RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 VPS54Q9P1Q0 977 aa15.43■□□□□ 0.06
SEC13-205ENST00000397101 PUF60Q9UHX1 559 aaKnown RBP15.43■□□□□ 0.06
SEC13-205ENST00000397101 SORCS3Q9UPU3 1222 aa15.43■□□□□ 0.06
SEC13-205ENST00000397101 PLXNA4Q9HCM2 1894 aa15.43■□□□□ 0.06
SEC13-205ENST00000397101 NFASCO94856 1347 aa15.43■□□□□ 0.06
SEC13-205ENST00000397101 PLXNA3P51805 1871 aa15.42■□□□□ 0.06
SEC13-205ENST00000397101 PRR23AA6NEV1 266 aa15.42■□□□□ 0.06
SEC13-205ENST00000397101 C9IYK1 514 aa15.42■□□□□ 0.06
SEC13-205ENST00000397101 STX6O43752 255 aa15.42■□□□□ 0.06
SEC13-205ENST00000397101 SYT1P21579 422 aa15.42■□□□□ 0.06
SEC13-205ENST00000397101 TECP42680 631 aa15.42■□□□□ 0.06
SEC13-205ENST00000397101 FAM189BP81408 668 aa15.42■□□□□ 0.06
SEC13-205ENST00000397101 RBM10P98175 930 aaKnown RBP15.42■□□□□ 0.06
SEC13-205ENST00000397101 MTMR3Q13615 1198 aa15.42■□□□□ 0.06
SEC13-205ENST00000397101 SAFBQ15424 915 aaKnown RBP eCLIP15.42■□□□□ 0.06
SEC13-205ENST00000397101 SPOUT1Q5T280 376 aaKnown RBP15.42■□□□□ 0.06
SEC13-205ENST00000397101 FOXD4L5Q5VV16 416 aaPredicted RBP15.42■□□□□ 0.06
SEC13-205ENST00000397101 WWC2Q6AWC2 1192 aa15.42■□□□□ 0.06
SEC13-205ENST00000397101 THNSL1Q8IYQ7 743 aa15.42■□□□□ 0.06
SEC13-205ENST00000397101 COLGALT1Q8NBJ5 622 aa15.42■□□□□ 0.06
SEC13-205ENST00000397101 CCDC148Q8NFR7 591 aa15.42■□□□□ 0.06
SEC13-205ENST00000397101 FOXD4L4Q8WXT5 416 aaPredicted RBP15.42■□□□□ 0.06
SEC13-205ENST00000397101 CWH43Q9H720 699 aa15.42■□□□□ 0.06
SEC13-205ENST00000397101 PSTPIP2Q9H939 334 aa15.42■□□□□ 0.06
SEC13-205ENST00000397101 TYW1Q9NV66 732 aaKnown RBP15.42■□□□□ 0.06
SEC13-205ENST00000397101 TMEM260Q9NX78 707 aa15.42■□□□□ 0.06
SEC13-205ENST00000397101 SLC9A2Q9UBY0 812 aa15.42■□□□□ 0.06
SEC13-205ENST00000397101 TRPC6Q9Y210 931 aa15.42■□□□□ 0.06
SEC13-205ENST00000397101 TBKBP1A7MCY6 615 aa15.41■□□□□ 0.06
SEC13-205ENST00000397101 hCG_1984214I3L0E3 225 aa15.41■□□□□ 0.06
SEC13-205ENST00000397101 GPR182O15218 404 aa15.41■□□□□ 0.06
SEC13-205ENST00000397101 MGEA5O60502 916 aa15.41■□□□□ 0.06
SEC13-205ENST00000397101 RPS6KA5O75582 802 aa15.41■□□□□ 0.06
SEC13-205ENST00000397101 ATG7O95352 703 aa15.41■□□□□ 0.06
SEC13-205ENST00000397101 PDIA4P13667 645 aaKnown RBP15.41■□□□□ 0.06
SEC13-205ENST00000397101 STAT5BP51692 787 aa15.41■□□□□ 0.06
SEC13-205ENST00000397101 NUCB2P80303 420 aa15.41■□□□□ 0.06
SEC13-205ENST00000397101 ITIH3Q06033 890 aa15.41■□□□□ 0.06
SEC13-205ENST00000397101 TMEM62Q0P6H9 643 aa15.41■□□□□ 0.06
SEC13-205ENST00000397101 NFX1Q12986 1120 aaKnown RBP15.41■□□□□ 0.06
SEC13-205ENST00000397101 MTHFD1LQ6UB35 978 aa15.41■□□□□ 0.06
SEC13-205ENST00000397101 ASCL5Q7RTU5 278 aa15.41■□□□□ 0.06
SEC13-205ENST00000397101 ZBTB33Q86T24 672 aa15.41■□□□□ 0.06
SEC13-205ENST00000397101 ZNF713Q8N859 430 aaPredicted RBP15.41■□□□□ 0.06
SEC13-205ENST00000397101 KREMEN2Q8NCW0 462 aa15.41■□□□□ 0.06
SEC13-205ENST00000397101 CASP10Q92851 521 aa15.41■□□□□ 0.06
SEC13-205ENST00000397101 ZBTB10Q96DT7 871 aa15.41■□□□□ 0.06
SEC13-205ENST00000397101 BRMS1Q9HCU9 246 aa15.41■□□□□ 0.06
SEC13-205ENST00000397101 TMEM161AQ9NX61 479 aa15.41■□□□□ 0.06
SEC13-205ENST00000397101 CHMP5Q9NZZ3 219 aa15.41■□□□□ 0.06
SEC13-205ENST00000397101 KCNJ14Q9UNX9 436 aa15.41■□□□□ 0.06
SEC13-205ENST00000397101 FNDC1Q4ZHG4 1894 aaPredicted RBP15.41■□□□□ 0.06
SEC13-205ENST00000397101 DENND3A2RUS2 1198 aa15.4■□□□□ 0.06
SEC13-205ENST00000397101 SPDYE3A6NKU9 549 aa15.4■□□□□ 0.06
SEC13-205ENST00000397101 PDGFBP01127 241 aaPredicted RBP15.4■□□□□ 0.06
SEC13-205ENST00000397101 PPM1AP35813 382 aa15.4■□□□□ 0.06
SEC13-205ENST00000397101 TMEM266Q2M3C6 531 aa15.4■□□□□ 0.06
SEC13-205ENST00000397101 TPRNQ4KMQ1 711 aa15.4■□□□□ 0.06
SEC13-205ENST00000397101 FAM102BQ5T8I3 360 aa15.4■□□□□ 0.06
SEC13-205ENST00000397101 ADAM2Q99965 735 aa15.4■□□□□ 0.06
SEC13-205ENST00000397101 ADAM7Q9H2U9 754 aa15.4■□□□□ 0.06
SEC13-205ENST00000397101 ATP6V0A4Q9HBG4 840 aa15.4■□□□□ 0.06
SEC13-205ENST00000397101 C6orf50Q9HD87 102 aa15.4■□□□□ 0.06
SEC13-205ENST00000397101 SH3GLB2Q9NR46 395 aa15.4■□□□□ 0.06
SEC13-205ENST00000397101 KCNH7Q9NS40 1196 aa15.4■□□□□ 0.06
SEC13-205ENST00000397101 GJB4Q9NTQ9 266 aa15.4■□□□□ 0.06
SEC13-205ENST00000397101 BARHL2Q9NY43 387 aa15.4■□□□□ 0.06
SEC13-205ENST00000397101 CIZ1Q9ULV3 898 aaPredicted RBP15.4■□□□□ 0.06
SEC13-205ENST00000397101 NOC2LQ9Y3T9 749 aaKnown RBP15.4■□□□□ 0.06
SEC13-205ENST00000397101 DNAH14Q0VDD8 3507 aa15.39■□□□□ 0.05
SEC13-205ENST00000397101 COL1A2P08123 1366 aa15.39■□□□□ 0.05
SEC13-205ENST00000397101 IGKV6D-21A0A0A0MT36 114 aa15.39■□□□□ 0.05
SEC13-205ENST00000397101 SMCO2A6NFE2 343 aa15.39■□□□□ 0.05
SEC13-205ENST00000397101 HOXA2O43364 376 aa15.39■□□□□ 0.05
SEC13-205ENST00000397101 HBP1O60381 514 aa15.39■□□□□ 0.05
SEC13-205ENST00000397101 CLCN5P51795 746 aa15.39■□□□□ 0.05
SEC13-205ENST00000397101 ACTR2P61160 394 aa15.39■□□□□ 0.05
SEC13-205ENST00000397101 PLPP4Q5VZY2 271 aa15.39■□□□□ 0.05
SEC13-205ENST00000397101 MCTP2Q6DN12 878 aa15.39■□□□□ 0.05
SEC13-205ENST00000397101 CES5AQ6NT32 575 aa15.39■□□□□ 0.05
SEC13-205ENST00000397101 KIAA0319LQ8IZA0 1049 aa15.39■□□□□ 0.05
SEC13-205ENST00000397101 FBXO18Q8NFZ0 1043 aa15.39■□□□□ 0.05
SEC13-205ENST00000397101 TRAPPC12Q8WVT3 735 aa15.39■□□□□ 0.05
SEC13-205ENST00000397101 TCF25Q9BQ70 676 aa15.39■□□□□ 0.05
SEC13-205ENST00000397101 MXRA8Q9BRK3 442 aa15.39■□□□□ 0.05
SEC13-205ENST00000397101 SDF4Q9BRK5 362 aa15.39■□□□□ 0.05
SEC13-205ENST00000397101 TMEM117Q9H0C3 514 aa15.39■□□□□ 0.05
SEC13-205ENST00000397101 PCDHA6Q9UN73 950 aa15.39■□□□□ 0.05
SEC13-205ENST00000397101 ST3GAL5Q9UNP4 418 aa15.39■□□□□ 0.05
SEC13-205ENST00000397101 PCDHA8Q9Y5H6 950 aa15.39■□□□□ 0.05
SEC13-205ENST00000397101 RIF1Q5UIP0 2472 aaKnown RBP15.38■□□□□ 0.05
SEC13-205ENST00000397101 FAM186AA6NE01 2351 aa15.38■□□□□ 0.05
SEC13-205ENST00000397101 BRD1O95696 1058 aa15.38■□□□□ 0.05
SEC13-205ENST00000397101 KLRC1P26715 233 aa15.38■□□□□ 0.05
SEC13-205ENST00000397101 GNA11P29992 359 aa15.38■□□□□ 0.05
SEC13-205ENST00000397101 KRT2P35908 639 aa15.38■□□□□ 0.05
SEC13-205ENST00000397101 ADCY7P51828 1080 aa15.38■□□□□ 0.05
SEC13-205ENST00000397101 ASTLQ6HA08 431 aaPredicted RBP15.38■□□□□ 0.05
SEC13-205ENST00000397101 PPP1R18Q6NYC8 613 aa15.38■□□□□ 0.05
SEC13-205ENST00000397101 TMEM105Q8N8V8 129 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms