RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 LXNQ9BS40 222 aa17.5■□□□□ 0.39
SDHB-201ENST00000375499 ST3GAL5Q9UNP4 418 aa17.5■□□□□ 0.39
SDHB-201ENST00000375499 ADGRA3Q8IWK6 1321 aa17.49■□□□□ 0.39
SDHB-201ENST00000375499 DDX11L8A8MPP1 907 aa17.49■□□□□ 0.39
SDHB-201ENST00000375499 NEMFO60524 1076 aa17.49■□□□□ 0.39
SDHB-201ENST00000375499 IBSPP21815 317 aaPredicted RBP17.49■□□□□ 0.39
SDHB-201ENST00000375499 QARSP47897 775 aaKnown RBP17.49■□□□□ 0.39
SDHB-201ENST00000375499 GPC3P51654 580 aa17.49■□□□□ 0.39
SDHB-201ENST00000375499 CYP4A11Q02928 519 aa17.49■□□□□ 0.39
SDHB-201ENST00000375499 CTTNQ14247 550 aaKnown RBP17.49■□□□□ 0.39
SDHB-201ENST00000375499 EPHA7Q15375 998 aa17.49■□□□□ 0.39
SDHB-201ENST00000375499 CALCRLQ16602 461 aa17.49■□□□□ 0.39
SDHB-201ENST00000375499 TMX3Q96JJ7 454 aa17.49■□□□□ 0.39
SDHB-201ENST00000375499 MTMR9Q96QG7 549 aa17.49■□□□□ 0.39
SDHB-201ENST00000375499 FTHL17Q9BXU8 183 aa17.49■□□□□ 0.39
SDHB-201ENST00000375499 UBE2ZQ9H832 354 aaPredicted RBP17.49■□□□□ 0.39
SDHB-201ENST00000375499 MYO7AQ13402 2215 aa17.49■□□□□ 0.39
SDHB-201ENST00000375499 POTEMA6NI47 508 aa17.48■□□□□ 0.39
SDHB-201ENST00000375499 CSDE1O75534 798 aaKnown RBP17.48■□□□□ 0.39
SDHB-201ENST00000375499 DGKIO75912 1065 aa17.48■□□□□ 0.39
SDHB-201ENST00000375499 P4HBP07237 508 aaKnown RBP17.48■□□□□ 0.39
SDHB-201ENST00000375499 FGFR4P22455 802 aa17.48■□□□□ 0.39
SDHB-201ENST00000375499 MCM7P33993 719 aa17.48■□□□□ 0.39
SDHB-201ENST00000375499 DSC3Q14574 896 aa17.48■□□□□ 0.39
SDHB-201ENST00000375499 NBR1Q14596 966 aa17.48■□□□□ 0.39
SDHB-201ENST00000375499 EPC2Q52LR7 807 aa17.48■□□□□ 0.39
SDHB-201ENST00000375499 SLFN12Q8IYM2 578 aa17.48■□□□□ 0.39
SDHB-201ENST00000375499 FBXO22Q8NEZ5 403 aa17.48■□□□□ 0.39
SDHB-201ENST00000375499 ADAM2Q99965 735 aa17.48■□□□□ 0.39
SDHB-201ENST00000375499 CYP26B1Q9NR63 512 aa17.48■□□□□ 0.39
SDHB-201ENST00000375499 BMP2KQ9NSY1 1161 aaPredicted RBP17.48■□□□□ 0.39
SDHB-201ENST00000375499 ST18O60284 1047 aa17.47■□□□□ 0.39
SDHB-201ENST00000375499 MARCH6O60337 910 aa17.47■□□□□ 0.39
SDHB-201ENST00000375499 MAFO75444 373 aaPredicted RBP17.47■□□□□ 0.39
SDHB-201ENST00000375499 TMOD1P28289 359 aa17.47■□□□□ 0.39
SDHB-201ENST00000375499 TXKP42681 527 aa17.47■□□□□ 0.39
SDHB-201ENST00000375499 SAFBQ15424 915 aaKnown RBP eCLIP17.47■□□□□ 0.39
SDHB-201ENST00000375499 NPAS4Q8IUM7 802 aa17.47■□□□□ 0.39
SDHB-201ENST00000375499 C4orf19Q8IY42 314 aa17.47■□□□□ 0.39
SDHB-201ENST00000375499 FAM184AQ8NB25 1140 aa17.47■□□□□ 0.39
SDHB-201ENST00000375499 KHSRPQ92945 711 aaKnown RBP eCLIP17.47■□□□□ 0.392e-6■■■■□ 20.9
SDHB-201ENST00000375499 EIF2AK1Q9BQI3 630 aaKnown RBP17.47■□□□□ 0.39
SDHB-201ENST00000375499 FOXP1Q9H334 677 aaPredicted RBP17.47■□□□□ 0.39
SDHB-201ENST00000375499 TTC12Q9H892 705 aaPredicted RBP17.47■□□□□ 0.39
SDHB-201ENST00000375499 FAM50BQ9Y247 325 aa17.47■□□□□ 0.39
SDHB-201ENST00000375499 C9IYK1 514 aa17.46■□□□□ 0.39
SDHB-201ENST00000375499 SLITRK3O94933 977 aa17.46■□□□□ 0.39
SDHB-201ENST00000375499 BAG4O95429 457 aaKnown RBP17.46■□□□□ 0.39
SDHB-201ENST00000375499 DARSP14868 501 aaKnown RBP17.46■□□□□ 0.39
SDHB-201ENST00000375499 EIF4BP23588 611 aaKnown RBP17.46■□□□□ 0.39
SDHB-201ENST00000375499 SARSP49591 514 aaKnown RBP17.46■□□□□ 0.39
SDHB-201ENST00000375499 PTPROQ16827 1216 aa17.46■□□□□ 0.39
SDHB-201ENST00000375499 PAN2Q504Q3 1202 aaKnown RBP17.46■□□□□ 0.39
SDHB-201ENST00000375499 KSR1Q8IVT5 923 aa17.46■□□□□ 0.39
SDHB-201ENST00000375499 TMEM192Q8IY95 271 aa17.46■□□□□ 0.39
SDHB-201ENST00000375499 FIBCD1Q8N539 461 aa17.46■□□□□ 0.39
SDHB-201ENST00000375499 SAMD11Q96NU1 681 aa17.46■□□□□ 0.39
SDHB-201ENST00000375499 UPF2Q9HAU5 1272 aaKnown RBP17.46■□□□□ 0.39
SDHB-201ENST00000375499 CD320Q9NPF0 282 aa17.46■□□□□ 0.39
SDHB-201ENST00000375499 HCSTQ9UBK5 93 aa17.46■□□□□ 0.39
SDHB-201ENST00000375499 PCDHA12Q9UN75 941 aa17.46■□□□□ 0.39
SDHB-201ENST00000375499 A0A087WWV3 80 aa17.45■□□□□ 0.38
SDHB-201ENST00000375499 GPR182O15218 404 aa17.45■□□□□ 0.38
SDHB-201ENST00000375499 YWHABP31946 246 aaKnown RBP17.45■□□□□ 0.38
SDHB-201ENST00000375499 ZNF174Q15697 407 aa17.45■□□□□ 0.38
SDHB-201ENST00000375499 CSPP1Q1MSJ5 1256 aa17.45■□□□□ 0.38
SDHB-201ENST00000375499 NOSTRINQ8IVI9 506 aa17.45■□□□□ 0.38
SDHB-201ENST00000375499 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.45■□□□□ 0.38
SDHB-201ENST00000375499 NLRP7Q8WX94 980 aa17.45■□□□□ 0.38
SDHB-201ENST00000375499 CEP170P1Q96L14 293 aa17.45■□□□□ 0.38
SDHB-201ENST00000375499 HSD17B14Q9BPX1 270 aa17.45■□□□□ 0.38
SDHB-201ENST00000375499 DHX33Q9H6R0 707 aaKnown RBP17.45■□□□□ 0.38
SDHB-201ENST00000375499 RGS18Q9NS28 235 aa17.45■□□□□ 0.38
SDHB-201ENST00000375499 MRPL42Q9Y6G3 142 aaKnown RBP17.45■□□□□ 0.38
SDHB-201ENST00000375499 A0A087WZ62 844 aa17.44■□□□□ 0.38
SDHB-201ENST00000375499 DENND3A2RUS2 1198 aa17.44■□□□□ 0.38
SDHB-201ENST00000375499 GRXCR2A6NFK2 248 aa17.44■□□□□ 0.38
SDHB-201ENST00000375499 CTNNB1P35222 781 aa17.44■□□□□ 0.38
SDHB-201ENST00000375499 TOB1P50616 345 aaPredicted RBP17.44■□□□□ 0.38
SDHB-201ENST00000375499 BTG3Q14201 252 aaPredicted RBP17.44■□□□□ 0.38
SDHB-201ENST00000375499 TTC38Q5R3I4 469 aa17.44■□□□□ 0.38
SDHB-201ENST00000375499 FAM102BQ5T8I3 360 aa17.44■□□□□ 0.38
SDHB-201ENST00000375499 ALYREFQ86V81 257 aaKnown RBP17.44■□□□□ 0.38
SDHB-201ENST00000375499 RHPN2Q8IUC4 686 aa17.44■□□□□ 0.38
SDHB-201ENST00000375499 TPH2Q8IWU9 490 aa17.44■□□□□ 0.38
SDHB-201ENST00000375499 CLP1Q92989 425 aaKnown RBP17.44■□□□□ 0.38
SDHB-201ENST00000375499 TMEM143Q96AN5 459 aa17.44■□□□□ 0.38
SDHB-201ENST00000375499 SCLT1Q96NL6 688 aa17.44■□□□□ 0.38
SDHB-201ENST00000375499 FDXACB1Q9BRP7 624 aaPredicted RBP17.44■□□□□ 0.38
SDHB-201ENST00000375499 ZSWIM4Q9H7M6 989 aa17.44■□□□□ 0.38
SDHB-201ENST00000375499 XPNPEP1Q9NQW7 623 aa17.44■□□□□ 0.38
SDHB-201ENST00000375499 RNF19AQ9NV58 838 aa17.44■□□□□ 0.38
SDHB-201ENST00000375499 SUCLA2Q9P2R7 463 aaPredicted RBP17.44■□□□□ 0.38
SDHB-201ENST00000375499 PRKAG3Q9UGI9 489 aa17.44■□□□□ 0.38
SDHB-201ENST00000375499 PLXNA4Q9HCM2 1894 aa17.44■□□□□ 0.38
SDHB-201ENST00000375499 FAM86C2PA6NEL3 165 aa17.43■□□□□ 0.38
SDHB-201ENST00000375499 H3BNC9 293 aa17.43■□□□□ 0.38
SDHB-201ENST00000375499 NCK2O43639 380 aa17.43■□□□□ 0.38
SDHB-201ENST00000375499 KCNA5P22460 613 aa17.43■□□□□ 0.38
SDHB-201ENST00000375499 U2AF2P26368 475 aaKnown RBP eCLIP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms