RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 RAD51CO43502 376 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 MYBP10242 640 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 CYP11B2P19099 503 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 POLD1P28340 1107 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 HSD17B3P37058 310 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 MEA1Q16626 185 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 NBPF20Q3BBV1 942 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 GNPTABQ3T906 1256 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 RBM26Q5T8P6 1007 aaKnown RBP10.82□□□□□ -0.68
PSEN1-204ENST00000394164 SFR1Q86XK3 245 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 FAM133AQ8N9E0 248 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 SCFD1Q8WVM8 642 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 ERGIC2Q96RQ1 377 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 TLR10Q9BXR5 811 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.82□□□□□ -0.68
PSEN1-204ENST00000394164 C15orf41Q9Y2V0 281 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.82□□□□□ -0.68
PSEN1-204ENST00000394164 COL4A3BPQ9Y5P4 624 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 TCP1P17987 556 aaKnown RBP10.82□□□□□ -0.68
PSEN1-204ENST00000394164 NR2F2P24468 414 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 FKBP3Q00688 224 aaKnown RBP10.82□□□□□ -0.68
PSEN1-204ENST00000394164 ADCY2Q08462 1091 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 PSMD2Q13200 908 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 XRCC4Q13426 336 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 CFAP221Q4G0U5 840 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 FAM83BQ5T0W9 1011 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 CCDC65Q8IXS2 484 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 KIF2BQ8N4N8 673 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 TATDN2Q93075 761 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 FBXO28Q9NVF7 368 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 ATF5Q9Y2D1 282 aaPredicted RBP10.82□□□□□ -0.68
PSEN1-204ENST00000394164 MYH4Q9Y623 1939 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 hCG_1984214I3L0E3 225 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 EML1O00423 815 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 LGR5O75473 907 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 BMP3P12645 472 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 FLT3P36888 993 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 EHHADHQ08426 723 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 DGKZQ13574 1117 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 GLE1Q53GS7 698 aaKnown RBP10.82□□□□□ -0.68
PSEN1-204ENST00000394164 SYDE2Q5VT97 1194 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 ZNF713Q8N859 430 aaPredicted RBP10.82□□□□□ -0.68
PSEN1-204ENST00000394164 CCT6BQ92526 530 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 CCDC17Q96LX7 622 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 PURBQ96QR8 312 aaKnown RBP10.82□□□□□ -0.68
PSEN1-204ENST00000394164 SELENOSQ9BQE4 189 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 REEP2Q9BRK0 252 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 ADAMTS1Q9UHI8 967 aa10.82□□□□□ -0.68
PSEN1-204ENST00000394164 SLC9A1P19634 815 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 SLC8A3P57103 927 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 KCNJ2P63252 427 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 STRIP1Q5VSL9 837 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 CDCA2Q69YH5 1023 aaPredicted RBP10.81□□□□□ -0.68
PSEN1-204ENST00000394164 CCDC26Q8TAB7 109 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 PACSIN1Q9BY11 444 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 GLIS2Q9BZE0 524 aaPredicted RBP10.81□□□□□ -0.68
PSEN1-204ENST00000394164 GDF3Q9NR23 364 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.81□□□□□ -0.683e-6■■■□□ 17.3
PSEN1-204ENST00000394164 ZBTB21Q9ULJ3 1066 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 PLAGL2Q9UPG8 496 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 PCDHB13Q9Y5F0 798 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 PLIN4Q96Q06 1357 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 YDJCA8MPS7 323 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 MSH4O15457 936 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 GCNT3O95395 438 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 CASP4P49662 377 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 NT5C2P49902 561 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 PPP2R2AP63151 447 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 LRRC63Q05C16 580 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 ZNF844Q08AG5 666 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 IFFO1Q0D2I5 559 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 ZC2HC1CQ53FD0 456 aaPredicted RBP10.81□□□□□ -0.68
PSEN1-204ENST00000394164 GJB7Q6PEY0 223 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 ARFGAP2Q8N6H7 521 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 RDH13Q8NBN7 331 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 HOOK2Q96ED9 719 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 RUSC1Q9BVN2 902 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 TSGA10Q9BZW7 698 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 TRIM31Q9BZY9 425 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 DHX36Q9H2U1 1008 aaKnown RBP10.81□□□□□ -0.68
PSEN1-204ENST00000394164 ZNF277Q9NRM2 450 aaPredicted RBP10.81□□□□□ -0.68
PSEN1-204ENST00000394164 HOMER2Q9NSB8 354 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 PRR12Q9ULL5 1215 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 G3BP2Q9UN86 482 aaKnown RBP10.81□□□□□ -0.68
PSEN1-204ENST00000394164 DNM3Q9UQ16 869 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 SUGT1Q9Y2Z0 365 aa10.81□□□□□ -0.68
PSEN1-204ENST00000394164 CTNND1O60716 968 aaKnown RBP10.8□□□□□ -0.68
PSEN1-204ENST00000394164 SNUPNO95149 360 aaKnown RBP10.8□□□□□ -0.68
PSEN1-204ENST00000394164 UAP1Q16222 522 aaPredicted RBP10.8□□□□□ -0.68
PSEN1-204ENST00000394164 KRT71Q3SY84 523 aa10.8□□□□□ -0.68
PSEN1-204ENST00000394164 KLHDC7AQ5VTJ3 777 aa10.8□□□□□ -0.68
PSEN1-204ENST00000394164 MIS18BP1Q6P0N0 1132 aa10.8□□□□□ -0.68
PSEN1-204ENST00000394164 TMEM179Q6ZVK1 233 aa10.8□□□□□ -0.68
PSEN1-204ENST00000394164 CCDC170Q8IYT3 715 aa10.8□□□□□ -0.68
PSEN1-204ENST00000394164 RETREG2Q8NC44 543 aa10.8□□□□□ -0.68
PSEN1-204ENST00000394164 BAP1Q92560 729 aa10.8□□□□□ -0.68
PSEN1-204ENST00000394164 AKT1S1Q96B36 256 aa10.8□□□□□ -0.68
PSEN1-204ENST00000394164 AP1M1Q9BXS5 423 aa10.8□□□□□ -0.68
PSEN1-204ENST00000394164 TMEM39BQ9GZU3 492 aa10.8□□□□□ -0.68
PSEN1-204ENST00000394164 NT5C3AQ9H0P0 336 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms