RNA–Protein interactions for RNA: ENST00000378565.9

ITM2B-202, Transcript of integral membrane protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2B, Length 10,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-202ENST00000378565 SNRNP27Q8WVK2 155 aaKnown RBP12.11□□□□□ -0.47
ITM2B-202ENST00000378565 GCOM2Q9BZD3 368 aaPredicted RBP12.11□□□□□ -0.47
ITM2B-202ENST00000378565 RUBCNLQ9H714 662 aa12.11□□□□□ -0.47
ITM2B-202ENST00000378565 SUGT1Q9Y2Z0 365 aa12.11□□□□□ -0.47
ITM2B-202ENST00000378565 FOXP2O15409 715 aa12.11□□□□□ -0.47
ITM2B-202ENST00000378565 LSP1P33241 339 aa12.11□□□□□ -0.47
ITM2B-202ENST00000378565 MRPS25P82663 173 aaKnown RBP12.11□□□□□ -0.47
ITM2B-202ENST00000378565 CPXCR1Q8N123 301 aa12.11□□□□□ -0.47
ITM2B-202ENST00000378565 OSBPL5Q9H0X9 879 aaPredicted RBP12.11□□□□□ -0.47
ITM2B-202ENST00000378565 PI4K2BG5E9Z4 385 aa12.11□□□□□ -0.47
ITM2B-202ENST00000378565 TOMM70O94826 608 aa12.11□□□□□ -0.47
ITM2B-202ENST00000378565 ENO1P06733 434 aaKnown RBP12.11□□□□□ -0.47
ITM2B-202ENST00000378565 USP14P54578 494 aa12.11□□□□□ -0.47
ITM2B-202ENST00000378565 CDC37Q16543 378 aaPredicted RBP12.11□□□□□ -0.47
ITM2B-202ENST00000378565 NOP9Q86U38 636 aaKnown RBP12.11□□□□□ -0.47
ITM2B-202ENST00000378565 ARHGEF1Q92888 912 aaKnown RBP12.11□□□□□ -0.47
ITM2B-202ENST00000378565 PARP3Q9Y6F1 533 aa12.11□□□□□ -0.47
ITM2B-202ENST00000378565 MAST1Q9Y2H9 1570 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 ALDH18A1P54886 795 aaKnown RBP12.1□□□□□ -0.47
ITM2B-202ENST00000378565 ZNF473Q8WTR7 871 aaKnown RBP12.1□□□□□ -0.47
ITM2B-202ENST00000378565 DCAF5Q96JK2 942 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 TEKT3Q9BXF9 490 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 SEL1LQ9UBV2 794 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 CPSF3Q9UKF6 684 aaKnown RBP12.1□□□□□ -0.47
ITM2B-202ENST00000378565 TESPA1A2RU30 521 aaPredicted RBP12.1□□□□□ -0.47
ITM2B-202ENST00000378565 DMPKQ09013 629 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 PNMA1Q8ND90 353 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 TRIM63Q969Q1 353 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 CMTM5Q96DZ9 223 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 SLC12A6Q9UHW9 1150 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 NFRKBQ6P4R8 1299 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 FSD1LQ9BXM9 530 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 SLITRK6Q9H5Y7 841 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 YTHDC2Q9H6S0 1430 aaKnown RBP12.1□□□□□ -0.47
ITM2B-202ENST00000378565 UFL1O94874 794 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 KRT16P08779 473 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 RBM17Q96I25 401 aaKnown RBP12.1□□□□□ -0.47
ITM2B-202ENST00000378565 EIF4G3O43432 1585 aaKnown RBP12.1□□□□□ -0.47
ITM2B-202ENST00000378565 NSMFQ6X4W1 530 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 OPTNQ96CV9 577 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 RNF26Q9BY78 433 aaPredicted RBP12.1□□□□□ -0.47
ITM2B-202ENST00000378565 PSD3Q9NYI0 1048 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 CHMP2BQ9UQN3 213 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 PRG3Q9Y2Y8 225 aaPredicted RBP12.1□□□□□ -0.47
ITM2B-202ENST00000378565 SNX24Q9Y343 169 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 ABCA5Q8WWZ7 1642 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 NINQ8N4C6 2090 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 PRAMEP78395 509 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 TBC1D9BQ66K14 1250 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 TEKT4Q8WW24 435 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 FAM89AQ96GI7 184 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 KDM4CQ9H3R0 1056 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 SMG5Q9UPR3 1016 aaKnown RBP12.1□□□□□ -0.47
ITM2B-202ENST00000378565 PCDH11XQ9BZA7 1347 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 PCDH11YQ9BZA8 1340 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 ZNF263O14978 683 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 TTC13Q8NBP0 860 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 C19orf60Q96EN9 201 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 TMEM206Q9H813 350 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 E7ENQ6 273 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 SOX6P35712 828 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 VHLP40337 213 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.1□□□□□ -0.47
ITM2B-202ENST00000378565 GOLPH3LQ9H4A5 285 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 NPHS2Q9NP85 383 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 NDUFA13Q9P0J0 144 aa12.1□□□□□ -0.47
ITM2B-202ENST00000378565 AKAP10O43572 662 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 NLRP11P59045 1033 aaKnown RBP12.09□□□□□ -0.47
ITM2B-202ENST00000378565 GPS1Q13098 491 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 CHAMP1Q96JM3 812 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 SH3TC1Q8TE82 1336 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 PPP6R3Q5H9R7 873 aaPredicted RBP12.09□□□□□ -0.47
ITM2B-202ENST00000378565 ABHD8Q96I13 439 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 DONSONQ9NYP3 566 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 GOLGA8IPA6NC78 632 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 KLRF2D3W0D1 207 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 GOLGA8MH3BSY2 632 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 FMNL1O95466 1100 aaPredicted RBP12.09□□□□□ -0.47
ITM2B-202ENST00000378565 POLR2MP0CAP2 368 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 HIF1AQ16665 826 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 CDH24Q86UP0 819 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 CCNYL1Q8N7R7 359 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 TGFBRAP1Q8WUH2 860 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 KLHL31Q9H511 634 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 TNKSO95271 1327 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 RAPGEF3O95398 923 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 IMPDH2P12268 514 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 ATP1A3P13637 1013 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 DHX34Q14147 1143 aaKnown RBP12.09□□□□□ -0.47
ITM2B-202ENST00000378565 KRT27Q7Z3Y8 459 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 SEC16BQ96JE7 1060 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 ACCSQ96QU6 501 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 CEP72Q9P209 647 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 ADAMTS1Q9UHI8 967 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 SNUPNO95149 360 aaKnown RBP12.09□□□□□ -0.47
ITM2B-202ENST00000378565 BYSLQ13895 437 aaKnown RBP12.09□□□□□ -0.47
ITM2B-202ENST00000378565 GRAMD1CQ8IYS0 662 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 RCOR1Q9UKL0 485 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 A0A087WWV3 80 aa12.09□□□□□ -0.47
ITM2B-202ENST00000378565 ADAMTS2O95450 1211 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms