RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 RHOT1Q8IXI2 618 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 PKD2L2Q9NZM6 624 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 SLC7A3Q8WY07 619 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 CYTH2Q99418 400 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 ADAMTS1Q9UHI8 967 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 CACNA1FO60840 1977 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 ATL2Q8NHH9 583 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 POMGNT1Q8WZA1 660 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 CYFIP2Q96F07 1278 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 CARD9Q9H257 536 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 RANBP17Q9H2T7 1088 aaKnown RBP10.87□□□□□ -0.67
PTCH1-204ENST00000375290 CCDC87Q9NVE4 849 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 PLCG1P19174 1290 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 PFKFB3Q16875 520 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-204ENST00000375290 AIPL1Q9NZN9 384 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 NUB1Q9Y5A7 615 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 ADGRB3O60242 1522 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 LMTK2Q8IWU2 1503 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 A8MXQ7 604 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 KRT1P04264 644 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 ZNF677Q86XU0 584 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 CAVIN3Q969G5 261 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 CAPN9O14815 690 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 LIN7AO14910 233 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-204ENST00000375290 MAML1Q92585 1016 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 ABTB1Q969K4 478 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-204ENST00000375290 FAM212AQ96EL1 285 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 SCHIP1Q9P0W5 487 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-204ENST00000375290 TRAF3IP3Q9Y228 551 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 PCDHA1Q9Y5I3 950 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 ATP1A3P13637 1013 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 IL10P22301 178 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 MCPH1Q8NEM0 835 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 CEP70Q8NHQ1 597 aa10.87□□□□□ -0.67
PTCH1-204ENST00000375290 FNTAP49354 379 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 RIPPLY1Q0D2K3 151 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 CCDC137Q6PK04 289 aaKnown RBP10.86□□□□□ -0.67
PTCH1-204ENST00000375290 GIMAP8Q8ND71 665 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-204ENST00000375290 HIC2Q96JB3 615 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 GID8Q9NWU2 228 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 UGP2Q16851 508 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 ENO4A6NNW6 628 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 INPP5AQ14642 412 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 CCDC144BQ3MJ40 725 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 RAPH1Q70E73 1250 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 IP6K2Q9UHH9 426 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 IQCA1LA6NCM1 817 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 HSPA4LO95757 839 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 ABCE1P61221 599 aaKnown RBP10.86□□□□□ -0.67
PTCH1-204ENST00000375290 CROCCP3Q8IVE0 287 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 DEPDC1BQ8WUY9 529 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 HDAC11Q96DB2 347 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 SYCE1LA8MT33 242 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 PGBD1Q96JS3 809 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 ZFRQ96KR1 1074 aaKnown RBP10.86□□□□□ -0.67
PTCH1-204ENST00000375290 MYL10Q9BUA6 226 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 PARVBQ9HBI1 364 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 CDHR2Q9BYE9 1310 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 LRRC53A6NM62 1247 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 CHMP2AO43633 222 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 PHF2O75151 1096 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 PAPOLAP51003 745 aaKnown RBP10.86□□□□□ -0.67
PTCH1-204ENST00000375290 MECOMQ03112 1051 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 NRKQ7Z2Y5 1582 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 TTKP33981 857 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 MTHFD1LQ6UB35 978 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 ARMCX2Q7L311 632 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 COL23A1Q86Y22 540 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-204ENST00000375290 KCTD6Q8NC69 237 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 SEC16BQ96JE7 1060 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 SUCLA2Q9P2R7 463 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-204ENST00000375290 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-204ENST00000375290 PDS5AQ29RF7 1337 aaKnown RBP10.86□□□□□ -0.67
PTCH1-204ENST00000375290 M0QZ92 97 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 CENPCQ03188 943 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 EFL1Q7Z2Z2 1120 aaKnown RBP10.86□□□□□ -0.67
PTCH1-204ENST00000375290 ERGIC2Q96RQ1 377 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 ZBTB18Q99592 522 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 YIPF3Q9GZM5 350 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 PSMC3IPQ9P2W1 217 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-204ENST00000375290 H7C0C1 242 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 PRPSAP2O60256 369 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 ATP5OP48047 213 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 RPS8P62241 208 aaKnown RBP10.86□□□□□ -0.67
PTCH1-204ENST00000375290 TRIM60Q495X7 471 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 SWT1Q5T5J6 900 aaKnown RBP10.86□□□□□ -0.67
PTCH1-204ENST00000375290 SIRT2Q8IXJ6 389 aa10.86□□□□□ -0.67
PTCH1-204ENST00000375290 PNMA6FA0A0J9YX94 578 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 PHKG2P15735 406 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 MRRFQ96E11 262 aaKnown RBP10.85□□□□□ -0.67
PTCH1-204ENST00000375290 ZNF839A8K0R7 811 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 RHOBTB3O94955 611 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 SRGNP10124 158 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 ACTN3Q08043 901 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-204ENST00000375290 KIAA1755Q5JYT7 1200 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 SCYL1Q96KG9 808 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 VPS33BQ9H267 617 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 ASNSD1Q9NWL6 643 aa10.85□□□□□ -0.67
PTCH1-204ENST00000375290 ADD3Q9UEY8 706 aaKnown RBP10.85□□□□□ -0.67
PTCH1-204ENST00000375290 PNPLA7Q6ZV29 1317 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms