RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 PIN4Q9Y237 131 aaKnown RBP11.06□□□□□ -0.64
PKP4-201ENST00000389757 PPP2R3BQ9Y5P8 575 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 VWDEQ8N2E2 1590 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 MAGEB2O15479 319 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 MAFGO15525 162 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 PRKCBP05771 671 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 SEMA3FQ13275 785 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 TMEM270Q6UE05 265 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 SAAL1Q96ER3 474 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 ZNF560Q96MR9 790 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 GDAP1L1Q96MZ0 367 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 NCAPGQ9BPX3 1015 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 ADAM22Q9P0K1 906 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 PTPN22Q9Y2R2 807 aa11.06□□□□□ -0.64
PKP4-201ENST00000389757 KCNJ6P48051 423 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 AP3M2P53677 418 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 MXD4Q14582 209 aaPredicted RBP11.05□□□□□ -0.64
PKP4-201ENST00000389757 BRD3Q15059 726 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 ARHGEF18Q6ZSZ5 1173 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 NRBP1Q9UHY1 535 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 ESYT2A0FGR8 921 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 PGRMC1O00264 195 aaKnown RBP11.05□□□□□ -0.64
PKP4-201ENST00000389757 HSPA6P17066 643 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 PSMA2P25787 234 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 KCNH2Q12809 1159 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 KRT39Q6A163 491 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 DARS2Q6PI48 645 aaKnown RBP11.05□□□□□ -0.64
PKP4-201ENST00000389757 TOGARAM2Q6ZUX3 1019 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 AGBL1Q96MI9 1066 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 ARHGAP23Q9P227 1491 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 CDO1Q16878 200 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 C1orf228Q6PIY5 440 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 RHOT2Q8IXI1 618 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 SMAP1Q8IYB5 467 aaPredicted RBP11.05□□□□□ -0.64
PKP4-201ENST00000389757 FMR1NBQ8N0W7 255 aaPredicted RBP11.05□□□□□ -0.64
PKP4-201ENST00000389757 DNAAF3Q8N9W5 541 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 KIF12Q96FN5 646 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 SPTLC3Q9NUV7 552 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 CEP72Q9P209 647 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 ADAMTS1Q9UHI8 967 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 STXBP3O00186 592 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 DPYSL4O14531 572 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 ATP1A3P13637 1013 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 SAT1P21673 171 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 NFIAQ12857 509 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 IER5Q5VY09 327 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 LGALS16A8MUM7 142 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 ENC1O14682 589 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 CIB2O75838 187 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 ANTXR2P58335 489 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 ZNF449Q6P9G9 518 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 SCYL1Q96KG9 808 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 ACAP3Q96P50 834 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 PANX2Q96RD6 677 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 GOLPH3LQ9H4A5 285 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 OGFRQ9NZT2 677 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 NOC2LQ9Y3T9 749 aaKnown RBP11.05□□□□□ -0.64
PKP4-201ENST00000389757 JRKLQ9Y4A0 524 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 PCDHA13Q9Y5I0 950 aa11.05□□□□□ -0.64
PKP4-201ENST00000389757 NDUFAB1O14561 156 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 KIAA0391O15091 583 aaKnown RBP11.04□□□□□ -0.64
PKP4-201ENST00000389757 STX2P32856 288 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 DUOXA2Q1HG44 320 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 GAS2L3Q86XJ1 694 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 CCDC13Q8IYE1 715 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 ANKRD42Q8N9B4 389 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 PPP4R1Q8TF05 950 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 PPP1R13BQ96KQ4 1090 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 EFCAB8A8MWE9 144 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 HEXIM1O94992 359 aaKnown RBP11.04□□□□□ -0.64
PKP4-201ENST00000389757 NDUFA10O95299 355 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 CTSHP09668 335 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 EPHB1P54762 984 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 BZW1Q7L1Q6 419 aaKnown RBP11.04□□□□□ -0.64
PKP4-201ENST00000389757 ACRBPQ8NEB7 543 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 MYRIPQ8NFW9 859 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 TTC1Q99614 292 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 LBHD1Q9BQE6 289 aaPredicted RBP11.04□□□□□ -0.64
PKP4-201ENST00000389757 MXRA8Q9BRK3 442 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 PIDD1Q9HB75 910 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 HOMER3Q9NSC5 361 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 FAM217BQ9NTX9 383 aaPredicted RBP11.04□□□□□ -0.64
PKP4-201ENST00000389757 PXDNQ92626 1479 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 ECEL1O95672 775 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 FTCDO95954 541 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 GUCY2DQ02846 1103 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 SNX1Q13596 522 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 CEP85LQ5SZL2 805 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.04□□□□□ -0.641e-7■■■■■ 35.3
PKP4-201ENST00000389757 CCSER1Q9C0I3 900 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 CDC23Q9UJX2 597 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 NEURL4Q96JN8 1562 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 RGS2P41220 211 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 RWDD4Q6NW29 188 aaKnown RBP11.04□□□□□ -0.64
PKP4-201ENST00000389757 SDCCAG8Q86SQ7 713 aaPredicted RBP11.04□□□□□ -0.64
PKP4-201ENST00000389757 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.04□□□□□ -0.64
PKP4-201ENST00000389757 STRIP2Q9ULQ0 834 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 DAAM1Q9Y4D1 1078 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 PPLO60437 1756 aa11.04□□□□□ -0.64
PKP4-201ENST00000389757 SOWAHDA6NJG2 315 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms