RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 C2orf40Q9H1Z8 148 aa17.86■□□□□ 0.45
SCN3B-202ENST00000392770 IQCA1LA6NCM1 817 aa17.85■□□□□ 0.45
SCN3B-202ENST00000392770 TKFCQ3LXA3 575 aa17.85■□□□□ 0.45
SCN3B-202ENST00000392770 ATP2A3Q93084 1043 aa17.85■□□□□ 0.45
SCN3B-202ENST00000392770 SLC12A2P55011 1212 aa17.85■□□□□ 0.45
SCN3B-202ENST00000392770 DRAP1Q14919 205 aaPredicted RBP17.85■□□□□ 0.45
SCN3B-202ENST00000392770 HAUS6Q7Z4H7 955 aa17.85■□□□□ 0.45
SCN3B-202ENST00000392770 PASD1Q8IV76 773 aa17.85■□□□□ 0.45
SCN3B-202ENST00000392770 ZDHHC15Q96MV8 337 aa17.85■□□□□ 0.45
SCN3B-202ENST00000392770 SCINQ9Y6U3 715 aa17.85■□□□□ 0.45
SCN3B-202ENST00000392770 CIB2O75838 187 aa17.85■□□□□ 0.45
SCN3B-202ENST00000392770 ZNF131P52739 623 aa17.85■□□□□ 0.45
SCN3B-202ENST00000392770 SLC26A4O43511 780 aa17.85■□□□□ 0.45
SCN3B-202ENST00000392770 TRIM49P0CI25 452 aa17.85■□□□□ 0.45
SCN3B-202ENST00000392770 TRIM49CP0CI26 452 aa17.85■□□□□ 0.45
SCN3B-202ENST00000392770 KCTD16Q68DU8 428 aa17.85■□□□□ 0.45
SCN3B-202ENST00000392770 TEX13BQ9BXU2 312 aa17.85■□□□□ 0.45
SCN3B-202ENST00000392770 MAD1L1Q9Y6D9 718 aa17.85■□□□□ 0.45
SCN3B-202ENST00000392770 PDXKO00764 312 aa17.85■□□□□ 0.45
SCN3B-202ENST00000392770 MCF2LO15068 1137 aa17.85■□□□□ 0.45
SCN3B-202ENST00000392770 OATP04181 439 aa17.85■□□□□ 0.45
SCN3B-202ENST00000392770 OR6B3Q8NGW1 331 aa17.85■□□□□ 0.45
SCN3B-202ENST00000392770 MRPL4Q9BYD3 311 aaKnown RBP17.85■□□□□ 0.45
SCN3B-202ENST00000392770 HOMER3Q9NSC5 361 aa17.85■□□□□ 0.45
SCN3B-202ENST00000392770 POLRMTO00411 1230 aaKnown RBP17.84■□□□□ 0.45
SCN3B-202ENST00000392770 HSPA6P17066 643 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 INPP5BP32019 993 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 DR1Q01658 176 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 PDXDC1Q6P996 788 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 TMEM270Q6UE05 265 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 CEP57Q86XR8 500 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 PRMT6Q96LA8 375 aaPredicted RBP17.84■□□□□ 0.45
SCN3B-202ENST00000392770 ANAPC5Q9UJX4 755 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 CAPN11Q9UMQ6 739 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 CTNND1O60716 968 aaKnown RBP17.84■□□□□ 0.45
SCN3B-202ENST00000392770 TRIP13Q15645 432 aaPredicted RBP17.84■□□□□ 0.45
SCN3B-202ENST00000392770 VPS52Q8N1B4 723 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 RBM46Q8TBY0 533 aaKnown RBP17.84■□□□□ 0.45
SCN3B-202ENST00000392770 CALN1Q9BXU9 219 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 A0A1B0GTH6 734 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 LRRD1A4D1F6 860 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 ASB14A6NK59 587 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 PRPSAP2O60256 369 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 GNAT1P11488 350 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 FXR2P51116 673 aaKnown RBP eCLIP17.84■□□□□ 0.45
SCN3B-202ENST00000392770 YWHAGP61981 247 aaKnown RBP eCLIP17.84■□□□□ 0.45
SCN3B-202ENST00000392770 PPP2R5CQ13362 524 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 SIX6OS1Q8N1H7 587 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 AGBL1Q96MI9 1066 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 ZWILCHQ9H900 591 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 SALL1Q9NSC2 1324 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 ATP8B1O43520 1251 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 NFIAQ12857 509 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 AFAP1L2Q8N4X5 818 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 LRRC4Q9HBW1 653 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 ATP8A1Q9Y2Q0 1164 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 ATP8B3O60423 1300 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 SLC16A3O15427 465 aaKnown RBP17.84■□□□□ 0.45
SCN3B-202ENST00000392770 RWDD2BP57060 319 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 DEFB129Q9H1M3 183 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 ADGRG1Q9Y653 693 aa17.84■□□□□ 0.45
SCN3B-202ENST00000392770 EMSYQ7Z589 1322 aa17.83■□□□□ 0.45
SCN3B-202ENST00000392770 TTC19Q6DKK2 380 aaPredicted RBP17.83■□□□□ 0.45
SCN3B-202ENST00000392770 DARS2Q6PI48 645 aaKnown RBP17.83■□□□□ 0.45
SCN3B-202ENST00000392770 SLC16A10Q8TF71 515 aa17.83■□□□□ 0.45
SCN3B-202ENST00000392770 CNOT8Q9UFF9 292 aaKnown RBP17.83■□□□□ 0.45
SCN3B-202ENST00000392770 PIK3C2AO00443 1686 aa17.83■□□□□ 0.45
SCN3B-202ENST00000392770 GPC5P78333 572 aa17.83■□□□□ 0.45
SCN3B-202ENST00000392770 PRPSAP1Q14558 356 aa17.83■□□□□ 0.45
SCN3B-202ENST00000392770 SEC23AQ15436 765 aa17.83■□□□□ 0.45
SCN3B-202ENST00000392770 MKRN1Q9UHC7 482 aaKnown RBP17.83■□□□□ 0.45
SCN3B-202ENST00000392770 CLCN6P51797 869 aa17.83■□□□□ 0.44
SCN3B-202ENST00000392770 KRT39Q6A163 491 aa17.83■□□□□ 0.44
SCN3B-202ENST00000392770 DSTYKQ6XUX3 929 aa17.83■□□□□ 0.44
SCN3B-202ENST00000392770 ZMYND15Q9H091 742 aa17.83■□□□□ 0.44
SCN3B-202ENST00000392770 ESYT2A0FGR8 921 aa17.83■□□□□ 0.44
SCN3B-202ENST00000392770 FGGP02679 453 aa17.83■□□□□ 0.44
SCN3B-202ENST00000392770 MYBP10242 640 aa17.83■□□□□ 0.44
SCN3B-202ENST00000392770 PSMA2P25787 234 aa17.83■□□□□ 0.44
SCN3B-202ENST00000392770 VSIG1Q86XK7 387 aa17.83■□□□□ 0.44
SCN3B-202ENST00000392770 SLC4A9Q96Q91 983 aa17.83■□□□□ 0.44
SCN3B-202ENST00000392770 ARPP19P56211 112 aa17.82■□□□□ 0.44
SCN3B-202ENST00000392770 HSPH1Q92598 858 aa17.82■□□□□ 0.44
SCN3B-202ENST00000392770 MXRA8Q9BRK3 442 aa17.82■□□□□ 0.44
SCN3B-202ENST00000392770 POC1B-GALNT4F8VUJ3 575 aa17.82■□□□□ 0.44
SCN3B-202ENST00000392770 KCNF1Q9H3M0 494 aa17.82■□□□□ 0.44
SCN3B-202ENST00000392770 ADAM22Q9P0K1 906 aa17.82■□□□□ 0.44
SCN3B-202ENST00000392770 ANAPC7Q9UJX3 599 aa17.82■□□□□ 0.44
SCN3B-202ENST00000392770 DIS3Q9Y2L1 958 aaKnown RBP17.82■□□□□ 0.44
SCN3B-202ENST00000392770 TIPINQ9BVW5 301 aa17.82■□□□□ 0.44
SCN3B-202ENST00000392770 SLC37A4O43826 429 aa17.82■□□□□ 0.44
SCN3B-202ENST00000392770 ARL4AP40617 200 aa17.82■□□□□ 0.44
SCN3B-202ENST00000392770 RSRC2Q7L4I2 434 aaKnown RBP17.82■□□□□ 0.44
SCN3B-202ENST00000392770 SH2D3AQ9BRG2 576 aa17.82■□□□□ 0.44
SCN3B-202ENST00000392770 NFX1Q12986 1120 aaKnown RBP17.82■□□□□ 0.44
SCN3B-202ENST00000392770 STK4Q13043 487 aa17.82■□□□□ 0.44
SCN3B-202ENST00000392770 PTPAQ15257 358 aa17.82■□□□□ 0.44
SCN3B-202ENST00000392770 CDO1Q16878 200 aa17.82■□□□□ 0.44
SCN3B-202ENST00000392770 GKAP1Q5VSY0 366 aaPredicted RBP17.82■□□□□ 0.44
SCN3B-202ENST00000392770 CCDC62Q6P9F0 684 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms