR3FQ9H1D9 316 aaPredicted RBP28.18■■■□□ 2.1
TSPAN4-207ENST00000397411 XPNPEP1Q9NQW7 623 aa28.18■■■□□ 2.1
TSPAN4-207ENST00000397411 SLC26A4O43511 780 aa28.17■■■□□ 2.1
TSPAN4-207ENST00000397411 CSDE1O75534 798 aaKnown RBP28.17■■■□□ 2.1
TSPAN4-207ENST00000397411 ZSCAN20P17040 1043 aaPredicted RBP28.17■■■□□ 2.1
TSPAN4-207ENST00000397411 CYP11B2P19099 503 aa28.17■■■□□ 2.1
TSPAN4-207ENST00000397411 GRIN1Q05586 938 aa28.17■■■□□ 2.1
TSPAN4-207ENST00000397411 KCTD17Q8N5Z5 321 aa28.17■■■□□ 2.1
TSPAN4-207ENST00000397411 RNF149Q8NC42 400 aa28.17■■■□□ 2.1
TSPAN4-207ENST00000397411 CSRNP2Q9H175 543 aa28.17■■■□□ 2.1
TSPAN4-207ENST00000397411 NKX2-4Q9H2Z4 354 aa28.17■■■□□ 2.1
TSPAN4-207ENST00000397411 SLC28A3Q9HAS3 691 aa28.17■■■□□ 2.1
TSPAN4-207ENST00000397411 MYH15Q9Y2K3 1946 aa28.17■■■□□ 2.1
TSPAN4-207ENST00000397411 GBF1Q92538 1859 aa28.17■■■□□ 2.1
TSPAN4-207ENST00000397411 MYOGP15173 224 aa28.16■■■□□ 2.1
TSPAN4-207ENST00000397411 FGFR4P22455 802 aa28.16■■■□□ 2.1
TSPAN4-207ENST00000397411 SFPQP23246 707 aaKnown RBP eCLIP28.16■■■□□ 2.12e-6■■■■□ 23.9
TSPAN4-207ENST00000397411 PHKA2P46019 1235 aa28.16■■■□□ 2.1
TSPAN4-207ENST00000397411 NASPP49321 788 aaPredicted RBP28.16■■■□□ 2.1
TSPAN4-207ENST00000397411 KRI1Q8N9T8 703 aaKnown RBP28.16■■■□□ 2.1
TSPAN4-207ENST00000397411 PNMA5Q96PV4 448 aa28.16■■■□□ 2.1
TSPAN4-207ENST00000397411 ADAM2Q99965 735 aa28.16■■■□□ 2.1
TSPAN4-207ENST00000397411 TMX1Q9H3N1 280 aa28.16■■■□□ 2.1
TSPAN4-207ENST00000397411 FBXO2Q9UK22 296 aaPredicted RBP28.16■■■□□ 2.1
TSPAN4-207ENST00000397411 GJB5O95377 273 aa28.15■■■□□ 2.1
TSPAN4-207ENST00000397411 ARL2P36404 184 aa28.15■■■□□ 2.1
TSPAN4-207ENST00000397411 TXLNAP40222 546 aa28.15■■■□□ 2.1
TSPAN4-207ENST00000397411 GRB10Q13322 594 aa28.15■■■□□ 2.1
TSPAN4-207ENST00000397411 HYIQ5T013 277 aa28.15■■■□□ 2.1
TSPAN4-207ENST00000397411 CATSPER4Q7RTX7 472 aa28.15■■■□□ 2.1
TSPAN4-207ENST00000397411 RTN4RL1Q86UN2 441 aaPredicted RBP28.15■■■□□ 2.1
TSPAN4-207ENST00000397411 DEFB123Q8N688 67 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 665 ms