RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 CES5AQ6NT32 575 aa9.13□□□□□ -0.95
CASP4-201ENST00000393150 TMEM87AQ8NBN3 555 aa9.13□□□□□ -0.95
CASP4-201ENST00000393150 TNPO1Q92973 898 aaKnown RBP9.13□□□□□ -0.95
CASP4-201ENST00000393150 MSLNLQ96KJ4 702 aa9.13□□□□□ -0.95
CASP4-201ENST00000393150 TTC14Q96N46 770 aa9.13□□□□□ -0.95
CASP4-201ENST00000393150 TUT1Q9H6E5 874 aaKnown RBP9.13□□□□□ -0.95
CASP4-201ENST00000393150 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.13□□□□□ -0.95
CASP4-201ENST00000393150 PUF60Q9UHX1 559 aaKnown RBP9.13□□□□□ -0.95
CASP4-201ENST00000393150 CCDC171Q6TFL3 1326 aa9.13□□□□□ -0.95
CASP4-201ENST00000393150 M0QZ92 97 aa9.12□□□□□ -0.95
CASP4-201ENST00000393150 LINC01565O15544 149 aa9.12□□□□□ -0.95
CASP4-201ENST00000393150 SMIM10L2AP0DMW4 78 aa9.12□□□□□ -0.95
CASP4-201ENST00000393150 SMIM10L2BP0DMW5 78 aa9.12□□□□□ -0.95
CASP4-201ENST00000393150 MYCLP12524 364 aaPredicted RBP9.12□□□□□ -0.95
CASP4-201ENST00000393150 EIF2AK2P19525 551 aaKnown RBP9.12□□□□□ -0.95
CASP4-201ENST00000393150 ATP4AP20648 1035 aa9.12□□□□□ -0.95
CASP4-201ENST00000393150 SDHBP21912 280 aa9.12□□□□□ -0.95
CASP4-201ENST00000393150 GTF2F1P35269 517 aaKnown RBP eCLIP9.12□□□□□ -0.95
CASP4-201ENST00000393150 CLCN5P51795 746 aa9.12□□□□□ -0.95
CASP4-201ENST00000393150 MFAP1P55081 439 aaKnown RBP9.12□□□□□ -0.95
CASP4-201ENST00000393150 ARHGAP4P98171 946 aa9.12□□□□□ -0.95
CASP4-201ENST00000393150 UBE3AQ05086 875 aa9.12□□□□□ -0.95
CASP4-201ENST00000393150 PUM1Q14671 1186 aaKnown RBP eCLIP9.12□□□□□ -0.95
CASP4-201ENST00000393150 RTN1Q16799 776 aa9.12□□□□□ -0.95
CASP4-201ENST00000393150 GNPTABQ3T906 1256 aa9.12□□□□□ -0.95
CASP4-201ENST00000393150 CCDC178Q5BJE1 867 aa9.12□□□□□ -0.95
CASP4-201ENST00000393150 CELF3Q5SZQ8 465 aaKnown RBP9.12□□□□□ -0.95
CASP4-201ENST00000393150 TAF2Q6P1X5 1199 aa9.12□□□□□ -0.95
CASP4-201ENST00000393150 RUFY4Q6ZNE9 571 aa9.12□□□□□ -0.95
CASP4-201ENST00000393150 FRMD5Q7Z6J6 570 aa9.12□□□□□ -0.95
CASP4-201ENST00000393150 KREMEN2Q8NCW0 462 aa9.12□□□□□ -0.95
CASP4-201ENST00000393150 POF1BQ8WVV4 589 aa9.12□□□□□ -0.95
CASP4-201ENST00000393150 ASIC4Q96FT7 647 aa9.12□□□□□ -0.95
CASP4-201ENST00000393150 NECTIN4Q96NY8 510 aa9.12□□□□□ -0.95
CASP4-201ENST00000393150 FTHL17Q9BXU8 183 aa9.12□□□□□ -0.95
CASP4-201ENST00000393150 ZDHHC3Q9NYG2 299 aa9.12□□□□□ -0.95
CASP4-201ENST00000393150 DDX19BQ9UMR2 479 aa9.12□□□□□ -0.95
CASP4-201ENST00000393150 SORCS3Q9UPU3 1222 aa9.12□□□□□ -0.95
CASP4-201ENST00000393150 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.11□□□□□ -0.95
CASP4-201ENST00000393150 TREHO43280 583 aa9.11□□□□□ -0.95
CASP4-201ENST00000393150 PPFIA3O75145 1194 aa9.11□□□□□ -0.95
CASP4-201ENST00000393150 GGPS1O95749 300 aa9.11□□□□□ -0.95
CASP4-201ENST00000393150 CHGBP05060 677 aa9.11□□□□□ -0.95
CASP4-201ENST00000393150 HOXB8P17481 243 aaPredicted RBP9.11□□□□□ -0.95
CASP4-201ENST00000393150 FAM43BQ6ZT52 329 aaPredicted RBP9.11□□□□□ -0.95
CASP4-201ENST00000393150 CMTR2Q8IYT2 770 aaKnown RBP9.11□□□□□ -0.95
CASP4-201ENST00000393150 SYTL5Q8TDW5 730 aaPredicted RBP9.11□□□□□ -0.95
CASP4-201ENST00000393150 TAAR1Q96RJ0 339 aa9.11□□□□□ -0.95
CASP4-201ENST00000393150 TMEM47Q9BQJ4 181 aa9.11□□□□□ -0.95
CASP4-201ENST00000393150 EPB41L4AQ9HCS5 686 aaPredicted RBP9.11□□□□□ -0.95
CASP4-201ENST00000393150 IL17RBQ9NRM6 502 aa9.11□□□□□ -0.95
CASP4-201ENST00000393150 MAP3K20Q9NYL2 800 aaKnown RBP9.11□□□□□ -0.95
CASP4-201ENST00000393150 BARX2Q9UMQ3 279 aaPredicted RBP9.11□□□□□ -0.95
CASP4-201ENST00000393150 C5orf42Q9H799 3197 aa9.11□□□□□ -0.95
CASP4-201ENST00000393150 GREB1LQ9C091 1923 aaPredicted RBP9.11□□□□□ -0.95
CASP4-201ENST00000393150 SOBPA7XYQ1 873 aa9.1□□□□□ -0.95
CASP4-201ENST00000393150 ENPP3O14638 875 aa9.1□□□□□ -0.95
CASP4-201ENST00000393150 ZBTB39O15060 712 aa9.1□□□□□ -0.95
CASP4-201ENST00000393150 NMT2O60551 498 aa9.1□□□□□ -0.95
CASP4-201ENST00000393150 CFBP00751 764 aa9.1□□□□□ -0.95
CASP4-201ENST00000393150 PDHBP11177 359 aa9.1□□□□□ -0.95
CASP4-201ENST00000393150 MPSTP25325 297 aa9.1□□□□□ -0.95
CASP4-201ENST00000393150 CCND2P30279 289 aa9.1□□□□□ -0.95
CASP4-201ENST00000393150 ZNF543Q08ER8 600 aa9.1□□□□□ -0.95
CASP4-201ENST00000393150 NEDD9Q14511 834 aa9.1□□□□□ -0.95
CASP4-201ENST00000393150 ZNF787Q6DD87 383 aa9.1□□□□□ -0.95
CASP4-201ENST00000393150 ZC3H14Q6PJT7 736 aaKnown RBP9.1□□□□□ -0.95
CASP4-201ENST00000393150 NPAS4Q8IUM7 802 aa9.1□□□□□ -0.95
CASP4-201ENST00000393150 SAMD3Q8N6K7 520 aa9.1□□□□□ -0.95
CASP4-201ENST00000393150 KLHL23Q8NBE8 558 aa9.1□□□□□ -0.95
CASP4-201ENST00000393150 FLCNQ8NFG4 579 aa9.1□□□□□ -0.95
CASP4-201ENST00000393150 SPPL3Q8TCT6 385 aa9.1□□□□□ -0.95
CASP4-201ENST00000393150 WNT8BQ93098 351 aa9.1□□□□□ -0.95
CASP4-201ENST00000393150 RNPEPQ9H4A4 650 aa9.1□□□□□ -0.95
CASP4-201ENST00000393150 TCP11L1Q9NUJ3 509 aa9.1□□□□□ -0.95
CASP4-201ENST00000393150 KLK14Q9P0G3 267 aa9.1□□□□□ -0.95
CASP4-201ENST00000393150 CLEC1BQ9P126 229 aa9.1□□□□□ -0.95
CASP4-201ENST00000393150 NRCAMQ92823 1304 aa9.1□□□□□ -0.95
CASP4-201ENST00000393150 TPRP12270 2363 aaKnown RBP9.1□□□□□ -0.95
CASP4-201ENST00000393150 PTPRSQ13332 1948 aa9.09□□□□□ -0.95
CASP4-201ENST00000393150 M0R2C6 588 aa9.09□□□□□ -0.95
CASP4-201ENST00000393150 ORC4O43929 436 aa9.09□□□□□ -0.95
CASP4-201ENST00000393150 DGKIO75912 1065 aa9.09□□□□□ -0.95
CASP4-201ENST00000393150 LMNAP02545 664 aaKnown RBP9.09□□□□□ -0.95
CASP4-201ENST00000393150 ITGB1P05556 798 aa9.09□□□□□ -0.95
CASP4-201ENST00000393150 GHRP10912 638 aa9.09□□□□□ -0.95
CASP4-201ENST00000393150 PCP11498 1178 aaKnown RBP9.09□□□□□ -0.95
CASP4-201ENST00000393150 HOXD8P13378 290 aaPredicted RBP9.09□□□□□ -0.95
CASP4-201ENST00000393150 TECP42680 631 aa9.09□□□□□ -0.95
CASP4-201ENST00000393150 KRT17Q04695 432 aa9.09□□□□□ -0.95
CASP4-201ENST00000393150 CDC37Q16543 378 aaPredicted RBP9.09□□□□□ -0.95
CASP4-201ENST00000393150 HSDL1Q3SXM5 330 aa9.09□□□□□ -0.95
CASP4-201ENST00000393150 ODR4Q5SWX8 454 aa9.09□□□□□ -0.95
CASP4-201ENST00000393150 IER5Q5VY09 327 aa9.09□□□□□ -0.95
CASP4-201ENST00000393150 GLYCTKQ8IVS8 523 aa9.09□□□□□ -0.95
CASP4-201ENST00000393150 THNSL1Q8IYQ7 743 aa9.09□□□□□ -0.95
CASP4-201ENST00000393150 RTP3Q9BQQ7 232 aa9.09□□□□□ -0.95
CASP4-201ENST00000393150 RNF41Q9H4P4 317 aaPredicted RBP9.09□□□□□ -0.95
CASP4-201ENST00000393150 PXMP2Q9NR77 195 aa9.09□□□□□ -0.95
CASP4-201ENST00000393150 SETD4Q9NVD3 440 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms