RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 GRID2IPA4D2P6 1211 aa16.73■□□□□ 0.27
UBE2D3-207ENST00000394801 VCAM1P19320 739 aa16.73■□□□□ 0.27
UBE2D3-207ENST00000394801 STAT1P42224 750 aa16.73■□□□□ 0.27
UBE2D3-207ENST00000394801 SF3B2Q13435 895 aaKnown RBP16.73■□□□□ 0.27
UBE2D3-207ENST00000394801 GLE1Q53GS7 698 aaKnown RBP16.73■□□□□ 0.27
UBE2D3-207ENST00000394801 VPS36Q86VN1 386 aa16.73■□□□□ 0.27
UBE2D3-207ENST00000394801 PSMB7Q99436 277 aa16.73■□□□□ 0.27
UBE2D3-207ENST00000394801 TMEM206Q9H813 350 aa16.73■□□□□ 0.27
UBE2D3-207ENST00000394801 TMEM51Q9NW97 253 aa16.73■□□□□ 0.27
UBE2D3-207ENST00000394801 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.73■□□□□ 0.27
UBE2D3-207ENST00000394801 NFKBIEO00221 500 aa16.72■□□□□ 0.27
UBE2D3-207ENST00000394801 CES2O00748 559 aa16.72■□□□□ 0.27
UBE2D3-207ENST00000394801 AARSP49588 968 aaKnown RBP eCLIP16.72■□□□□ 0.27
UBE2D3-207ENST00000394801 PGM5Q15124 567 aa16.72■□□□□ 0.27
UBE2D3-207ENST00000394801 IFI16Q16666 785 aaKnown RBP16.72■□□□□ 0.27
UBE2D3-207ENST00000394801 C12orf56Q8IXR9 622 aa16.72■□□□□ 0.27
UBE2D3-207ENST00000394801 ST6GALNAC4Q9H4F1 302 aa16.72■□□□□ 0.27
UBE2D3-207ENST00000394801 MED4Q9NPJ6 270 aa16.72■□□□□ 0.27
UBE2D3-207ENST00000394801 MYBL2P10244 700 aa16.72■□□□□ 0.27
UBE2D3-207ENST00000394801 CYP2J2P51589 502 aa16.72■□□□□ 0.27
UBE2D3-207ENST00000394801 BFSP1Q12934 665 aa16.72■□□□□ 0.27
UBE2D3-207ENST00000394801 CBWD6Q4V339 395 aa16.72■□□□□ 0.27
UBE2D3-207ENST00000394801 CBWD3Q5JTY5 395 aa16.72■□□□□ 0.27
UBE2D3-207ENST00000394801 CBWD5Q5RIA9 395 aa16.72■□□□□ 0.27
UBE2D3-207ENST00000394801 GJB7Q6PEY0 223 aa16.72■□□□□ 0.27
UBE2D3-207ENST00000394801 C4orf19Q8IY42 314 aa16.72■□□□□ 0.27
UBE2D3-207ENST00000394801 TIPINQ9BVW5 301 aa16.72■□□□□ 0.27
UBE2D3-207ENST00000394801 PKD2L1Q9P0L9 805 aa16.72■□□□□ 0.27
UBE2D3-207ENST00000394801 DMGDHQ9UI17 866 aaKnown RBP16.72■□□□□ 0.27
UBE2D3-207ENST00000394801 A0A0A6YYK5 440 aaPredicted RBP16.71■□□□□ 0.27
UBE2D3-207ENST00000394801 ZBED4O75132 1171 aa16.71■□□□□ 0.27
UBE2D3-207ENST00000394801 ZMYND10O75800 440 aa16.71■□□□□ 0.27
UBE2D3-207ENST00000394801 PLS3P13797 630 aa16.71■□□□□ 0.27
UBE2D3-207ENST00000394801 SOX5P35711 763 aa16.71■□□□□ 0.27
UBE2D3-207ENST00000394801 SPP2Q13103 211 aa16.71■□□□□ 0.27
UBE2D3-207ENST00000394801 DGKZQ13574 1117 aa16.71■□□□□ 0.27
UBE2D3-207ENST00000394801 FMNL3Q8IVF7 1028 aa16.71■□□□□ 0.27
UBE2D3-207ENST00000394801 SYCP3Q8IZU3 236 aa16.71■□□□□ 0.27
UBE2D3-207ENST00000394801 SLC30A5Q8TAD4 765 aa16.71■□□□□ 0.27
UBE2D3-207ENST00000394801 AENQ8WTP8 325 aaKnown RBP16.71■□□□□ 0.27
UBE2D3-207ENST00000394801 HDAC7Q8WUI4 952 aa16.71■□□□□ 0.27
UBE2D3-207ENST00000394801 PDCD2LQ9BRP1 358 aa16.71■□□□□ 0.27
UBE2D3-207ENST00000394801 PSD3Q9NYI0 1048 aa16.71■□□□□ 0.27
UBE2D3-207ENST00000394801 EHD2Q9NZN4 543 aa16.71■□□□□ 0.27
UBE2D3-207ENST00000394801 ADAM21Q9UKJ8 722 aa16.71■□□□□ 0.27
UBE2D3-207ENST00000394801 F8VZ95 297 aa16.71■□□□□ 0.26
UBE2D3-207ENST00000394801 DDX3XO00571 662 aaKnown RBP eCLIP16.71■□□□□ 0.262e-17■■■■□ 23.8
UBE2D3-207ENST00000394801 EXOC3O60645 756 aa16.71■□□□□ 0.26
UBE2D3-207ENST00000394801 FTCDO95954 541 aa16.71■□□□□ 0.26
UBE2D3-207ENST00000394801 MTMR2Q13614 643 aa16.71■□□□□ 0.26
UBE2D3-207ENST00000394801 LRRC57Q8N9N7 239 aa16.71■□□□□ 0.26
UBE2D3-207ENST00000394801 OLIG1Q8TAK6 271 aa16.71■□□□□ 0.26
UBE2D3-207ENST00000394801 FAM71BQ8TC56 605 aa16.71■□□□□ 0.26
UBE2D3-207ENST00000394801 EXOC4Q96A65 974 aa16.71■□□□□ 0.26
UBE2D3-207ENST00000394801 INPP4AQ96PE3 977 aaPredicted RBP16.71■□□□□ 0.26
UBE2D3-207ENST00000394801 SYT11Q9BT88 431 aa16.71■□□□□ 0.26
UBE2D3-207ENST00000394801 ZC3H4Q9UPT8 1303 aaKnown RBP16.71■□□□□ 0.26
UBE2D3-207ENST00000394801 ERICH4A6NGS2 130 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 K7ENM7 598 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 EVI5O60447 810 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 ASTN2O75129 1339 aaPredicted RBP16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 EIF2AK2P19525 551 aaKnown RBP16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 TNFRSF8P28908 595 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 MCCD1P59942 119 aaPredicted RBP16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 SNRPFP62306 86 aaKnown RBP16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 GTF2BQ00403 316 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 XRRA1Q6P2D8 792 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 MS4A14Q96JA4 679 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 TRERF1Q96PN7 1200 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 RMDN3Q96TC7 470 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 RPAP3Q9H6T3 665 aaPredicted RBP16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 PXMP2Q9NR77 195 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 HOMER2Q9NSB8 354 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 RBM12Q9NTZ6 932 aaKnown RBP16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 SMARCAL1Q9NZC9 954 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 APEX2Q9UBZ4 518 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 DNAJC12Q9UKB3 198 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 HPCAL4Q9UM19 191 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 SAMM50Q9Y512 469 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 BRCA1P38398 1863 aaKnown RBP16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 VWA5AO00534 786 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 N4BP1O75113 896 aaKnown RBP16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 H2AFZP0C0S5 128 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 RFX1P22670 979 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 YWHABP31946 246 aaKnown RBP16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 SFNP31947 248 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 RNF207Q6ZRF8 634 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 H2AFVQ71UI9 128 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 INTS8Q75QN2 995 aaKnown RBP16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 LMO3Q8TAP4 145 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 ACCSQ96QU6 501 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 SELENOOQ9BVL4 669 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 GPR88Q9GZN0 384 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 STIM2Q9P246 746 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 ZNF112Q9UJU3 913 aa16.7■□□□□ 0.26
UBE2D3-207ENST00000394801 TULP2O00295 520 aa16.69■□□□□ 0.26
UBE2D3-207ENST00000394801 MAPK13O15264 365 aa16.69■□□□□ 0.26
UBE2D3-207ENST00000394801 ATP9AO75110 1047 aa16.69■□□□□ 0.26
UBE2D3-207ENST00000394801 TRIM49P0CI25 452 aa16.69■□□□□ 0.26
UBE2D3-207ENST00000394801 TRIM49CP0CI26 452 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms