RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 HMGCRP04035 888 aa22.52■■□□□ 1.2
VCPKMT-202ENST00000395860 PRKAR2AP13861 404 aaKnown RBP22.52■■□□□ 1.2
VCPKMT-202ENST00000395860 ZNF18P17022 549 aa22.52■■□□□ 1.2
VCPKMT-202ENST00000395860 RTP1P59025 263 aa22.52■■□□□ 1.2
VCPKMT-202ENST00000395860 ZC2HC1CQ53FD0 456 aaPredicted RBP22.52■■□□□ 1.2
VCPKMT-202ENST00000395860 CSGALNACT2Q8N6G5 542 aa22.52■■□□□ 1.2
VCPKMT-202ENST00000395860 SLC17A8Q8NDX2 589 aa22.52■■□□□ 1.2
VCPKMT-202ENST00000395860 DUSP9Q99956 384 aaKnown RBP22.52■■□□□ 1.2
VCPKMT-202ENST00000395860 ZBTB42B2RXF5 422 aa22.51■■□□□ 1.19
VCPKMT-202ENST00000395860 SMTNP53814 917 aa22.51■■□□□ 1.19
VCPKMT-202ENST00000395860 ALCAMQ13740 583 aa22.51■■□□□ 1.19
VCPKMT-202ENST00000395860 KNOP1Q1ED39 458 aaKnown RBP22.51■■□□□ 1.19
VCPKMT-202ENST00000395860 ZNF484Q5JVG2 852 aa22.51■■□□□ 1.19
VCPKMT-202ENST00000395860 PXYLP1Q8TE99 480 aa22.51■■□□□ 1.19
VCPKMT-202ENST00000395860 TMEM143Q96AN5 459 aa22.51■■□□□ 1.19
VCPKMT-202ENST00000395860 IFT74Q96LB3 600 aa22.51■■□□□ 1.19
VCPKMT-202ENST00000395860 SRRTQ9BXP5 876 aaKnown RBP22.51■■□□□ 1.19
VCPKMT-202ENST00000395860 KCTD10Q9H3F6 313 aa22.51■■□□□ 1.19
VCPKMT-202ENST00000395860 CCDC169A6NNP5 214 aa22.5■■□□□ 1.19
VCPKMT-202ENST00000395860 SERPINC1P01008 464 aa22.5■■□□□ 1.19
VCPKMT-202ENST00000395860 INSRRP14616 1297 aa22.5■■□□□ 1.19
VCPKMT-202ENST00000395860 PRMT2P55345 433 aa22.5■■□□□ 1.19
VCPKMT-202ENST00000395860 FANCCQ00597 558 aa22.5■■□□□ 1.19
VCPKMT-202ENST00000395860 CDKAL1Q5VV42 579 aa22.5■■□□□ 1.19
VCPKMT-202ENST00000395860 FOXR2Q6PJQ5 311 aa22.5■■□□□ 1.19
VCPKMT-202ENST00000395860 NOC3LQ8WTT2 800 aaKnown RBP22.5■■□□□ 1.19
VCPKMT-202ENST00000395860 TRAPPC12Q8WVT3 735 aa22.5■■□□□ 1.19
VCPKMT-202ENST00000395860 BSNDQ8WZ55 320 aa22.5■■□□□ 1.19
VCPKMT-202ENST00000395860 JPH2Q9BR39 696 aaPredicted RBP22.5■■□□□ 1.19
VCPKMT-202ENST00000395860 THAP9Q9H5L6 903 aa22.5■■□□□ 1.19
VCPKMT-202ENST00000395860 KMT5AQ9NQR1 393 aa22.5■■□□□ 1.19
VCPKMT-202ENST00000395860 SLC16A4O15374 487 aa22.5■■□□□ 1.19
VCPKMT-202ENST00000395860 GAS2O43903 313 aaKnown RBP22.5■■□□□ 1.19
VCPKMT-202ENST00000395860 CCND3P30281 292 aaPredicted RBP22.5■■□□□ 1.19
VCPKMT-202ENST00000395860 NPTX2P47972 431 aa22.5■■□□□ 1.19
VCPKMT-202ENST00000395860 NCKAP1LP55160 1127 aa22.5■■□□□ 1.19
VCPKMT-202ENST00000395860 IRX5P78411 483 aaPredicted RBP22.5■■□□□ 1.19
VCPKMT-202ENST00000395860 BEX3Q00994 111 aa22.5■■□□□ 1.19
VCPKMT-202ENST00000395860 FSCN1Q16658 493 aaKnown RBP22.5■■□□□ 1.19
VCPKMT-202ENST00000395860 KCNG1Q9UIX4 513 aa22.5■■□□□ 1.19
VCPKMT-202ENST00000395860 EVPLQ92817 2033 aa22.5■■□□□ 1.19
VCPKMT-202ENST00000395860 COL1A2P08123 1366 aa22.49■■□□□ 1.19
VCPKMT-202ENST00000395860 PPP1R37O75864 691 aa22.49■■□□□ 1.19
VCPKMT-202ENST00000395860 MYL3P08590 195 aa22.49■■□□□ 1.19
VCPKMT-202ENST00000395860 C6orf222P0C671 652 aaPredicted RBP22.49■■□□□ 1.19
VCPKMT-202ENST00000395860 RARBP10826 455 aa22.49■■□□□ 1.19
VCPKMT-202ENST00000395860 HOXD13P35453 343 aa22.49■■□□□ 1.19
VCPKMT-202ENST00000395860 IGBP1P78318 339 aa22.49■■□□□ 1.19
VCPKMT-202ENST00000395860 KCNA1Q09470 495 aa22.49■■□□□ 1.19
VCPKMT-202ENST00000395860 CCDC173Q0VFZ6 552 aa22.49■■□□□ 1.19
VCPKMT-202ENST00000395860 ZCWPW2Q504Y3 356 aa22.49■■□□□ 1.19
VCPKMT-202ENST00000395860 PPP4R3CPQ6ZMV5 832 aa22.49■■□□□ 1.19
VCPKMT-202ENST00000395860 HAUS6Q7Z4H7 955 aa22.49■■□□□ 1.19
VCPKMT-202ENST00000395860 SPIRE2Q8WWL2 714 aa22.49■■□□□ 1.19
VCPKMT-202ENST00000395860 TCP11Q8WWU5 503 aa22.49■■□□□ 1.19
VCPKMT-202ENST00000395860 STRA6Q9BX79 667 aa22.49■■□□□ 1.19
VCPKMT-202ENST00000395860 ST6GALNAC4Q9H4F1 302 aa22.49■■□□□ 1.19
VCPKMT-202ENST00000395860 SUGCTQ9HAC7 445 aa22.49■■□□□ 1.19
VCPKMT-202ENST00000395860 SPC25Q9HBM1 224 aa22.49■■□□□ 1.19
VCPKMT-202ENST00000395860 FGFR1OPO95684 399 aaKnown RBP22.48■■□□□ 1.19
VCPKMT-202ENST00000395860 F2P00734 622 aa22.48■■□□□ 1.19
VCPKMT-202ENST00000395860 ARL2P36404 184 aa22.48■■□□□ 1.19
VCPKMT-202ENST00000395860 GJA9P57773 515 aa22.48■■□□□ 1.19
VCPKMT-202ENST00000395860 PPP2R5AQ15172 486 aa22.48■■□□□ 1.19
VCPKMT-202ENST00000395860 CREBRFQ8IUR6 639 aa22.48■■□□□ 1.19
VCPKMT-202ENST00000395860 KSR1Q8IVT5 923 aa22.48■■□□□ 1.19
VCPKMT-202ENST00000395860 TYW1Q9NV66 732 aaKnown RBP22.48■■□□□ 1.19
VCPKMT-202ENST00000395860 TRIM17Q9Y577 477 aa22.48■■□□□ 1.19
VCPKMT-202ENST00000395860 IGKV6-21A0A0C4DH24 114 aa22.48■■□□□ 1.19
VCPKMT-202ENST00000395860 PDXKO00764 312 aa22.48■■□□□ 1.19
VCPKMT-202ENST00000395860 CALUO43852 315 aaPredicted RBP22.48■■□□□ 1.19
VCPKMT-202ENST00000395860 ZNF75DP51815 510 aa22.48■■□□□ 1.19
VCPKMT-202ENST00000395860 SPAG1Q07617 926 aa22.48■■□□□ 1.19
VCPKMT-202ENST00000395860 IER5Q5VY09 327 aa22.48■■□□□ 1.19
VCPKMT-202ENST00000395860 SLAIN1Q8ND83 568 aa22.48■■□□□ 1.19
VCPKMT-202ENST00000395860 NTPCRQ9BSD7 190 aaKnown RBP22.48■■□□□ 1.19
VCPKMT-202ENST00000395860 IFNKQ9P0W0 207 aa22.48■■□□□ 1.19
VCPKMT-202ENST00000395860 MAGEC2Q9UBF1 373 aaPredicted RBP22.48■■□□□ 1.19
VCPKMT-202ENST00000395860 KCNJ18B7U540 433 aa22.47■■□□□ 1.19
VCPKMT-202ENST00000395860 GLRA2P23416 452 aa22.47■■□□□ 1.19
VCPKMT-202ENST00000395860 CHMP4BP1P59074 171 aa22.47■■□□□ 1.19
VCPKMT-202ENST00000395860 GTF2BQ00403 316 aa22.47■■□□□ 1.19
VCPKMT-202ENST00000395860 FKBP3Q00688 224 aaKnown RBP22.47■■□□□ 1.19
VCPKMT-202ENST00000395860 PPFIA1Q13136 1202 aa22.47■■□□□ 1.19
VCPKMT-202ENST00000395860 KCNJ12Q14500 433 aa22.47■■□□□ 1.19
VCPKMT-202ENST00000395860 KIAA0753Q2KHM9 967 aa22.47■■□□□ 1.19
VCPKMT-202ENST00000395860 EDRF1Q3B7T1 1238 aa22.47■■□□□ 1.19
VCPKMT-202ENST00000395860 MAP3K21Q5TCX8 1036 aa22.47■■□□□ 1.19
VCPKMT-202ENST00000395860 FAM114A1Q8IWE2 563 aa22.47■■□□□ 1.19
VCPKMT-202ENST00000395860 SYCP3Q8IZU3 236 aa22.47■■□□□ 1.19
VCPKMT-202ENST00000395860 LRRC71Q8N4P6 559 aa22.47■■□□□ 1.19
VCPKMT-202ENST00000395860 RETREG2Q8NC44 543 aa22.47■■□□□ 1.19
VCPKMT-202ENST00000395860 ANKRD20A12PQ8NF67 263 aa22.47■■□□□ 1.19
VCPKMT-202ENST00000395860 ASAP3Q8TDY4 903 aa22.47■■□□□ 1.19
VCPKMT-202ENST00000395860 KIFC3Q9BVG8 833 aa22.47■■□□□ 1.19
VCPKMT-202ENST00000395860 TRAF3IP3Q9Y228 551 aa22.47■■□□□ 1.19
VCPKMT-202ENST00000395860 ZMYM2Q9UBW7 1377 aa22.47■■□□□ 1.19
VCPKMT-202ENST00000395860 C22orf31O95567 290 aa22.46■■□□□ 1.19
VCPKMT-202ENST00000395860 UBASH3AP57075 661 aa22.46■■□□□ 1.19
VCPKMT-202ENST00000395860 MFSD10Q14728 455 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms