RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 ABL1P00519 1130 aa21.75■■□□□ 1.07
PDLIM5-205ENST00000380180 CYP2C8P10632 490 aa21.75■■□□□ 1.07
PDLIM5-205ENST00000380180 NCKAP1LP55160 1127 aa21.75■■□□□ 1.07
PDLIM5-205ENST00000380180 FGD4Q96M96 766 aa21.75■■□□□ 1.07
PDLIM5-205ENST00000380180 MMP19Q99542 508 aa21.75■■□□□ 1.07
PDLIM5-205ENST00000380180 FRMD4BQ9Y2L6 1034 aa21.75■■□□□ 1.07
PDLIM5-205ENST00000380180 PLEKP08567 350 aaPredicted RBP21.75■■□□□ 1.07
PDLIM5-205ENST00000380180 CYLC1P35663 651 aaPredicted RBP21.75■■□□□ 1.07
PDLIM5-205ENST00000380180 POLR2FP61218 127 aaKnown RBP21.75■■□□□ 1.07
PDLIM5-205ENST00000380180 ERVK-9P63128 1117 aa21.75■■□□□ 1.07
PDLIM5-205ENST00000380180 KCTD2Q14681 263 aa21.75■■□□□ 1.07
PDLIM5-205ENST00000380180 ARHGAP29Q52LW3 1261 aa21.75■■□□□ 1.07
PDLIM5-205ENST00000380180 WDR78Q5VTH9 848 aa21.75■■□□□ 1.07
PDLIM5-205ENST00000380180 PDXDC1Q6P996 788 aa21.75■■□□□ 1.07
PDLIM5-205ENST00000380180 SLC9A9Q8IVB4 645 aa21.75■■□□□ 1.07
PDLIM5-205ENST00000380180 MROH8Q9H579 483 aa21.75■■□□□ 1.07
PDLIM5-205ENST00000380180 ZNF302Q9NR11 478 aa21.75■■□□□ 1.07
PDLIM5-205ENST00000380180 PDLIM7Q9NR12 457 aa21.75■■□□□ 1.07
PDLIM5-205ENST00000380180 CYP26B1Q9NR63 512 aa21.75■■□□□ 1.07
PDLIM5-205ENST00000380180 ARHGAP20Q9P2F6 1191 aa21.75■■□□□ 1.07
PDLIM5-205ENST00000380180 MAFBQ9Y5Q3 323 aaPredicted RBP21.75■■□□□ 1.07
PDLIM5-205ENST00000380180 DNAJC25-GNG10A0A024R161 153 aa21.74■■□□□ 1.07
PDLIM5-205ENST00000380180 CTIFO43310 598 aaKnown RBP21.74■■□□□ 1.07
PDLIM5-205ENST00000380180 DGAT1O75907 488 aa21.74■■□□□ 1.07
PDLIM5-205ENST00000380180 ATP4AP20648 1035 aa21.74■■□□□ 1.07
PDLIM5-205ENST00000380180 CASQ1P31415 396 aa21.74■■□□□ 1.07
PDLIM5-205ENST00000380180 ARHGAP25P42331 645 aa21.74■■□□□ 1.07
PDLIM5-205ENST00000380180 SOX10P56693 466 aa21.74■■□□□ 1.07
PDLIM5-205ENST00000380180 XKR3Q5GH77 459 aa21.74■■□□□ 1.07
PDLIM5-205ENST00000380180 L2HGDHQ9H9P8 463 aa21.74■■□□□ 1.07
PDLIM5-205ENST00000380180 PLXNA1Q9UIW2 1896 aa21.74■■□□□ 1.07
PDLIM5-205ENST00000380180 CCDC169A6NNP5 214 aa21.73■■□□□ 1.07
PDLIM5-205ENST00000380180 TISP43B9A030 160 aa21.73■■□□□ 1.07
PDLIM5-205ENST00000380180 FARP2O94887 1054 aaPredicted RBP21.73■■□□□ 1.07
PDLIM5-205ENST00000380180 TGFB3P10600 412 aa21.73■■□□□ 1.07
PDLIM5-205ENST00000380180 SLC9A1P19634 815 aa21.73■■□□□ 1.07
PDLIM5-205ENST00000380180 NPTX2P47972 431 aa21.73■■□□□ 1.07
PDLIM5-205ENST00000380180 DPY19L2P1Q6NXN4 242 aa21.73■■□□□ 1.07
PDLIM5-205ENST00000380180 SLC17A8Q8NDX2 589 aa21.73■■□□□ 1.07
PDLIM5-205ENST00000380180 KIFAP3Q92845 792 aa21.73■■□□□ 1.07
PDLIM5-205ENST00000380180 MS4A4AQ96JQ5 239 aa21.73■■□□□ 1.07
PDLIM5-205ENST00000380180 PNMA3Q9UL41 463 aa21.73■■□□□ 1.07
PDLIM5-205ENST00000380180 EIF3CLB5ME19 914 aaKnown RBP21.73■■□□□ 1.07
PDLIM5-205ENST00000380180 EXOC3O60645 756 aa21.73■■□□□ 1.07
PDLIM5-205ENST00000380180 SMTNP53814 917 aa21.73■■□□□ 1.07
PDLIM5-205ENST00000380180 KRT83P78385 493 aa21.73■■□□□ 1.07
PDLIM5-205ENST00000380180 MKRN3Q13064 507 aaKnown RBP21.73■■□□□ 1.07
PDLIM5-205ENST00000380180 DMP1Q13316 513 aaPredicted RBP21.73■■□□□ 1.07
PDLIM5-205ENST00000380180 MYBPC2Q14324 1141 aa21.73■■□□□ 1.07
PDLIM5-205ENST00000380180 NEDD9Q14511 834 aa21.73■■□□□ 1.07
PDLIM5-205ENST00000380180 EXOC3L4Q17RC7 722 aa21.73■■□□□ 1.07
PDLIM5-205ENST00000380180 CCDC42Q96M95 316 aa21.73■■□□□ 1.07
PDLIM5-205ENST00000380180 MPHOSPH6Q99547 160 aaKnown RBP21.73■■□□□ 1.07
PDLIM5-205ENST00000380180 EIF3CQ99613 913 aaKnown RBP21.73■■□□□ 1.07
PDLIM5-205ENST00000380180 GANQ9H2C0 597 aa21.73■■□□□ 1.07
PDLIM5-205ENST00000380180 IGKV6D-21A0A0A0MT36 114 aa21.72■■□□□ 1.07
PDLIM5-205ENST00000380180 GSTTP1A0A1W2PQM5 241 aa21.72■■□□□ 1.07
PDLIM5-205ENST00000380180 KIF5CO60282 957 aa21.72■■□□□ 1.07
PDLIM5-205ENST00000380180 ACTN1P12814 892 aa21.72■■□□□ 1.07
PDLIM5-205ENST00000380180 PON1P27169 355 aa21.72■■□□□ 1.07
PDLIM5-205ENST00000380180 MTERF2Q49AM1 385 aa21.72■■□□□ 1.07
PDLIM5-205ENST00000380180 RDH13Q8NBN7 331 aa21.72■■□□□ 1.07
PDLIM5-205ENST00000380180 TMEM161BQ8NDZ6 487 aa21.72■■□□□ 1.07
PDLIM5-205ENST00000380180 BSNDQ8WZ55 320 aa21.72■■□□□ 1.07
PDLIM5-205ENST00000380180 NTPCRQ9BSD7 190 aaKnown RBP21.72■■□□□ 1.07
PDLIM5-205ENST00000380180 NUCKS1Q9H1E3 243 aaKnown RBP21.72■■□□□ 1.07
PDLIM5-205ENST00000380180 PORCNQ9H237 461 aa21.72■■□□□ 1.07
PDLIM5-205ENST00000380180 PCIF1Q9H4Z3 704 aa21.72■■□□□ 1.07
PDLIM5-205ENST00000380180 RRAGCQ9HB90 399 aa21.72■■□□□ 1.07
PDLIM5-205ENST00000380180 XPNPEP1Q9NQW7 623 aa21.72■■□□□ 1.07
PDLIM5-205ENST00000380180 CETPP11597 493 aa21.72■■□□□ 1.07
PDLIM5-205ENST00000380180 LY6KQ17RY6 165 aa21.72■■□□□ 1.07
PDLIM5-205ENST00000380180 GPIHBP1Q8IV16 184 aa21.72■■□□□ 1.07
PDLIM5-205ENST00000380180 MCPH1Q8NEM0 835 aa21.72■■□□□ 1.07
PDLIM5-205ENST00000380180 TMEM174Q8WUU8 243 aa21.72■■□□□ 1.07
PDLIM5-205ENST00000380180 C17orf75Q9HAS0 396 aa21.72■■□□□ 1.07
PDLIM5-205ENST00000380180 PLCB1Q9NQ66 1216 aa21.72■■□□□ 1.07
PDLIM5-205ENST00000380180 CGNQ9P2M7 1197 aaKnown RBP21.72■■□□□ 1.07
PDLIM5-205ENST00000380180 PDHXO00330 501 aa21.71■■□□□ 1.07
PDLIM5-205ENST00000380180 URI1O94763 535 aaPredicted RBP21.71■■□□□ 1.07
PDLIM5-205ENST00000380180 GBP6Q6ZN66 633 aa21.71■■□□□ 1.07
PDLIM5-205ENST00000380180 SHCBP1Q8NEM2 672 aa21.71■■□□□ 1.07
PDLIM5-205ENST00000380180 SYN2Q92777 582 aaPredicted RBP21.71■■□□□ 1.07
PDLIM5-205ENST00000380180 KIFC3Q9BVG8 833 aa21.71■■□□□ 1.07
PDLIM5-205ENST00000380180 EFCC1Q9HA90 598 aa21.71■■□□□ 1.07
PDLIM5-205ENST00000380180 ATP6V0A4Q9HBG4 840 aa21.71■■□□□ 1.07
PDLIM5-205ENST00000380180 GBA2Q9HCG7 927 aaPredicted RBP21.71■■□□□ 1.07
PDLIM5-205ENST00000380180 KMT5AQ9NQR1 393 aa21.71■■□□□ 1.07
PDLIM5-205ENST00000380180 TBX20Q9UMR3 447 aa21.71■■□□□ 1.07
PDLIM5-205ENST00000380180 PLXNB2O15031 1838 aa21.71■■□□□ 1.07
PDLIM5-205ENST00000380180 GGPS1O95749 300 aa21.7■■□□□ 1.06
PDLIM5-205ENST00000380180 OATP04181 439 aa21.7■■□□□ 1.06
PDLIM5-205ENST00000380180 EIF4A3P38919 411 aaKnown RBP21.7■■□□□ 1.06
PDLIM5-205ENST00000380180 GTF2A2P52657 109 aa21.7■■□□□ 1.06
PDLIM5-205ENST00000380180 ZNF569Q5MCW4 686 aa21.7■■□□□ 1.06
PDLIM5-205ENST00000380180 SFMBT2Q5VUG0 894 aa21.7■■□□□ 1.06
PDLIM5-205ENST00000380180 C12orf56Q8IXR9 622 aa21.7■■□□□ 1.06
PDLIM5-205ENST00000380180 SPIRE2Q8WWL2 714 aa21.7■■□□□ 1.06
PDLIM5-205ENST00000380180 PCYT2Q99447 389 aa21.7■■□□□ 1.06
PDLIM5-205ENST00000380180 CBWD1Q9BRT8 395 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms