RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 SLITRK3O94933 977 aa13.56□□□□□ -0.24
CDX2-201ENST00000381020 HERVK_113P62684 666 aa13.56□□□□□ -0.24
CDX2-201ENST00000381020 SEPT7Q16181 437 aaKnown RBP13.56□□□□□ -0.24
CDX2-201ENST00000381020 TKFCQ3LXA3 575 aa13.56□□□□□ -0.24
CDX2-201ENST00000381020 ZNF394Q53GI3 561 aa13.56□□□□□ -0.24
CDX2-201ENST00000381020 RNF187Q5TA31 235 aaPredicted RBP13.56□□□□□ -0.24
CDX2-201ENST00000381020 TTC19Q6DKK2 380 aaPredicted RBP13.56□□□□□ -0.24
CDX2-201ENST00000381020 APOBEC3FQ8IUX4 373 aaKnown RBP13.56□□□□□ -0.24
CDX2-201ENST00000381020 DNAJC19Q96DA6 116 aa13.56□□□□□ -0.24
CDX2-201ENST00000381020 MRIQ9BWK5 157 aa13.56□□□□□ -0.24
CDX2-201ENST00000381020 ELP3Q9H9T3 547 aa13.56□□□□□ -0.24
CDX2-201ENST00000381020 ASIC3Q9UHC3 531 aa13.56□□□□□ -0.24
CDX2-201ENST00000381020 CD58P19256 250 aa13.56□□□□□ -0.24
CDX2-201ENST00000381020 ATP1A2P50993 1020 aa13.56□□□□□ -0.24
CDX2-201ENST00000381020 TFAMQ00059 246 aaKnown RBP13.56□□□□□ -0.24
CDX2-201ENST00000381020 OTOP1Q7RTM1 612 aa13.56□□□□□ -0.24
CDX2-201ENST00000381020 ZBTB8OSQ8IWT0 167 aa13.56□□□□□ -0.24
CDX2-201ENST00000381020 TMEM143Q96AN5 459 aa13.56□□□□□ -0.24
CDX2-201ENST00000381020 RIT2Q99578 217 aa13.56□□□□□ -0.24
CDX2-201ENST00000381020 IKZF4Q9H2S9 585 aa13.56□□□□□ -0.24
CDX2-201ENST00000381020 ATP2C2O75185 946 aa13.55□□□□□ -0.24
CDX2-201ENST00000381020 SLC18A3Q16572 532 aa13.55□□□□□ -0.24
CDX2-201ENST00000381020 MOXD1Q6UVY6 613 aa13.55□□□□□ -0.24
CDX2-201ENST00000381020 FAM83AQ86UY5 434 aa13.55□□□□□ -0.24
CDX2-201ENST00000381020 NEK9Q8TD19 979 aa13.55□□□□□ -0.24
CDX2-201ENST00000381020 ANO9A1A5B4 782 aa13.55□□□□□ -0.24
CDX2-201ENST00000381020 ANKRD62A6NC57 917 aa13.55□□□□□ -0.24
CDX2-201ENST00000381020 TMOD1P28289 359 aa13.55□□□□□ -0.24
CDX2-201ENST00000381020 HOXA7P31268 230 aaPredicted RBP13.55□□□□□ -0.24
CDX2-201ENST00000381020 SSTR3P32745 418 aaPredicted RBP13.55□□□□□ -0.24
CDX2-201ENST00000381020 IREB2P48200 963 aaKnown RBP13.55□□□□□ -0.24
CDX2-201ENST00000381020 FMO5P49326 533 aa13.55□□□□□ -0.24
CDX2-201ENST00000381020 SOX10P56693 466 aa13.55□□□□□ -0.24
CDX2-201ENST00000381020 ZNF211Q13398 564 aaPredicted RBP13.55□□□□□ -0.24
CDX2-201ENST00000381020 Q4G0T1 1027 aa13.55□□□□□ -0.24
CDX2-201ENST00000381020 THNSL1Q8IYQ7 743 aa13.55□□□□□ -0.24
CDX2-201ENST00000381020 COG1Q8WTW3 980 aa13.55□□□□□ -0.24
CDX2-201ENST00000381020 JPH1Q9HDC5 661 aaPredicted RBP13.55□□□□□ -0.24
CDX2-201ENST00000381020 NFU1Q9UMS0 254 aa13.55□□□□□ -0.24
CDX2-201ENST00000381020 PCDHB4Q9Y5E5 795 aa13.55□□□□□ -0.24
CDX2-201ENST00000381020 ZNF233A6NK53 670 aa13.55□□□□□ -0.24
CDX2-201ENST00000381020 LIN9Q5TKA1 542 aa13.55□□□□□ -0.24
CDX2-201ENST00000381020 SYTL5Q8TDW5 730 aaPredicted RBP13.55□□□□□ -0.24
CDX2-201ENST00000381020 KCNMB3Q9NPA1 279 aa13.55□□□□□ -0.24
CDX2-201ENST00000381020 PTPN22Q9Y2R2 807 aa13.55□□□□□ -0.24
CDX2-201ENST00000381020 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.55□□□□□ -0.24
CDX2-201ENST00000381020 EVI5O60447 810 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 TMEM139Q8IV31 216 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 SPATA4Q8NEY3 305 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 MRRFQ96E11 262 aaKnown RBP13.54□□□□□ -0.24
CDX2-201ENST00000381020 SELENOSQ9BQE4 189 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 NXF1Q9UBU9 619 aaKnown RBP13.54□□□□□ -0.24
CDX2-201ENST00000381020 SLC9A2Q9UBY0 812 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 SNX12Q9UMY4 172 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 SNED1Q8TER0 1413 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 TOGARAM1Q9Y4F4 1720 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 PGRMC1O00264 195 aaKnown RBP13.54□□□□□ -0.24
CDX2-201ENST00000381020 TMEM191BP0C7N4 346 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 DESP17661 470 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 SFNP31947 248 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 MUM1L1Q5H9M0 696 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 CEP85LQ5SZL2 805 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 WDR18Q9BV38 432 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 PACSIN1Q9BY11 444 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 EDEM3Q9BZQ6 932 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 AGPAT3Q9NRZ7 376 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 MTRF1LQ9UGC7 380 aaKnown RBP13.54□□□□□ -0.24
CDX2-201ENST00000381020 NSFP46459 744 aaKnown RBP13.54□□□□□ -0.24
CDX2-201ENST00000381020 JAG1P78504 1218 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 FAM160B1Q5W0V3 765 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 MCPH1Q8NEM0 835 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 ELMO3Q96BJ8 720 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 CBWD1Q9BRT8 395 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 LRRC1Q9BTT6 524 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 MSTO1Q9BUK6 570 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 HSPBP1Q9NZL4 362 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 MYH13Q9UKX3 1938 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 IGKV6D-41A0A0C4DH26 115 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 KLRG2A4D1S0 409 aaPredicted RBP13.54□□□□□ -0.24
CDX2-201ENST00000381020 M0R2N6 131 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 ACOT2P49753 483 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 BACE1P56817 501 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 KLHDC7AQ5VTJ3 777 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 TRIM59Q8IWR1 403 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 ZNF507Q8TCN5 953 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 MAGOHBQ96A72 148 aaKnown RBP13.54□□□□□ -0.24
CDX2-201ENST00000381020 PSMD1Q99460 953 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 DDX47Q9H0S4 455 aaKnown RBP13.54□□□□□ -0.24
CDX2-201ENST00000381020 POLR3FQ9H1D9 316 aaPredicted RBP13.54□□□□□ -0.24
CDX2-201ENST00000381020 ATP6V0A4Q9HBG4 840 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 ODF2LQ9ULJ1 636 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 PPP1R9AQ9ULJ8 1098 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 USP20Q9Y2K6 914 aa13.54□□□□□ -0.24
CDX2-201ENST00000381020 SSU72P8A0A1W2PR75 194 aa13.53□□□□□ -0.24
CDX2-201ENST00000381020 FGGP02679 453 aa13.53□□□□□ -0.24
CDX2-201ENST00000381020 FKBP1AP62942 108 aaKnown RBP13.53□□□□□ -0.24
CDX2-201ENST00000381020 BFSP1Q12934 665 aa13.53□□□□□ -0.24
CDX2-201ENST00000381020 PASD1Q8IV76 773 aa13.53□□□□□ -0.24
CDX2-201ENST00000381020 VTI1AQ96AJ9 217 aa13.53□□□□□ -0.24
CDX2-201ENST00000381020 FAM204AQ9H8W3 233 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms