RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 VTI1AQ96AJ9 217 aa6.15□□□□□ -1.43
RFFL-202ENST00000394597 CNOT6LQ96LI5 555 aaKnown RBP6.15□□□□□ -1.43
RFFL-202ENST00000394597 THAP9Q9H5L6 903 aa6.15□□□□□ -1.43
RFFL-202ENST00000394597 ANKZF1Q9H8Y5 726 aa6.15□□□□□ -1.43
RFFL-202ENST00000394597 HOMER3Q9NSC5 361 aa6.15□□□□□ -1.43
RFFL-202ENST00000394597 TUBE1Q9UJT0 475 aa6.15□□□□□ -1.43
RFFL-202ENST00000394597 GDAQ9Y2T3 454 aa6.15□□□□□ -1.43
RFFL-202ENST00000394597 PPP2R3BQ9Y5P8 575 aa6.15□□□□□ -1.43
RFFL-202ENST00000394597 IPO5O00410 1097 aaKnown RBP6.14□□□□□ -1.43
RFFL-202ENST00000394597 PPFIA2O75334 1257 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 CETN2P41208 172 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 MAGEA1P43355 309 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 CTCFP49711 727 aaPredicted RBP6.14□□□□□ -1.43
RFFL-202ENST00000394597 CYP2J2P51589 502 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 JAK3P52333 1124 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 GRIN1Q05586 938 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 TMED1Q13445 227 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 PLCB4Q15147 1175 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 TKFCQ3LXA3 575 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 ARMCX6Q7L4S7 300 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 ILDR1Q86SU0 546 aaPredicted RBP6.14□□□□□ -1.43
RFFL-202ENST00000394597 GPC2Q8N158 579 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 RDH13Q8NBN7 331 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 NEK9Q8TD19 979 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 MGARPQ8TDB4 240 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 P3H4Q92791 437 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 KAT2BQ92831 832 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 IFIH1Q9BYX4 1025 aaKnown RBP6.14□□□□□ -1.43
RFFL-202ENST00000394597 ELP3Q9H9T3 547 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 PARVGQ9HBI0 331 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 FAM53CQ9NYF3 392 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 HDAC6Q9UBN7 1215 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 TRPC6Q9Y210 931 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 POTEB3A0JP26 581 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 POTECB2RU33 542 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 SLC26A4O43511 780 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 CYTH3O43739 400 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 POLGP54098 1239 aaPredicted RBP6.14□□□□□ -1.43
RFFL-202ENST00000394597 DMP1Q13316 513 aaPredicted RBP6.14□□□□□ -1.43
RFFL-202ENST00000394597 SLC9C1Q4G0N8 1177 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 WDR44Q5JSH3 913 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 THEMIS2Q5TEJ8 643 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 POTEBQ6S5H4 581 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 GPIHBP1Q8IV16 184 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.14□□□□□ -1.43
RFFL-202ENST00000394597 TEKT4Q8WW24 435 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 DTNBP1Q96EV8 351 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 EEF2KMTQ96G04 330 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 CEP170P1Q96L14 293 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 FGD4Q96M96 766 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 NOX5Q96PH1 765 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 TEX13BQ9BXU2 312 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 MCM8Q9UJA3 840 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 NFU1Q9UMS0 254 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 SYNPO2Q9UMS6 1093 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 NOVA2Q9UNW9 492 aaKnown RBP6.14□□□□□ -1.43
RFFL-202ENST00000394597 ADAMTS7Q9UKP4 1686 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 SIPA1L3O60292 1781 aaPredicted RBP6.14□□□□□ -1.43
RFFL-202ENST00000394597 RGS16O15492 202 aaPredicted RBP6.14□□□□□ -1.43
RFFL-202ENST00000394597 FSBPO95073 299 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 ANP32DO95626 131 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 HNRNPCP07910 306 aaKnown RBP eCLIP6.14□□□□□ -1.43
RFFL-202ENST00000394597 MYBL1P10243 752 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 HARSP12081 509 aaKnown RBP6.14□□□□□ -1.43
RFFL-202ENST00000394597 PECAM1P16284 738 aaPredicted RBP6.14□□□□□ -1.43
RFFL-202ENST00000394597 FERP16591 822 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 CXCR5P32302 372 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 PRCPP42785 496 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 FXR2P51116 673 aaKnown RBP eCLIP6.14□□□□□ -1.43
RFFL-202ENST00000394597 KRT76Q01546 638 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 LRRC63Q05C16 580 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 MKRN3Q13064 507 aaKnown RBP6.14□□□□□ -1.43
RFFL-202ENST00000394597 BIRC3Q13489 604 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 EPHA7Q15375 998 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 APBB1IPQ7Z5R6 666 aaPredicted RBP6.14□□□□□ -1.43
RFFL-202ENST00000394597 CCDC25Q86WR0 208 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 CCDC26Q8TAB7 109 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 PIGOQ8TEQ8 1089 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 DYDC2Q96IM9 177 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 FAM207AQ9NSI2 230 aaPredicted RBP6.14□□□□□ -1.43
RFFL-202ENST00000394597 INTS9Q9NV88 658 aaKnown RBP6.14□□□□□ -1.43
RFFL-202ENST00000394597 FBXO28Q9NVF7 368 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 KLHL14Q9P2G3 628 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 SEPT9Q9UHD8 586 aaPredicted RBP6.14□□□□□ -1.43
RFFL-202ENST00000394597 HPSEQ9Y251 543 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 YDJCA8MPS7 323 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 WDR64B1ANS9 1081 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 ACTN4O43707 911 aaKnown RBP6.14□□□□□ -1.43
RFFL-202ENST00000394597 TBC1D12O60347 775 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 OPHN1O60890 802 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 DDNO94850 711 aaPredicted RBP6.14□□□□□ -1.43
RFFL-202ENST00000394597 SUN1O94901 812 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 P4HBP07237 508 aaKnown RBP6.14□□□□□ -1.43
RFFL-202ENST00000394597 SKIP12755 728 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 NR2F2P24468 414 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 TPP2P29144 1249 aaPredicted RBP6.14□□□□□ -1.43
RFFL-202ENST00000394597 COPB2P35606 906 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 MDH1P40925 334 aaKnown RBP6.14□□□□□ -1.43
RFFL-202ENST00000394597 PSMC4P43686 418 aa6.14□□□□□ -1.43
RFFL-202ENST00000394597 ZNF131P52739 623 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms