RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 CUL1Q13616 776 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 RPUSD2Q8IZ73 545 aaKnown RBP14.64□□□□□ -0.07
C9orf47-203ENST00000375851 CCHCR1Q8TD31 782 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 KCNB2Q92953 911 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 CAPN11Q9UMQ6 739 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 A0A1B0GTH6 734 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 PDXKO00764 312 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 RASGRF2O14827 1237 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 SUN1O94901 812 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 TBK1Q9UHD2 729 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 PRR12Q9ULL5 1215 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 NOVA2Q9UNW9 492 aaKnown RBP14.64□□□□□ -0.07
C9orf47-203ENST00000375851 RHOBTB3O94955 611 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 PPP4CP60510 307 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 NAA30Q147X3 362 aaPredicted RBP14.64□□□□□ -0.07
C9orf47-203ENST00000375851 RPS6KA2Q15349 733 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 ZKSCAN8Q15776 578 aaPredicted RBP14.64□□□□□ -0.07
C9orf47-203ENST00000375851 TSNAXIP1Q2TAA8 658 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 BBS9Q3SYG4 887 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 GLE1Q53GS7 698 aaKnown RBP14.64□□□□□ -0.07
C9orf47-203ENST00000375851 ZNF746Q6NUN9 644 aaPredicted RBP14.64□□□□□ -0.07
C9orf47-203ENST00000375851 PASD1Q8IV76 773 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 DNAAF3Q8N9W5 541 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 C11orf70Q9BRQ4 267 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 ZMYND12Q9H0C1 365 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 INTS2Q9H0H0 1204 aaKnown RBP14.64□□□□□ -0.07
C9orf47-203ENST00000375851 CCDC68Q9H2F9 335 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 TMEM60Q9H2L4 133 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 RNF181Q9P0P0 153 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 PREX1Q8TCU6 1659 aa14.64□□□□□ -0.07
C9orf47-203ENST00000375851 A0A1B0GUA9 196 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 PSMA2P25787 234 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 GARSP41250 739 aaKnown RBP14.63□□□□□ -0.07
C9orf47-203ENST00000375851 PHKA2P46019 1235 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 PRPSAP1Q14558 356 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 LMNTD2Q8IXW0 634 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 MAP3K14Q99558 947 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 C7orf25Q9BPX7 421 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 TUFT1Q9NNX1 390 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 SNX24Q9Y343 169 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 CPP00450 1065 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 ZNF18P17022 549 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 MSH2P43246 934 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 MTMR2Q13614 643 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 ZNF668Q96K58 619 aaPredicted RBP14.63□□□□□ -0.07
C9orf47-203ENST00000375851 SH2D3AQ9BRG2 576 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 MEGF6O75095 1541 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 CDO1Q16878 200 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 ZNF699Q32M78 642 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 FRMD5Q7Z6J6 570 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 GLYCTKQ8IVS8 523 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 CERKQ8TCT0 537 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 CFAP57Q96MR6 1250 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 POLR3FQ9H1D9 316 aaPredicted RBP14.63□□□□□ -0.07
C9orf47-203ENST00000375851 DNAJC17Q9NVM6 304 aaKnown RBP14.63□□□□□ -0.07
C9orf47-203ENST00000375851 NPHP3-ACAD11A0A0J9YXS1 232 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 IFT88Q13099 833 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 TMED2Q15363 201 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 NFRKBQ6P4R8 1299 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 ZWILCHQ9H900 591 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 DIS3Q9Y2L1 958 aaKnown RBP14.63□□□□□ -0.07
C9orf47-203ENST00000375851 TACC3Q9Y6A5 838 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 EMSYQ7Z589 1322 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 SYNGAP1Q96PV0 1343 aa14.63□□□□□ -0.07
C9orf47-203ENST00000375851 MYMKA6NI61 221 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 PODXLO00592 558 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 TTLL4Q14679 1199 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 COG2Q14746 738 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 ARHGEF6Q15052 776 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 ARHGEF18Q6ZSZ5 1173 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 CYFIP1Q7L576 1253 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 MICALL2Q8IY33 904 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 PDIK1LQ8N165 341 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 C2orf69Q8N8R5 385 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 CCDC197Q8NCU1 140 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 FAM151AQ8WW52 585 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 OSBPL9Q96SU4 736 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 JMJD4Q9H9V9 463 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 TOPORSQ9NS56 1045 aaPredicted RBP14.62□□□□□ -0.07
C9orf47-203ENST00000375851 HDAC6Q9UBN7 1215 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 ZNF70Q9UC06 446 aaPredicted RBP14.62□□□□□ -0.07
C9orf47-203ENST00000375851 CNOT7Q9UIV1 285 aaKnown RBP14.62□□□□□ -0.07
C9orf47-203ENST00000375851 SALL3Q9BXA9 1300 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 FTLP02792 175 aaPredicted RBP14.62□□□□□ -0.07
C9orf47-203ENST00000375851 NXNQ6DKJ4 435 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 RHPN2Q8IUC4 686 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 LPAR1Q92633 364 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 EXOC4Q96A65 974 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 CHP1Q99653 195 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 ARHGAP42A6NI28 874 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 NCK2O43639 380 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 EIF3BP55884 814 aaKnown RBP14.62□□□□□ -0.07
C9orf47-203ENST00000375851 GRIN1Q05586 938 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 PDXDC1Q6P996 788 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 HEMGNQ9BXL5 484 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 VCX3BQ9H321 246 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 VCPKMTQ9H867 229 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 EFCC1Q9HA90 598 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 EXOC1LA0A1B0GW35 172 aa14.62□□□□□ -0.07
C9orf47-203ENST00000375851 TBX3O15119 743 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms