RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 ATAD3AQ9NVI7 634 aa14.24□□□□□ -0.13
USP49-203ENST00000394253 CDC40O60508 579 aaKnown RBP eCLIP14.24□□□□□ -0.13
USP49-203ENST00000394253 TSC22D2O75157 780 aa14.24□□□□□ -0.13
USP49-203ENST00000394253 S100A1P23297 94 aa14.24□□□□□ -0.13
USP49-203ENST00000394253 SLC10A5Q5PT55 438 aa14.24□□□□□ -0.13
USP49-203ENST00000394253 SCFD1Q8WVM8 642 aa14.24□□□□□ -0.13
USP49-203ENST00000394253 GUCY1B2O75343 617 aa14.24□□□□□ -0.13
USP49-203ENST00000394253 GAP43P17677 238 aa14.24□□□□□ -0.13
USP49-203ENST00000394253 PHKA1P46020 1223 aa14.24□□□□□ -0.13
USP49-203ENST00000394253 MAGOHP61326 146 aaKnown RBP14.24□□□□□ -0.13
USP49-203ENST00000394253 WLSQ5T9L3 541 aa14.24□□□□□ -0.13
USP49-203ENST00000394253 TPTE2Q6XPS3 522 aa14.24□□□□□ -0.13
USP49-203ENST00000394253 GPR141Q7Z602 305 aa14.24□□□□□ -0.13
USP49-203ENST00000394253 RNF139Q8WU17 664 aa14.24□□□□□ -0.13
USP49-203ENST00000394253 FAF2Q96CS3 445 aa14.24□□□□□ -0.13
USP49-203ENST00000394253 AK8Q96MA6 479 aa14.24□□□□□ -0.13
USP49-203ENST00000394253 ARFIP2P53365 341 aa14.24□□□□□ -0.13
USP49-203ENST00000394253 SHROOM1Q2M3G4 852 aaPredicted RBP14.24□□□□□ -0.13
USP49-203ENST00000394253 ANKRD49Q8WVL7 239 aa14.24□□□□□ -0.13
USP49-203ENST00000394253 CYTH3O43739 400 aa14.24□□□□□ -0.13
USP49-203ENST00000394253 ACTN3Q08043 901 aaPredicted RBP14.24□□□□□ -0.13
USP49-203ENST00000394253 STAMQ92783 540 aa14.24□□□□□ -0.13
USP49-203ENST00000394253 RNPEPQ9H4A4 650 aa14.24□□□□□ -0.13
USP49-203ENST00000394253 PDE9AO76083 593 aa14.23□□□□□ -0.13
USP49-203ENST00000394253 MFN1Q8IWA4 741 aa14.23□□□□□ -0.13
USP49-203ENST00000394253 TBC1D19Q8N5T2 526 aa14.23□□□□□ -0.13
USP49-203ENST00000394253 APPL2Q8NEU8 664 aa14.23□□□□□ -0.13
USP49-203ENST00000394253 ALKBH8Q96BT7 664 aaKnown RBP14.23□□□□□ -0.13
USP49-203ENST00000394253 RBM41Q96IZ5 413 aaKnown RBP14.23□□□□□ -0.13
USP49-203ENST00000394253 ANKRD27Q96NW4 1050 aa14.23□□□□□ -0.13
USP49-203ENST00000394253 KRT84Q9NSB2 600 aa14.23□□□□□ -0.13
USP49-203ENST00000394253 FAM25AB3EWG3 89 aa14.23□□□□□ -0.13
USP49-203ENST00000394253 FAM25CB3EWG5 89 aa14.23□□□□□ -0.13
USP49-203ENST00000394253 FAM25GB3EWG6 89 aa14.23□□□□□ -0.13
USP49-203ENST00000394253 NR2F2P24468 414 aa14.23□□□□□ -0.13
USP49-203ENST00000394253 STXBP2Q15833 593 aa14.23□□□□□ -0.13
USP49-203ENST00000394253 ATP8A2Q9NTI2 1148 aa14.23□□□□□ -0.13
USP49-203ENST00000394253 ANXA13P27216 316 aa14.23□□□□□ -0.13
USP49-203ENST00000394253 MRPS25P82663 173 aaKnown RBP14.23□□□□□ -0.13
USP49-203ENST00000394253 SMARCAL1Q9NZC9 954 aa14.23□□□□□ -0.13
USP49-203ENST00000394253 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.23□□□□□ -0.13
USP49-203ENST00000394253 MAP3K1Q13233 1512 aa14.23□□□□□ -0.13
USP49-203ENST00000394253 ADGRA3Q8IWK6 1321 aa14.23□□□□□ -0.13
USP49-203ENST00000394253 FAM47EQ6ZV65 393 aa14.23□□□□□ -0.13
USP49-203ENST00000394253 AGGF1Q8N302 714 aaeCLIP14.23□□□□□ -0.13
USP49-203ENST00000394253 PARP10Q53GL7 1025 aa14.23□□□□□ -0.13
USP49-203ENST00000394253 ABI1Q8IZP0 508 aa14.23□□□□□ -0.13
USP49-203ENST00000394253 APPBP2Q92624 585 aa14.23□□□□□ -0.13
USP49-203ENST00000394253 GINM1Q9NU53 330 aa14.23□□□□□ -0.13
USP49-203ENST00000394253 MRPL39Q9NYK5 338 aaKnown RBP14.23□□□□□ -0.13
USP49-203ENST00000394253 OR52Z1P0C646 297 aa14.23□□□□□ -0.13
USP49-203ENST00000394253 CMA1P23946 247 aa14.23□□□□□ -0.13
USP49-203ENST00000394253 FAM129AQ9BZQ8 928 aa14.23□□□□□ -0.13
USP49-203ENST00000394253 CYP19A1P11511 503 aaPredicted RBP14.22□□□□□ -0.13
USP49-203ENST00000394253 LMBR1LQ6UX01 489 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 ARMCX2Q7L311 632 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 DDIASQ8IXT1 998 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 RBM46Q8TBY0 533 aaKnown RBP14.22□□□□□ -0.13
USP49-203ENST00000394253 SEPT1Q8WYJ6 367 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 FAM210AQ96ND0 272 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 KCNK16Q96T55 309 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 APPL1Q9UKG1 709 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 DIDO1Q9BTC0 2240 aaKnown RBP14.22□□□□□ -0.13
USP49-203ENST00000394253 PRR23AA6NEV1 266 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 APOA4P06727 396 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 NCALDP61601 193 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 RNF219Q5W0B1 726 aaPredicted RBP14.22□□□□□ -0.13
USP49-203ENST00000394253 E4F1Q66K89 784 aaPredicted RBP14.22□□□□□ -0.13
USP49-203ENST00000394253 LRRC4Q9HBW1 653 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 LRRN2O75325 713 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 CFBP00751 764 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 S100A6P06703 90 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 EIF2B2P49770 351 aaKnown RBP14.22□□□□□ -0.13
USP49-203ENST00000394253 NCOA5Q9HCD5 579 aaKnown RBP14.22□□□□□ -0.13
USP49-203ENST00000394253 COPG2Q9UBF2 871 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 MAGED2Q9UNF1 606 aaPredicted RBP14.22□□□□□ -0.13
USP49-203ENST00000394253 SCAF11Q99590 1463 aaKnown RBP14.22□□□□□ -0.13
USP49-203ENST00000394253 LRRIQ4A6NIV6 560 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 GPAA1O43292 621 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 TGFBR2P37173 567 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 SLC7A5Q01650 507 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 COG2Q14746 738 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 FAM160B1Q5W0V3 765 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 GADD45BO75293 160 aaPredicted RBP14.22□□□□□ -0.13
USP49-203ENST00000394253 SFR1Q86XK3 245 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 GPIHBP1Q8IV16 184 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 FOXP3Q9BZS1 431 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 MAPKAPK2P49137 400 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 COX10Q12887 443 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 BBS9Q3SYG4 887 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 XAGE3Q8WTP9 111 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 TSSK1BQ9BXA7 367 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 NIP7Q9Y221 180 aaKnown RBP eCLIP14.22□□□□□ -0.13
USP49-203ENST00000394253 BCAP31P51572 246 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 MAN2A1Q16706 1144 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 TRIQKQ629K1 86 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 CHMP1BQ7LBR1 199 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 EFHBQ8N7U6 833 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 SAYSD1Q9NPB0 183 aa14.22□□□□□ -0.13
USP49-203ENST00000394253 TUBA8Q9NY65 449 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms