RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 SIP14410 1827 aa21.14■□□□□ 0.97
PDLIM7-204ENST00000393546 GRXCR1A8MXD5 290 aa21.14■□□□□ 0.97
PDLIM7-204ENST00000393546 SLC26A4O43511 780 aa21.14■□□□□ 0.97
PDLIM7-204ENST00000393546 AMHP03971 560 aa21.14■□□□□ 0.97
PDLIM7-204ENST00000393546 EIF4BP23588 611 aaKnown RBP21.14■□□□□ 0.97
PDLIM7-204ENST00000393546 NASPP49321 788 aaPredicted RBP21.14■□□□□ 0.97
PDLIM7-204ENST00000393546 NFX1Q12986 1120 aaKnown RBP21.14■□□□□ 0.97
PDLIM7-204ENST00000393546 STK38Q15208 465 aa21.14■□□□□ 0.97
PDLIM7-204ENST00000393546 FAM109BQ6ICB4 259 aaPredicted RBP21.14■□□□□ 0.97
PDLIM7-204ENST00000393546 CABP7Q86V35 215 aa21.14■□□□□ 0.97
PDLIM7-204ENST00000393546 ZNF410Q86VK4 478 aa21.14■□□□□ 0.97
PDLIM7-204ENST00000393546 PRPF31Q8WWY3 499 aaKnown RBP21.14■□□□□ 0.97
PDLIM7-204ENST00000393546 CDK5RAP3Q96JB5 506 aa21.14■□□□□ 0.97
PDLIM7-204ENST00000393546 FTHL17Q9BXU8 183 aa21.14■□□□□ 0.97
PDLIM7-204ENST00000393546 GCOM2Q9BZD3 368 aaPredicted RBP21.14■□□□□ 0.97
PDLIM7-204ENST00000393546 NT5C3AQ9H0P0 336 aa21.14■□□□□ 0.97
PDLIM7-204ENST00000393546 COL4A3BPQ9Y5P4 624 aa21.14■□□□□ 0.97
PDLIM7-204ENST00000393546 MORC2Q9Y6X9 1032 aaPredicted RBP21.14■□□□□ 0.97
PDLIM7-204ENST00000393546 RBAK-RBAKDNI3L0D1 243 aa21.13■□□□□ 0.97
PDLIM7-204ENST00000393546 USO1O60763 962 aaKnown RBP21.13■□□□□ 0.97
PDLIM7-204ENST00000393546 FOXD4L6Q3SYB3 417 aaPredicted RBP21.13■□□□□ 0.97
PDLIM7-204ENST00000393546 HYIQ5T013 277 aa21.13■□□□□ 0.97
PDLIM7-204ENST00000393546 ATL3Q6DD88 541 aa21.13■□□□□ 0.97
PDLIM7-204ENST00000393546 FOXD4L3Q6VB84 417 aaPredicted RBP21.13■□□□□ 0.97
PDLIM7-204ENST00000393546 TMEM40Q8WWA1 233 aa21.13■□□□□ 0.97
PDLIM7-204ENST00000393546 CALML4Q96GE6 196 aa21.13■□□□□ 0.97
PDLIM7-204ENST00000393546 INO80BQ9C086 356 aaPredicted RBP21.13■□□□□ 0.97
PDLIM7-204ENST00000393546 BHMT2Q9H2M3 363 aa21.13■□□□□ 0.97
PDLIM7-204ENST00000393546 ERVK-5Q9HDB9 667 aa21.13■□□□□ 0.97
PDLIM7-204ENST00000393546 XPNPEP1Q9NQW7 623 aa21.13■□□□□ 0.97
PDLIM7-204ENST00000393546 DAXXQ9UER7 740 aaPredicted RBP21.13■□□□□ 0.97
PDLIM7-204ENST00000393546 MSRAQ9UJ68 235 aa21.13■□□□□ 0.97
PDLIM7-204ENST00000393546 ST3GAL5Q9UNP4 418 aa21.13■□□□□ 0.97
PDLIM7-204ENST00000393546 ARID2Q68CP9 1835 aa21.13■□□□□ 0.97
PDLIM7-204ENST00000393546 A0A087WZ62 844 aa21.12■□□□□ 0.97
PDLIM7-204ENST00000393546 E9PMD0 336 aa21.12■□□□□ 0.97
PDLIM7-204ENST00000393546 ENPP3O14638 875 aa21.12■□□□□ 0.97
PDLIM7-204ENST00000393546 EYA4O95677 639 aa21.12■□□□□ 0.97
PDLIM7-204ENST00000393546 BRD1O95696 1058 aa21.12■□□□□ 0.97
PDLIM7-204ENST00000393546 DARSP14868 501 aaKnown RBP21.12■□□□□ 0.97
PDLIM7-204ENST00000393546 DEFB103AP81534 67 aa21.12■□□□□ 0.97
PDLIM7-204ENST00000393546 GRIN1Q05586 938 aa21.12■□□□□ 0.97
PDLIM7-204ENST00000393546 LAMTOR4Q0VGL1 99 aa21.12■□□□□ 0.97
PDLIM7-204ENST00000393546 MXD4Q14582 209 aaPredicted RBP21.12■□□□□ 0.97
PDLIM7-204ENST00000393546 GPR153Q6NV75 609 aa21.12■□□□□ 0.97
PDLIM7-204ENST00000393546 PADI6Q6TGC4 694 aa21.12■□□□□ 0.97
PDLIM7-204ENST00000393546 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.12■□□□□ 0.97
PDLIM7-204ENST00000393546 KSR1Q8IVT5 923 aa21.12■□□□□ 0.97
PDLIM7-204ENST00000393546 HERC6Q8IVU3 1022 aa21.12■□□□□ 0.97
PDLIM7-204ENST00000393546 LINC00301Q8NCQ3 95 aa21.12■□□□□ 0.97
PDLIM7-204ENST00000393546 MCPH1Q8NEM0 835 aa21.12■□□□□ 0.97
PDLIM7-204ENST00000393546 NLRP4Q96MN2 994 aa21.12■□□□□ 0.97
PDLIM7-204ENST00000393546 FDXACB1Q9BRP7 624 aaPredicted RBP21.12■□□□□ 0.97
PDLIM7-204ENST00000393546 FBXO2Q9UK22 296 aaPredicted RBP21.12■□□□□ 0.97
PDLIM7-204ENST00000393546 SRGAP2CP0DJJ0 459 aa21.11■□□□□ 0.97
PDLIM7-204ENST00000393546 CYP11B2P19099 503 aa21.11■□□□□ 0.97
PDLIM7-204ENST00000393546 GRB10Q13322 594 aa21.11■□□□□ 0.97
PDLIM7-204ENST00000393546 RAB30Q15771 203 aa21.11■□□□□ 0.97
PDLIM7-204ENST00000393546 MAEAQ7L5Y9 396 aa21.11■□□□□ 0.97
PDLIM7-204ENST00000393546 FAM228AQ86W67 206 aa21.11■□□□□ 0.97
PDLIM7-204ENST00000393546 MYOCDQ8IZQ8 938 aa21.11■□□□□ 0.97
PDLIM7-204ENST00000393546 KRI1Q8N9T8 703 aaKnown RBP21.11■□□□□ 0.97
PDLIM7-204ENST00000393546 PNMA5Q96PV4 448 aa21.11■□□□□ 0.97
PDLIM7-204ENST00000393546 PLIN2Q99541 437 aa21.11■□□□□ 0.97
PDLIM7-204ENST00000393546 ZBED2Q9BTP6 218 aa21.11■□□□□ 0.97
PDLIM7-204ENST00000393546 CSRNP2Q9H175 543 aa21.11■□□□□ 0.97
PDLIM7-204ENST00000393546 CFAP45Q9UL16 551 aa21.11■□□□□ 0.97
PDLIM7-204ENST00000393546 MICAL3Q7RTP6 2002 aa21.11■□□□□ 0.97
PDLIM7-204ENST00000393546 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.1■□□□□ 0.97
PDLIM7-204ENST00000393546 SPTLC2O15270 562 aa21.1■□□□□ 0.97
PDLIM7-204ENST00000393546 YEATS4O95619 227 aa21.1■□□□□ 0.97
PDLIM7-204ENST00000393546 ARL2P36404 184 aa21.1■□□□□ 0.97
PDLIM7-204ENST00000393546 RABGGTBP53611 331 aa21.1■□□□□ 0.97
PDLIM7-204ENST00000393546 TFDP1Q14186 410 aa21.1■□□□□ 0.97
PDLIM7-204ENST00000393546 RASSF8Q8NHQ8 419 aa21.1■□□□□ 0.97
PDLIM7-204ENST00000393546 CLIC6Q96NY7 704 aa21.1■□□□□ 0.97
PDLIM7-204ENST00000393546 PBX4Q9BYU1 374 aa21.1■□□□□ 0.97
PDLIM7-204ENST00000393546 ZDHHC9Q9Y397 364 aa21.1■□□□□ 0.97
PDLIM7-204ENST00000393546 PCDHA11Q9Y5I1 949 aa21.1■□□□□ 0.97
PDLIM7-204ENST00000393546 MYH15Q9Y2K3 1946 aa21.1■□□□□ 0.97
PDLIM7-204ENST00000393546 PPP6R2O75170 966 aa21.09■□□□□ 0.97
PDLIM7-204ENST00000393546 DNAJB2P25686 324 aa21.09■□□□□ 0.97
PDLIM7-204ENST00000393546 TMEM119Q4V9L6 283 aa21.09■□□□□ 0.97
PDLIM7-204ENST00000393546 FAM102BQ5T8I3 360 aa21.09■□□□□ 0.97
PDLIM7-204ENST00000393546 KCNK18Q7Z418 384 aa21.09■□□□□ 0.97
PDLIM7-204ENST00000393546 SRGAP1Q7Z6B7 1085 aa21.09■□□□□ 0.97
PDLIM7-204ENST00000393546 RTN4RL1Q86UN2 441 aaPredicted RBP21.09■□□□□ 0.97
PDLIM7-204ENST00000393546 RNF149Q8NC42 400 aa21.09■□□□□ 0.97
PDLIM7-204ENST00000393546 TOP1MTQ969P6 601 aa21.09■□□□□ 0.97
PDLIM7-204ENST00000393546 CCSER1Q9C0I3 900 aa21.09■□□□□ 0.97
PDLIM7-204ENST00000393546 POLR3FQ9H1D9 316 aaPredicted RBP21.09■□□□□ 0.97
PDLIM7-204ENST00000393546 TMX1Q9H3N1 280 aa21.09■□□□□ 0.97
PDLIM7-204ENST00000393546 DENND3A2RUS2 1198 aa21.08■□□□□ 0.97
PDLIM7-204ENST00000393546 TLL1O43897 1013 aa21.08■□□□□ 0.97
PDLIM7-204ENST00000393546 CSDE1O75534 798 aaKnown RBP21.08■□□□□ 0.97
PDLIM7-204ENST00000393546 GJB5O95377 273 aa21.08■□□□□ 0.97
PDLIM7-204ENST00000393546 SFPQP23246 707 aaKnown RBP eCLIP21.08■□□□□ 0.97
PDLIM7-204ENST00000393546 TXLNAP40222 546 aa21.08■□□□□ 0.97
PDLIM7-204ENST00000393546 PBX2P40425 430 aa21.08■□□□□ 0.97
PDLIM7-204ENST00000393546 POU5F1BQ06416 359 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms