RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 NOC2LQ9Y3T9 749 aaKnown RBP22.17■■□□□ 1.14
SNCA-203ENST00000394986 MYH15Q9Y2K3 1946 aa22.17■■□□□ 1.14
SNCA-203ENST00000394986 YEATS4O95619 227 aa22.16■■□□□ 1.14
SNCA-203ENST00000394986 CRYBB1P53674 252 aaPredicted RBP22.16■■□□□ 1.14
SNCA-203ENST00000394986 TMEM119Q4V9L6 283 aa22.16■■□□□ 1.14
SNCA-203ENST00000394986 PADI6Q6TGC4 694 aa22.16■■□□□ 1.14
SNCA-203ENST00000394986 EXOC8Q8IYI6 725 aa22.16■■□□□ 1.14
SNCA-203ENST00000394986 KRI1Q8N9T8 703 aaKnown RBP22.16■■□□□ 1.14
SNCA-203ENST00000394986 PRPF31Q8WWY3 499 aaKnown RBP22.16■■□□□ 1.14
SNCA-203ENST00000394986 CDK5RAP3Q96JB5 506 aa22.16■■□□□ 1.14
SNCA-203ENST00000394986 NLRP4Q96MN2 994 aa22.16■■□□□ 1.14
SNCA-203ENST00000394986 GPRC5CQ9NQ84 441 aa22.16■■□□□ 1.14
SNCA-203ENST00000394986 PADI3Q9ULW8 664 aa22.16■■□□□ 1.14
SNCA-203ENST00000394986 DNM3Q9UQ16 869 aa22.16■■□□□ 1.14
SNCA-203ENST00000394986 MORC2Q9Y6X9 1032 aaPredicted RBP22.16■■□□□ 1.14
SNCA-203ENST00000394986 EVPLQ92817 2033 aa22.16■■□□□ 1.14
SNCA-203ENST00000394986 A0A087WZ62 844 aa22.15■■□□□ 1.14
SNCA-203ENST00000394986 GRXCR1A8MXD5 290 aa22.15■■□□□ 1.14
SNCA-203ENST00000394986 CSDE1O75534 798 aaKnown RBP22.15■■□□□ 1.14
SNCA-203ENST00000394986 EYA4O95677 639 aa22.15■■□□□ 1.14
SNCA-203ENST00000394986 WDR5P61964 334 aaKnown RBP22.15■■□□□ 1.14
SNCA-203ENST00000394986 PAK2Q13177 524 aa22.15■■□□□ 1.14
SNCA-203ENST00000394986 TMCO2Q7Z6W1 182 aaPredicted RBP22.15■■□□□ 1.14
SNCA-203ENST00000394986 ASAP3Q8TDY4 903 aa22.15■■□□□ 1.14
SNCA-203ENST00000394986 PSPC1Q8WXF1 523 aaKnown RBP22.15■■□□□ 1.14
SNCA-203ENST00000394986 SYMPKQ92797 1274 aaKnown RBP22.15■■□□□ 1.14
SNCA-203ENST00000394986 FDXACB1Q9BRP7 624 aaPredicted RBP22.15■■□□□ 1.14
SNCA-203ENST00000394986 MTIF3Q9H2K0 278 aaKnown RBP22.15■■□□□ 1.14
SNCA-203ENST00000394986 POLD4Q9HCU8 107 aa22.15■■□□□ 1.14
SNCA-203ENST00000394986 COL4A3BPQ9Y5P4 624 aa22.15■■□□□ 1.14
SNCA-203ENST00000394986 SLC4A7Q9Y6M7 1214 aa22.15■■□□□ 1.14
SNCA-203ENST00000394986 GAS2O43903 313 aaKnown RBP22.14■■□□□ 1.14
SNCA-203ENST00000394986 RPS6KA5O75582 802 aa22.14■■□□□ 1.14
SNCA-203ENST00000394986 BAIAP3O94812 1187 aa22.14■■□□□ 1.14
SNCA-203ENST00000394986 FGFR4P22455 802 aa22.14■■□□□ 1.14
SNCA-203ENST00000394986 DEFB103AP81534 67 aa22.14■■□□□ 1.14
SNCA-203ENST00000394986 LAMTOR4Q0VGL1 99 aa22.14■■□□□ 1.14
SNCA-203ENST00000394986 IKBKEQ14164 716 aa22.14■■□□□ 1.14
SNCA-203ENST00000394986 LRIT3Q3SXY7 679 aa22.14■■□□□ 1.14
SNCA-203ENST00000394986 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.14■■□□□ 1.14
SNCA-203ENST00000394986 FAM228AQ86W67 206 aa22.14■■□□□ 1.14
SNCA-203ENST00000394986 RASSF8Q8NHQ8 419 aa22.14■■□□□ 1.14
SNCA-203ENST00000394986 TCP11Q8WWU5 503 aa22.14■■□□□ 1.14
SNCA-203ENST00000394986 POLR3FQ9H1D9 316 aaPredicted RBP22.14■■□□□ 1.14
SNCA-203ENST00000394986 PLCG1P19174 1290 aa22.14■■□□□ 1.13
SNCA-203ENST00000394986 NCLP19338 710 aaKnown RBP22.14■■□□□ 1.13
SNCA-203ENST00000394986 NFX1Q12986 1120 aaKnown RBP22.14■■□□□ 1.13
SNCA-203ENST00000394986 USP38Q8NB14 1042 aa22.14■■□□□ 1.13
SNCA-203ENST00000394986 CALML4Q96GE6 196 aa22.14■■□□□ 1.13
SNCA-203ENST00000394986 LRCH3Q96II8 777 aa22.14■■□□□ 1.13
SNCA-203ENST00000394986 NT5C3AQ9H0P0 336 aa22.14■■□□□ 1.13
SNCA-203ENST00000394986 ERVK-5Q9HDB9 667 aa22.14■■□□□ 1.13
SNCA-203ENST00000394986 SQORQ9Y6N5 450 aa22.14■■□□□ 1.13
SNCA-203ENST00000394986 ABHD14A-ACY1A0A1B0GW23 586 aa22.13■■□□□ 1.13
SNCA-203ENST00000394986 PPP6R2O75170 966 aa22.13■■□□□ 1.13
SNCA-203ENST00000394986 SSBP05455 408 aaKnown RBP eCLIP22.13■■□□□ 1.13
SNCA-203ENST00000394986 SRGAP2CP0DJJ0 459 aa22.13■■□□□ 1.13
SNCA-203ENST00000394986 DARSP14868 501 aaKnown RBP22.13■■□□□ 1.13
SNCA-203ENST00000394986 CYP11B2P19099 503 aa22.13■■□□□ 1.13
SNCA-203ENST00000394986 ARL2P36404 184 aa22.13■■□□□ 1.13
SNCA-203ENST00000394986 KCNJ6P48051 423 aa22.13■■□□□ 1.13
SNCA-203ENST00000394986 FAM102BQ5T8I3 360 aa22.13■■□□□ 1.13
SNCA-203ENST00000394986 ATL3Q6DD88 541 aa22.13■■□□□ 1.13
SNCA-203ENST00000394986 LINC01599Q8WXQ3 324 aa22.13■■□□□ 1.13
SNCA-203ENST00000394986 APBB2Q92870 758 aa22.13■■□□□ 1.13
SNCA-203ENST00000394986 RUSC1Q9BVN2 902 aa22.13■■□□□ 1.13
SNCA-203ENST00000394986 CCSER1Q9C0I3 900 aa22.13■■□□□ 1.13
SNCA-203ENST00000394986 TMX1Q9H3N1 280 aa22.13■■□□□ 1.13
SNCA-203ENST00000394986 ST3GAL5Q9UNP4 418 aa22.13■■□□□ 1.13
SNCA-203ENST00000394986 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.12■■□□□ 1.13
SNCA-203ENST00000394986 ATP2A2P16615 1042 aaKnown RBP22.12■■□□□ 1.13
SNCA-203ENST00000394986 GLRA2P23416 452 aa22.12■■□□□ 1.13
SNCA-203ENST00000394986 EIF4BP23588 611 aaKnown RBP22.12■■□□□ 1.13
SNCA-203ENST00000394986 ZNF410Q86VK4 478 aa22.12■■□□□ 1.13
SNCA-203ENST00000394986 RNF149Q8NC42 400 aa22.12■■□□□ 1.13
SNCA-203ENST00000394986 MCPH1Q8NEM0 835 aa22.12■■□□□ 1.13
SNCA-203ENST00000394986 KCNG4Q8TDN1 519 aa22.12■■□□□ 1.13
SNCA-203ENST00000394986 GCOM2Q9BZD3 368 aaPredicted RBP22.12■■□□□ 1.13
SNCA-203ENST00000394986 IFT122Q9HBG6 1241 aa22.12■■□□□ 1.13
SNCA-203ENST00000394986 CFAP45Q9UL16 551 aa22.12■■□□□ 1.13
SNCA-203ENST00000394986 MGEA5O60502 916 aa22.11■■□□□ 1.13
SNCA-203ENST00000394986 PLA2G4BP0C869 781 aa22.11■■□□□ 1.13
SNCA-203ENST00000394986 RABGGTBP53611 331 aa22.11■■□□□ 1.13
SNCA-203ENST00000394986 NUCB2P80303 420 aa22.11■■□□□ 1.13
SNCA-203ENST00000394986 CAPSQ13938 189 aa22.11■■□□□ 1.13
SNCA-203ENST00000394986 BLOC1S4Q9NUP1 217 aa22.11■■□□□ 1.13
SNCA-203ENST00000394986 SLC26A4O43511 780 aa22.1■■□□□ 1.13
SNCA-203ENST00000394986 PBX2P40425 430 aa22.1■■□□□ 1.13
SNCA-203ENST00000394986 SLC12A3P55017 1021 aa22.1■■□□□ 1.13
SNCA-203ENST00000394986 KRT85P78386 507 aa22.1■■□□□ 1.13
SNCA-203ENST00000394986 RAD51AP2Q09MP3 1159 aa22.1■■□□□ 1.13
SNCA-203ENST00000394986 DHX8Q14562 1220 aaKnown RBP22.1■■□□□ 1.13
SNCA-203ENST00000394986 AXDND1Q5T1B0 1012 aaPredicted RBP22.1■■□□□ 1.13
SNCA-203ENST00000394986 RINT1Q6NUQ1 792 aa22.1■■□□□ 1.13
SNCA-203ENST00000394986 FAM117BQ6P1L5 589 aa22.1■■□□□ 1.13
SNCA-203ENST00000394986 RTN4RL1Q86UN2 441 aaPredicted RBP22.1■■□□□ 1.13
SNCA-203ENST00000394986 MYOCDQ8IZQ8 938 aa22.1■■□□□ 1.13
SNCA-203ENST00000394986 ZNF710Q8N1W2 664 aa22.1■■□□□ 1.13
SNCA-203ENST00000394986 BSNDQ8WZ55 320 aa22.1■■□□□ 1.13
SNCA-203ENST00000394986 PANK2Q9BZ23 570 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms