RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 NIFKQ9BYG3 293 aaKnown RBP11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 SEZ6LQ9BYH1 1024 aa11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 SUCLA2Q9P2R7 463 aaPredicted RBP11.25□□□□□ -0.61
THUMPD1-202ENST00000396083 A0A087WZ62 844 aa11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 SMIM35A0A1B0GVV1 85 aa11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 ARHGEF35A5YM69 484 aa11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 FGBP02675 491 aa11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 LONRF3Q496Y0 759 aa11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 FAM102BQ5T8I3 360 aa11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 ARL6IP4Q66PJ3 421 aaKnown RBP11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 MYOCDQ8IZQ8 938 aa11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 PRPF31Q8WWY3 499 aaKnown RBP11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 LRCH3Q96II8 777 aa11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 FAM161BQ96MY7 647 aa11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 NACC1Q96RE7 527 aa11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 CEP89Q96ST8 783 aa11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 FDXACB1Q9BRP7 624 aaPredicted RBP11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 PDCL3Q9H2J4 239 aa11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 IL23AQ9NPF7 189 aa11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 XPNPEP1Q9NQW7 623 aa11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 USP20Q9Y2K6 914 aa11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 MYH15Q9Y2K3 1946 aa11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 SPTBN5Q9NRC6 3674 aaKnown RBP11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 DKC1O60832 514 aaKnown RBP eCLIP11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 GRB10Q13322 594 aa11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 LPIN1Q14693 890 aa11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 PADI6Q6TGC4 694 aa11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 KRI1Q8N9T8 703 aaKnown RBP11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 PNMA5Q96PV4 448 aa11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 POLR3CQ9BUI4 534 aaPredicted RBP11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 CELF4Q9BZC1 486 aaKnown RBP11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 TUFT1Q9NNX1 390 aa11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 SIP14410 1827 aa11.24□□□□□ -0.61
THUMPD1-202ENST00000396083 NPHP3-ACAD11A0A0J9YXS1 232 aa11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 MAGEB2O15479 319 aa11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 MAFO75444 373 aaPredicted RBP11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 PLCG1P19174 1290 aa11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 DNM2P50570 870 aa11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 RABGGTBP53611 331 aa11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 GAS2L3Q86XJ1 694 aa11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 RNF149Q8NC42 400 aa11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 MTRQ99707 1265 aa11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 KIFC3Q9BVG8 833 aa11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 DNM3Q9UQ16 869 aa11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 NOC2LQ9Y3T9 749 aaKnown RBP11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 BMP15O95972 392 aa11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 MYOGP15173 224 aa11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 DDIT3P35638 169 aa11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 NASPP49321 788 aaPredicted RBP11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 DEFB103AP81534 67 aa11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.23□□□□□ -0.612e-6■■□□□ 11.9
THUMPD1-202ENST00000396083 CDR2LQ86X02 465 aaPredicted RBP11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 RPUSD2Q8IZ73 545 aaKnown RBP11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 NEK9Q8TD19 979 aa11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 SPATA32Q96LK8 384 aa11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 RUSC1Q9BVN2 902 aa11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 ZHX3Q9H4I2 956 aa11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 DHX33Q9H6R0 707 aaKnown RBP11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 PADI3Q9ULW8 664 aa11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 PCDHA7Q9UN72 937 aa11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 SRPRBQ9Y5M8 271 aaKnown RBP11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 TRPV2Q9Y5S1 764 aa11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 COL1A2P08123 1366 aa11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 ARID2Q68CP9 1835 aa11.23□□□□□ -0.61
THUMPD1-202ENST00000396083 A0A087X0B3 334 aa11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 SOX1O00570 391 aaPredicted RBP11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 KRT85P78386 507 aa11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 MCM6Q14566 821 aa11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 FBXO47Q5MNV8 452 aa11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 PSPC1Q8WXF1 523 aaKnown RBP11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 CALML4Q96GE6 196 aa11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 ATP6V0A4Q9HBG4 840 aa11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 COL4A3BPQ9Y5P4 624 aa11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 TANC1Q9C0D5 1861 aa11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 LRRIQ4A6NIV6 560 aa11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 GPR32O75388 356 aa11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 RPS6KA5O75582 802 aa11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 LONP1P36776 959 aaKnown RBP11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 PBX2P40425 430 aa11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 GPC3P51654 580 aa11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 ASAP3Q8TDY4 903 aa11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 POLR3FQ9H1D9 316 aaPredicted RBP11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 MINDY3Q9H8M7 445 aa11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 CFAP45Q9UL16 551 aa11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 DGAT1O75907 488 aa11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 MGAT3Q09327 533 aa11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 LAMTOR4Q0VGL1 99 aa11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 PAK2Q13177 524 aa11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 DYMQ7RTS9 669 aa11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 RNF169Q8NCN4 708 aa11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 LEO1Q8WVC0 666 aaPredicted RBP11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 GBP4Q96PP9 640 aa11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 ANKEF1Q9NU02 776 aa11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 ST3GAL5Q9UNP4 418 aa11.22□□□□□ -0.61
THUMPD1-202ENST00000396083 A0A1B0GVL5 298 aa11.21□□□□□ -0.61
THUMPD1-202ENST00000396083 INO80B-WBP1J3KQ70 363 aa11.21□□□□□ -0.61
THUMPD1-202ENST00000396083 EIF4BP23588 611 aaKnown RBP11.21□□□□□ -0.61
THUMPD1-202ENST00000396083 SKOR2Q2VWA4 1001 aaPredicted RBP11.21□□□□□ -0.61
THUMPD1-202ENST00000396083 PSRC1Q6PGN9 363 aaPredicted RBP11.21□□□□□ -0.61
THUMPD1-202ENST00000396083 SHC4Q6S5L8 630 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms