RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 RTN4Q9NQC3 1192 aaKnown RBP23.37■■□□□ 1.33
HLA-C-201ENST00000376228 SEL1LQ9UBV2 794 aa23.37■■□□□ 1.33
HLA-C-201ENST00000376228 MYH9P35579 1960 aaKnown RBP23.36■■□□□ 1.33
HLA-C-201ENST00000376228 KCNJ18B7U540 433 aa23.36■■□□□ 1.33
HLA-C-201ENST00000376228 PQBP1O60828 265 aaKnown RBP23.36■■□□□ 1.33
HLA-C-201ENST00000376228 FGFR1OPO95684 399 aaKnown RBP23.36■■□□□ 1.33
HLA-C-201ENST00000376228 TGFB3P10600 412 aa23.36■■□□□ 1.33
HLA-C-201ENST00000376228 ZNF131P52739 623 aa23.36■■□□□ 1.33
HLA-C-201ENST00000376228 KCNJ12Q14500 433 aa23.36■■□□□ 1.33
HLA-C-201ENST00000376228 HSP90AA4PQ58FG1 418 aa23.36■■□□□ 1.33
HLA-C-201ENST00000376228 TMC6Q7Z403 805 aa23.36■■□□□ 1.33
HLA-C-201ENST00000376228 CSGALNACT2Q8N6G5 542 aa23.36■■□□□ 1.33
HLA-C-201ENST00000376228 KCNF1Q9H3M0 494 aa23.36■■□□□ 1.33
HLA-C-201ENST00000376228 PRDM5Q9NQX1 630 aaPredicted RBP23.36■■□□□ 1.33
HLA-C-201ENST00000376228 ANKEF1Q9NU02 776 aa23.36■■□□□ 1.33
HLA-C-201ENST00000376228 SAMM50Q9Y512 469 aa23.36■■□□□ 1.33
HLA-C-201ENST00000376228 TLE2Q04725 743 aa23.35■■□□□ 1.33
HLA-C-201ENST00000376228 KRT31Q15323 416 aa23.35■■□□□ 1.33
HLA-C-201ENST00000376228 ZCWPW2Q504Y3 356 aa23.35■■□□□ 1.33
HLA-C-201ENST00000376228 C1orf53Q5VUE5 145 aa23.35■■□□□ 1.33
HLA-C-201ENST00000376228 EPM2AIP1Q7L775 607 aaPredicted RBP23.35■■□□□ 1.33
HLA-C-201ENST00000376228 TIPINQ9BVW5 301 aa23.35■■□□□ 1.33
HLA-C-201ENST00000376228 SLC9A2Q9UBY0 812 aa23.35■■□□□ 1.33
HLA-C-201ENST00000376228 ARHGEF35A5YM69 484 aa23.34■■□□□ 1.33
HLA-C-201ENST00000376228 TBCAO75347 108 aaKnown RBP23.34■■□□□ 1.33
HLA-C-201ENST00000376228 PBX1P40424 430 aa23.34■■□□□ 1.33
HLA-C-201ENST00000376228 COPB1P53618 953 aaKnown RBP23.34■■□□□ 1.33
HLA-C-201ENST00000376228 BMT2Q1RMZ1 405 aa23.34■■□□□ 1.33
HLA-C-201ENST00000376228 CCDC62Q6P9F0 684 aa23.34■■□□□ 1.33
HLA-C-201ENST00000376228 JPH1Q9HDC5 661 aaPredicted RBP23.34■■□□□ 1.33
HLA-C-201ENST00000376228 ZBTB39O15060 712 aa23.33■■□□□ 1.33
HLA-C-201ENST00000376228 NKRFO15226 690 aaKnown RBP eCLIP23.33■■□□□ 1.33
HLA-C-201ENST00000376228 ZNF500O60304 480 aaPredicted RBP23.33■■□□□ 1.33
HLA-C-201ENST00000376228 ZEB2O60315 1214 aa23.33■■□□□ 1.33
HLA-C-201ENST00000376228 ATG7O95352 703 aa23.33■■□□□ 1.33
HLA-C-201ENST00000376228 MAGEA10P43363 369 aaPredicted RBP23.33■■□□□ 1.33
HLA-C-201ENST00000376228 RARRES1P49788 294 aa23.33■■□□□ 1.33
HLA-C-201ENST00000376228 TBX2Q13207 712 aaPredicted RBP23.33■■□□□ 1.33
HLA-C-201ENST00000376228 PPP4R3CPQ6ZMV5 832 aa23.33■■□□□ 1.33
HLA-C-201ENST00000376228 FILIP1Q7Z7B0 1213 aa23.33■■□□□ 1.33
HLA-C-201ENST00000376228 LRRC8AQ8IWT6 810 aa23.33■■□□□ 1.33
HLA-C-201ENST00000376228 CCDC150Q8NCX0 1101 aa23.33■■□□□ 1.33
HLA-C-201ENST00000376228 SCFD1Q8WVM8 642 aa23.33■■□□□ 1.33
HLA-C-201ENST00000376228 TSG101Q99816 390 aa23.33■■□□□ 1.33
HLA-C-201ENST00000376228 SORBS3O60504 671 aa23.33■■□□□ 1.32
HLA-C-201ENST00000376228 PSAPP07602 524 aa23.33■■□□□ 1.32
HLA-C-201ENST00000376228 MYL3P08590 195 aa23.33■■□□□ 1.32
HLA-C-201ENST00000376228 CPT1AP50416 773 aa23.33■■□□□ 1.32
HLA-C-201ENST00000376228 CACNB1Q02641 598 aaPredicted RBP23.33■■□□□ 1.32
HLA-C-201ENST00000376228 KCNV1Q6PIU1 500 aa23.33■■□□□ 1.32
HLA-C-201ENST00000376228 ABHD15Q6UXT9 468 aa23.33■■□□□ 1.32
HLA-C-201ENST00000376228 SFR1Q86XK3 245 aa23.33■■□□□ 1.32
HLA-C-201ENST00000376228 CACTINQ8WUQ7 758 aaKnown RBP23.33■■□□□ 1.32
HLA-C-201ENST00000376228 PDLIM7Q9NR12 457 aa23.33■■□□□ 1.32
HLA-C-201ENST00000376228 MAGEC2Q9UBF1 373 aaPredicted RBP23.33■■□□□ 1.32
HLA-C-201ENST00000376228 A0A0U1RQG5 324 aaPredicted RBP23.32■■□□□ 1.32
HLA-C-201ENST00000376228 FAM13AO94988 1023 aa23.32■■□□□ 1.32
HLA-C-201ENST00000376228 YWHABP31946 246 aaKnown RBP23.32■■□□□ 1.32
HLA-C-201ENST00000376228 RAD51AP2Q09MP3 1159 aa23.32■■□□□ 1.32
HLA-C-201ENST00000376228 SPECC1LQ69YQ0 1117 aa23.32■■□□□ 1.32
HLA-C-201ENST00000376228 PADI6Q6TGC4 694 aa23.32■■□□□ 1.32
HLA-C-201ENST00000376228 ZC3H3Q8IXZ2 948 aaKnown RBP23.32■■□□□ 1.32
HLA-C-201ENST00000376228 GLIS3Q8NEA6 775 aa23.32■■□□□ 1.32
HLA-C-201ENST00000376228 ZNF507Q8TCN5 953 aa23.32■■□□□ 1.32
HLA-C-201ENST00000376228 ATP6V0A1Q93050 837 aa23.32■■□□□ 1.32
HLA-C-201ENST00000376228 ZNF830Q96NB3 372 aaPredicted RBP23.32■■□□□ 1.32
HLA-C-201ENST00000376228 KCTD10Q9H3F6 313 aa23.32■■□□□ 1.32
HLA-C-201ENST00000376228 PARVGQ9HBI0 331 aa23.32■■□□□ 1.32
HLA-C-201ENST00000376228 PRKAG2Q9UGJ0 569 aa23.32■■□□□ 1.32
HLA-C-201ENST00000376228 DDX41Q9UJV9 622 aaKnown RBP23.32■■□□□ 1.32
HLA-C-201ENST00000376228 ARID2Q68CP9 1835 aa23.32■■□□□ 1.32
HLA-C-201ENST00000376228 ITIH6Q6UXX5 1313 aa23.31■■□□□ 1.32
HLA-C-201ENST00000376228 EIF3DO15371 548 aaKnown RBP eCLIP23.31■■□□□ 1.32
HLA-C-201ENST00000376228 UGCGQ16739 394 aa23.31■■□□□ 1.32
HLA-C-201ENST00000376228 EDRF1Q3B7T1 1238 aa23.31■■□□□ 1.32
HLA-C-201ENST00000376228 HABP4Q5JVS0 413 aaKnown RBP23.31■■□□□ 1.32
HLA-C-201ENST00000376228 PRO3102Q9H379 93 aa23.31■■□□□ 1.32
HLA-C-201ENST00000376228 UBE4BO95155 1302 aa23.31■■□□□ 1.32
HLA-C-201ENST00000376228 TRIM43BA6NCK2 446 aa23.3■■□□□ 1.32
HLA-C-201ENST00000376228 RSPH10B2B2RC85 870 aa23.3■■□□□ 1.32
HLA-C-201ENST00000376228 ARVCFO00192 962 aa23.3■■□□□ 1.32
HLA-C-201ENST00000376228 GH1P01241 217 aa23.3■■□□□ 1.32
HLA-C-201ENST00000376228 RSPH10BP0C881 870 aa23.3■■□□□ 1.32
HLA-C-201ENST00000376228 MAPTP10636 758 aaKnown RBP23.3■■□□□ 1.32
HLA-C-201ENST00000376228 ACTR2P61160 394 aa23.3■■□□□ 1.32
HLA-C-201ENST00000376228 FKBP3Q00688 224 aaKnown RBP23.3■■□□□ 1.32
HLA-C-201ENST00000376228 SP2Q02086 613 aa23.3■■□□□ 1.32
HLA-C-201ENST00000376228 ARHGAP1Q07960 439 aa23.3■■□□□ 1.32
HLA-C-201ENST00000376228 NEDD9Q14511 834 aa23.3■■□□□ 1.32
HLA-C-201ENST00000376228 LRRC55Q6ZSA7 311 aa23.3■■□□□ 1.32
HLA-C-201ENST00000376228 PPP1R13LQ8WUF5 828 aa23.3■■□□□ 1.32
HLA-C-201ENST00000376228 AFG1LQ8WV93 481 aa23.3■■□□□ 1.32
HLA-C-201ENST00000376228 TRIM43Q96BQ3 446 aaPredicted RBP23.3■■□□□ 1.32
HLA-C-201ENST00000376228 CEP63Q96MT8 703 aa23.3■■□□□ 1.32
HLA-C-201ENST00000376228 GDF15Q99988 308 aa23.3■■□□□ 1.32
HLA-C-201ENST00000376228 FGFBP2Q9BYJ0 223 aa23.3■■□□□ 1.32
HLA-C-201ENST00000376228 ZHX3Q9H4I2 956 aa23.3■■□□□ 1.32
HLA-C-201ENST00000376228 TRAF3IP3Q9Y228 551 aa23.3■■□□□ 1.32
HLA-C-201ENST00000376228 LAMA3Q16787 3333 aa23.3■■□□□ 1.32
HLA-C-201ENST00000376228 N4BP3O15049 544 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms