RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 SCG3Q8WXD2 468 aaKnown RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 RUBCNQ92622 972 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 IFT43Q96FT9 208 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 CEP95Q96GE4 821 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 PACSIN2Q9UNF0 486 aaPredicted RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 CDHR2Q9BYE9 1310 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 MAP3K7O43318 606 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 GH2P01242 217 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 MYBL1P10243 752 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 KCNH2Q12809 1159 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 NNTQ13423 1086 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 TFDP2Q14188 446 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 TBCCQ15814 346 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 TTC19Q6DKK2 380 aaPredicted RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 PITPNM3Q9BZ71 974 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 FAF1Q9UNN5 650 aaPredicted RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 ABCB11O95342 1321 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 TMCC1O94876 653 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 CYP2E1P05181 493 aaPredicted RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 RECQLP46063 649 aaPredicted RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 VAMP7P51809 220 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 SLC7A5Q01650 507 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 ZNF568Q3ZCX4 644 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 SPOPLQ6IQ16 392 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 EPM2AIP1Q7L775 607 aaPredicted RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 WNT8AQ9H1J5 351 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 NARFQ9UHQ1 456 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 MED14O60244 1454 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 PVALEFA0A1B0GWK0 134 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 MFAP3LO75121 409 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 COBLO75128 1261 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 HOXD10P28358 340 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 CACNB1Q02641 598 aaPredicted RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 KIF19Q2TAC6 998 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 TBC1D10BQ4KMP7 808 aaPredicted RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 SLC10A5Q5PT55 438 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 EFHBQ8N7U6 833 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 SH3RF3Q8TEJ3 882 aaPredicted RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 TEX12Q9BXU0 123 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 PARD6BQ9BYG5 372 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 ABT1Q9ULW3 272 aaKnown RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 COL15A1P39059 1388 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 DDX5P17844 614 aaKnown RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 ARL4CP56559 192 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 KLHL38Q2WGJ6 581 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 TAB3Q8N5C8 712 aaPredicted RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 ACAP3Q96P50 834 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 PYCARDQ9ULZ3 195 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 KIAA1210Q9ULL0 1709 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 FGGP02679 453 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 P4HBP07237 508 aaKnown RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 GPC3P51654 580 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 EEPD1Q7L9B9 569 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 TRIM55Q9BYV6 548 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 NGRNQ9NPE2 291 aaKnown RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 PARVAQ9NVD7 372 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 RASA4BC9J798 803 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 RASA4O43374 803 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 COPS2P61201 443 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 SLC12A1Q13621 1099 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 IRAK4Q9NWZ3 460 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 IP6K2Q9UHH9 426 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 FARP1Q9Y4F1 1045 aaPredicted RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 CPDO75976 1380 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 GRID2IPA4D2P6 1211 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 ZMYND10O75800 440 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 MMP10P09238 476 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 ZKSCAN8Q15776 578 aaPredicted RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 HP1BP3Q5SSJ5 553 aaPredicted RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 CATSPER4Q7RTX7 472 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 ACRBPQ8NEB7 543 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 DYNLL2Q96FJ2 89 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 CFAP36Q96G28 342 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 POLR3CQ9BUI4 534 aaPredicted RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 DDX56Q9NY93 547 aaKnown RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 SUCLA2Q9P2R7 463 aaPredicted RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 ZNF212Q9UDV6 495 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 UBE4BO95155 1302 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 COPEO14579 308 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 GNA15P30679 374 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 NFX1Q12986 1120 aaKnown RBP5.82□□□□□ -1.48
VPS13C-204ENST00000395898 TMCO4Q5TGY1 634 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 NUGGCQ68CJ6 796 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 TWF2Q6IBS0 349 aaKnown RBP5.82□□□□□ -1.48
VPS13C-204ENST00000395898 MAML1Q92585 1016 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 SUDS3Q9H7L9 328 aaPredicted RBP5.82□□□□□ -1.48
VPS13C-204ENST00000395898 CD209Q9NNX6 404 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 APOBEC2Q9Y235 224 aaKnown RBP5.82□□□□□ -1.48
VPS13C-204ENST00000395898 MROH7-TTC4A0A0A0MT08 1334 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 SPATA31A3Q5VYP0 1347 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 SNX2O60749 519 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 DUOXA2Q1HG44 320 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 TTC8Q8TAM2 541 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 CXorf38Q8TB03 319 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 LY9Q9HBG7 655 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 TULP4Q9NRJ4 1543 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 SFI1A8K8P3 1242 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 SLC26A4O43511 780 aa5.82□□□□□ -1.48
VPS13C-204ENST00000395898 PLEKHA8P1O95397 391 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms