RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 ERP27Q96DN0 273 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 DNAAF2Q9NVR5 837 aaKnown RBP7.81□□□□□ -1.16
DDX58-202ENST00000379883 ARMCX3Q9UH62 379 aaPredicted RBP7.81□□□□□ -1.16
DDX58-202ENST00000379883 ITGB1BP2Q9UKP3 347 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 LMO7Q8WWI1 1683 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 A0A087X0T9 212 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 MIF4GDA9UHW6 222 aaKnown RBP7.81□□□□□ -1.16
DDX58-202ENST00000379883 CCDC22O60826 627 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 FAM228BP0C875 321 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 SLC34A1Q06495 639 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 LRRC14Q15048 493 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 RNF220Q5VTB9 566 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 CCDC62Q6P9F0 684 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 GPIHBP1Q8IV16 184 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 FITM2Q8N6M3 262 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 GDAP1Q8TB36 358 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 ATP8B4Q8TF62 1192 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 ZNF653Q96CK0 615 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 NT5C3AQ9H0P0 336 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 PNMA3Q9UL41 463 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 PHF24Q9UPV7 400 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 DIP2BQ9P265 1576 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 GSG1L2A8MUP6 293 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 HGSO14964 777 aaPredicted RBP7.81□□□□□ -1.16
DDX58-202ENST00000379883 PHF2O75151 1096 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 PEX11AO75192 247 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 PLEKHA8P1O95397 391 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 PCCAP05165 728 aaPredicted RBP7.81□□□□□ -1.16
DDX58-202ENST00000379883 ZFXP17010 805 aaPredicted RBP7.81□□□□□ -1.16
DDX58-202ENST00000379883 CAV1Q03135 178 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 MAPK7Q13164 816 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 PUM3Q15397 648 aaKnown RBP7.81□□□□□ -1.16
DDX58-202ENST00000379883 PI16Q6UXB8 463 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 CCDC105Q8IYK2 499 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 CELF4Q9BZC1 486 aaKnown RBP7.81□□□□□ -1.16
DDX58-202ENST00000379883 SEMA6BQ9H3T3 888 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 SYNCQ9H7C4 482 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 SAR1AQ9NR31 198 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 ZNF212Q9UDV6 495 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 STARD13Q9Y3M8 1113 aa7.81□□□□□ -1.16
DDX58-202ENST00000379883 BHMG1C9JSJ3 638 aaPredicted RBP7.8□□□□□ -1.16
DDX58-202ENST00000379883 TTLL1O95922 423 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 SHBGP04278 402 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 FCER1AP12319 257 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 ITGA6P23229 1130 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 YY1P25490 414 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 TMED1Q13445 227 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 SNX30Q5VWJ9 437 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 KRT79Q5XKE5 535 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 CCDC65Q8IXS2 484 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 ZNF333Q96JL9 665 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 ZBTB3Q9H5J0 574 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 THEGQ9P2T0 379 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 ZFP69BQ9UJL9 534 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 MROH7Q68CQ1 1323 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 EPHB6O15197 1021 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 RIPK2O43353 540 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 MAN1A1P33908 653 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 NT5C2P49902 561 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 IRX4P78413 519 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 KCNMA1Q12791 1236 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 AUHQ13825 339 aaKnown RBP7.8□□□□□ -1.16
DDX58-202ENST00000379883 PLS1Q14651 629 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 PPP4R3CPQ6ZMV5 832 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 FAM13CQ8NE31 585 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 ARHGEF10LQ9HCE6 1279 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 DBR1Q9UK59 544 aaKnown RBP7.8□□□□□ -1.16
DDX58-202ENST00000379883 MYO5AQ9Y4I1 1855 aaKnown RBP7.8□□□□□ -1.16
DDX58-202ENST00000379883 MAGEB6P1A0A0J9YX57 407 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 GSTTP1A0A1W2PQM5 241 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 GNA11P29992 359 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 SPARCL1Q14515 664 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 TMEM259Q4ZIN3 620 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 CCDC92Q53HC0 331 aaPredicted RBP7.8□□□□□ -1.16
DDX58-202ENST00000379883 NAALADL2Q58DX5 795 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 BBOF1Q8ND07 529 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 UHMK1Q8TAS1 419 aaKnown RBP7.8□□□□□ -1.16
DDX58-202ENST00000379883 EPS8L3Q8TE67 593 aaKnown RBP7.8□□□□□ -1.16
DDX58-202ENST00000379883 U2AF1L4Q8WU68 220 aaKnown RBP7.8□□□□□ -1.16
DDX58-202ENST00000379883 SCG3Q8WXD2 468 aaKnown RBP7.8□□□□□ -1.16
DDX58-202ENST00000379883 TXLNGYQ9BZA5 131 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 EPB41L4AQ9HCS5 686 aaPredicted RBP7.8□□□□□ -1.16
DDX58-202ENST00000379883 C6orf50Q9HD87 102 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 GALNT8Q9NY28 637 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.8□□□□□ -1.16
DDX58-202ENST00000379883 ABCF2Q9UG63 623 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 USP20Q9Y2K6 914 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 TBX22Q9Y458 520 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 TJP3O95049 919 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 KRT18P05783 430 aaKnown RBP7.8□□□□□ -1.16
DDX58-202ENST00000379883 AP1B1Q10567 949 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 NONOQ15233 471 aaKnown RBP eCLIP7.8□□□□□ -1.16
DDX58-202ENST00000379883 IL17AQ16552 155 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 KLC3Q6P597 504 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 LMOD2Q6P5Q4 547 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 ZNF449Q6P9G9 518 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 MAEAQ7L5Y9 396 aa7.8□□□□□ -1.16
DDX58-202ENST00000379883 ENAHQ8N8S7 591 aaPredicted RBP7.8□□□□□ -1.16
DDX58-202ENST00000379883 LARP4BQ92615 738 aaKnown RBP7.8□□□□□ -1.16
DDX58-202ENST00000379883 CATSPER2Q96P56 530 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms