RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 SSC5DA1L4H1 1573 aa22.09■■□□□ 1.13
VSX1-202ENST00000376709 EXOC3O60645 756 aa22.08■■□□□ 1.13
VSX1-202ENST00000376709 PPP1R37O75864 691 aa22.08■■□□□ 1.13
VSX1-202ENST00000376709 KLRC1P26715 233 aa22.08■■□□□ 1.13
VSX1-202ENST00000376709 CXCR5P32302 372 aa22.08■■□□□ 1.13
VSX1-202ENST00000376709 FMO5P49326 533 aa22.08■■□□□ 1.13
VSX1-202ENST00000376709 HMGCS2P54868 508 aa22.08■■□□□ 1.13
VSX1-202ENST00000376709 TRMT1LQ7Z2T5 733 aaKnown RBP22.08■■□□□ 1.13
VSX1-202ENST00000376709 HDXQ7Z353 690 aa22.08■■□□□ 1.13
VSX1-202ENST00000376709 ZNF571Q7Z3V5 609 aaPredicted RBP22.08■■□□□ 1.13
VSX1-202ENST00000376709 DMAC2Q9NW81 257 aa22.08■■□□□ 1.13
VSX1-202ENST00000376709 NCK2O43639 380 aa22.08■■□□□ 1.12
VSX1-202ENST00000376709 MCM3P25205 808 aa22.08■■□□□ 1.12
VSX1-202ENST00000376709 CCDC181Q5TID7 509 aa22.08■■□□□ 1.12
VSX1-202ENST00000376709 SH2D3AQ9BRG2 576 aa22.08■■□□□ 1.12
VSX1-202ENST00000376709 STRA6Q9BX79 667 aa22.08■■□□□ 1.12
VSX1-202ENST00000376709 RIPK3Q9Y572 518 aa22.08■■□□□ 1.12
VSX1-202ENST00000376709 JAM2P57087 298 aa22.07■■□□□ 1.12
VSX1-202ENST00000376709 C2orf54Q08AI8 447 aa22.07■■□□□ 1.12
VSX1-202ENST00000376709 PRKG1Q13976 671 aa22.07■■□□□ 1.12
VSX1-202ENST00000376709 BAATQ14032 418 aaPredicted RBP22.07■■□□□ 1.12
VSX1-202ENST00000376709 C10orf76Q5T2E6 689 aa22.07■■□□□ 1.12
VSX1-202ENST00000376709 GJB7Q6PEY0 223 aa22.07■■□□□ 1.12
VSX1-202ENST00000376709 KLRG1Q96E93 195 aa22.07■■□□□ 1.12
VSX1-202ENST00000376709 PACSIN1Q9BY11 444 aa22.07■■□□□ 1.12
VSX1-202ENST00000376709 TSKSQ9UJT2 592 aa22.07■■□□□ 1.12
VSX1-202ENST00000376709 AJAP1Q9UKB5 411 aaPredicted RBP22.07■■□□□ 1.12
VSX1-202ENST00000376709 COL11A1P12107 1806 aaPredicted RBP22.07■■□□□ 1.12
VSX1-202ENST00000376709 WDR64B1ANS9 1081 aa22.06■■□□□ 1.12
VSX1-202ENST00000376709 ATP9AO75110 1047 aa22.06■■□□□ 1.12
VSX1-202ENST00000376709 LYPLA2O95372 231 aa22.06■■□□□ 1.12
VSX1-202ENST00000376709 JAK3P52333 1124 aa22.06■■□□□ 1.12
VSX1-202ENST00000376709 ALCAMQ13740 583 aa22.06■■□□□ 1.12
VSX1-202ENST00000376709 SMC1AQ14683 1233 aaKnown RBP22.06■■□□□ 1.12
VSX1-202ENST00000376709 PPP2R5AQ15172 486 aa22.06■■□□□ 1.12
VSX1-202ENST00000376709 SNRNP48Q6IEG0 339 aaKnown RBP22.06■■□□□ 1.12
VSX1-202ENST00000376709 CCDC70Q6NSX1 233 aa22.06■■□□□ 1.12
VSX1-202ENST00000376709 VPS36Q86VN1 386 aa22.06■■□□□ 1.12
VSX1-202ENST00000376709 TMEM206Q9H813 350 aa22.06■■□□□ 1.12
VSX1-202ENST00000376709 PRDM4Q9UKN5 801 aa22.06■■□□□ 1.12
VSX1-202ENST00000376709 TARSL2A2RTX5 802 aaKnown RBP22.06■■□□□ 1.12
VSX1-202ENST00000376709 MAP2K7O14733 419 aa22.06■■□□□ 1.12
VSX1-202ENST00000376709 PALMO75781 387 aa22.06■■□□□ 1.12
VSX1-202ENST00000376709 TRIM49P0CI25 452 aa22.06■■□□□ 1.12
VSX1-202ENST00000376709 TRIM49CP0CI26 452 aa22.06■■□□□ 1.12
VSX1-202ENST00000376709 PLS3P13797 630 aa22.06■■□□□ 1.12
VSX1-202ENST00000376709 PRKCIP41743 596 aa22.06■■□□□ 1.12
VSX1-202ENST00000376709 UGCGQ16739 394 aa22.06■■□□□ 1.12
VSX1-202ENST00000376709 SLC9A9Q8IVB4 645 aa22.06■■□□□ 1.12
VSX1-202ENST00000376709 RDH13Q8NBN7 331 aa22.06■■□□□ 1.12
VSX1-202ENST00000376709 TLR10Q9BXR5 811 aa22.06■■□□□ 1.12
VSX1-202ENST00000376709 L1RE1Q9UN81 338 aa22.06■■□□□ 1.12
VSX1-202ENST00000376709 TMEM150BA6NC51 233 aa22.05■■□□□ 1.12
VSX1-202ENST00000376709 MAPTP10636 758 aaKnown RBP22.05■■□□□ 1.12
VSX1-202ENST00000376709 SFNP31947 248 aa22.05■■□□□ 1.12
VSX1-202ENST00000376709 PSMC5P62195 406 aa22.05■■□□□ 1.12
VSX1-202ENST00000376709 KRT76Q01546 638 aa22.05■■□□□ 1.12
VSX1-202ENST00000376709 BFSP1Q12934 665 aa22.05■■□□□ 1.12
VSX1-202ENST00000376709 C4orf19Q8IY42 314 aa22.05■■□□□ 1.12
VSX1-202ENST00000376709 UBXN6Q9BZV1 441 aa22.05■■□□□ 1.12
VSX1-202ENST00000376709 SUGCTQ9HAC7 445 aa22.05■■□□□ 1.12
VSX1-202ENST00000376709 PHIPQ8WWQ0 1821 aa22.05■■□□□ 1.12
VSX1-202ENST00000376709 DICER1Q9UPY3 1922 aaKnown RBP22.05■■□□□ 1.12
VSX1-202ENST00000376709 CBWD6Q4V339 395 aa22.05■■□□□ 1.12
VSX1-202ENST00000376709 CBWD3Q5JTY5 395 aa22.05■■□□□ 1.12
VSX1-202ENST00000376709 CBWD5Q5RIA9 395 aa22.05■■□□□ 1.12
VSX1-202ENST00000376709 DLK2Q6UY11 383 aa22.05■■□□□ 1.12
VSX1-202ENST00000376709 ZNF771Q7L3S4 317 aaPredicted RBP22.05■■□□□ 1.12
VSX1-202ENST00000376709 ACCSQ96QU6 501 aa22.05■■□□□ 1.12
VSX1-202ENST00000376709 BACH1O14867 736 aa22.04■■□□□ 1.12
VSX1-202ENST00000376709 CCNE2O96020 404 aa22.04■■□□□ 1.12
VSX1-202ENST00000376709 KRT13P13646 458 aa22.04■■□□□ 1.12
VSX1-202ENST00000376709 FERP16591 822 aa22.04■■□□□ 1.12
VSX1-202ENST00000376709 CCND2P30279 289 aa22.04■■□□□ 1.12
VSX1-202ENST00000376709 STAT1P42224 750 aa22.04■■□□□ 1.12
VSX1-202ENST00000376709 PAFAH1B1P43034 410 aa22.04■■□□□ 1.12
VSX1-202ENST00000376709 NAGPAQ9UK23 515 aa22.04■■□□□ 1.12
VSX1-202ENST00000376709 PPP2R3BQ9Y5P8 575 aa22.04■■□□□ 1.12
VSX1-202ENST00000376709 POLR3GO15318 223 aaPredicted RBP22.04■■□□□ 1.12
VSX1-202ENST00000376709 GFPT2O94808 682 aa22.04■■□□□ 1.12
VSX1-202ENST00000376709 DDNO94850 711 aaPredicted RBP22.04■■□□□ 1.12
VSX1-202ENST00000376709 ANXA13P27216 316 aa22.04■■□□□ 1.12
VSX1-202ENST00000376709 OAS2P29728 719 aaKnown RBP22.04■■□□□ 1.12
VSX1-202ENST00000376709 MYL7Q01449 175 aa22.04■■□□□ 1.12
VSX1-202ENST00000376709 ITIH3Q06033 890 aa22.04■■□□□ 1.12
VSX1-202ENST00000376709 MYBPC2Q14324 1141 aa22.04■■□□□ 1.12
VSX1-202ENST00000376709 XKR9Q5GH70 373 aa22.04■■□□□ 1.12
VSX1-202ENST00000376709 XRRA1Q6P2D8 792 aa22.04■■□□□ 1.12
VSX1-202ENST00000376709 ALKBH5Q6P6C2 394 aaKnown RBP22.04■■□□□ 1.12
VSX1-202ENST00000376709 ZNF572Q7Z3I7 529 aaPredicted RBP22.04■■□□□ 1.12
VSX1-202ENST00000376709 FHDC1Q9C0D6 1143 aaPredicted RBP22.04■■□□□ 1.12
VSX1-202ENST00000376709 PCIF1Q9H4Z3 704 aa22.04■■□□□ 1.12
VSX1-202ENST00000376709 PCDHGC5Q9Y5F6 944 aa22.04■■□□□ 1.12
VSX1-202ENST00000376709 FTCDO95954 541 aa22.03■■□□□ 1.12
VSX1-202ENST00000376709 MAP9Q49MG5 647 aa22.03■■□□□ 1.12
VSX1-202ENST00000376709 NLRX1Q86UT6 975 aa22.03■■□□□ 1.12
VSX1-202ENST00000376709 SPATA4Q8NEY3 305 aa22.03■■□□□ 1.12
VSX1-202ENST00000376709 C12orf42Q96LP6 360 aa22.03■■□□□ 1.12
VSX1-202ENST00000376709 TIPINQ9BVW5 301 aa22.03■■□□□ 1.12
VSX1-202ENST00000376709 SPON1Q9HCB6 807 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms