RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 TCTN1Q2MV58 587 aa17.78■□□□□ 0.44
HDHD3-202ENST00000374180 HYIQ5T013 277 aa17.78■□□□□ 0.44
HDHD3-202ENST00000374180 PADI6Q6TGC4 694 aa17.78■□□□□ 0.44
HDHD3-202ENST00000374180 KCTD17Q8N5Z5 321 aa17.78■□□□□ 0.44
HDHD3-202ENST00000374180 KRI1Q8N9T8 703 aaKnown RBP17.78■□□□□ 0.44
HDHD3-202ENST00000374180 NLRP7Q8WX94 980 aa17.78■□□□□ 0.44
HDHD3-202ENST00000374180 PSPC1Q8WXF1 523 aaKnown RBP17.78■□□□□ 0.44
HDHD3-202ENST00000374180 CALML4Q96GE6 196 aa17.78■□□□□ 0.44
HDHD3-202ENST00000374180 ZNF668Q96K58 619 aaPredicted RBP17.78■□□□□ 0.44
HDHD3-202ENST00000374180 CLIC6Q96NY7 704 aa17.78■□□□□ 0.44
HDHD3-202ENST00000374180 PLIN2Q99541 437 aa17.78■□□□□ 0.44
HDHD3-202ENST00000374180 BHMT2Q9H2M3 363 aa17.78■□□□□ 0.44
HDHD3-202ENST00000374180 E9PMD0 336 aa17.77■□□□□ 0.44
HDHD3-202ENST00000374180 SLC26A4O43511 780 aa17.77■□□□□ 0.44
HDHD3-202ENST00000374180 RPS6KA5O75582 802 aa17.77■□□□□ 0.44
HDHD3-202ENST00000374180 YEATS4O95619 227 aa17.77■□□□□ 0.44
HDHD3-202ENST00000374180 KCNJ6P48051 423 aa17.77■□□□□ 0.44
HDHD3-202ENST00000374180 DNM1Q05193 864 aaKnown RBP17.77■□□□□ 0.44
HDHD3-202ENST00000374180 PAK2Q13177 524 aa17.77■□□□□ 0.44
HDHD3-202ENST00000374180 SPECC1Q5M775 1068 aa17.77■□□□□ 0.44
HDHD3-202ENST00000374180 RASSF8Q8NHQ8 419 aa17.77■□□□□ 0.44
HDHD3-202ENST00000374180 TMEM40Q8WWA1 233 aa17.77■□□□□ 0.44
HDHD3-202ENST00000374180 PNMA5Q96PV4 448 aa17.77■□□□□ 0.44
HDHD3-202ENST00000374180 XPNPEP1Q9NQW7 623 aa17.77■□□□□ 0.44
HDHD3-202ENST00000374180 PADI3Q9ULW8 664 aa17.77■□□□□ 0.44
HDHD3-202ENST00000374180 NOC2LQ9Y3T9 749 aaKnown RBP17.77■□□□□ 0.44
HDHD3-202ENST00000374180 ATP6V1DQ9Y5K8 247 aa17.77■□□□□ 0.44
HDHD3-202ENST00000374180 COL4A3BPQ9Y5P4 624 aa17.77■□□□□ 0.44
HDHD3-202ENST00000374180 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.76■□□□□ 0.43
HDHD3-202ENST00000374180 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.76■□□□□ 0.43
HDHD3-202ENST00000374180 ASAP2O43150 1006 aa17.76■□□□□ 0.43
HDHD3-202ENST00000374180 PPP6R2O75170 966 aa17.76■□□□□ 0.43
HDHD3-202ENST00000374180 EYA4O95677 639 aa17.76■□□□□ 0.43
HDHD3-202ENST00000374180 EIF4BP23588 611 aaKnown RBP17.76■□□□□ 0.43
HDHD3-202ENST00000374180 NFX1Q12986 1120 aaKnown RBP17.76■□□□□ 0.43
HDHD3-202ENST00000374180 GRB10Q13322 594 aa17.76■□□□□ 0.43
HDHD3-202ENST00000374180 ODR4Q5SWX8 454 aa17.76■□□□□ 0.43
HDHD3-202ENST00000374180 MAEAQ7L5Y9 396 aa17.76■□□□□ 0.43
HDHD3-202ENST00000374180 ZNF410Q86VK4 478 aa17.76■□□□□ 0.43
HDHD3-202ENST00000374180 KSR1Q8IVT5 923 aa17.76■□□□□ 0.43
HDHD3-202ENST00000374180 MCPH1Q8NEM0 835 aa17.76■□□□□ 0.43
HDHD3-202ENST00000374180 NLRP4Q96MN2 994 aa17.76■□□□□ 0.43
HDHD3-202ENST00000374180 GCOM2Q9BZD3 368 aaPredicted RBP17.76■□□□□ 0.43
HDHD3-202ENST00000374180 A0A087WZ62 844 aa17.75■□□□□ 0.43
HDHD3-202ENST00000374180 GPR182O15218 404 aa17.75■□□□□ 0.43
HDHD3-202ENST00000374180 SRGAP2CP0DJJ0 459 aa17.75■□□□□ 0.43
HDHD3-202ENST00000374180 ATP2A2P16615 1042 aaKnown RBP17.75■□□□□ 0.43
HDHD3-202ENST00000374180 CYP11B2P19099 503 aa17.75■□□□□ 0.43
HDHD3-202ENST00000374180 WDR5P61964 334 aaKnown RBP17.75■□□□□ 0.43
HDHD3-202ENST00000374180 NUCB2P80303 420 aa17.75■□□□□ 0.43
HDHD3-202ENST00000374180 LAMTOR4Q0VGL1 99 aa17.75■□□□□ 0.43
HDHD3-202ENST00000374180 MXD4Q14582 209 aaPredicted RBP17.75■□□□□ 0.43
HDHD3-202ENST00000374180 KCNK18Q7Z418 384 aa17.75■□□□□ 0.43
HDHD3-202ENST00000374180 EPSTI1Q96J88 318 aa17.75■□□□□ 0.43
HDHD3-202ENST00000374180 FDXACB1Q9BRP7 624 aaPredicted RBP17.75■□□□□ 0.43
HDHD3-202ENST00000374180 CCSER1Q9C0I3 900 aa17.75■□□□□ 0.43
HDHD3-202ENST00000374180 ST3GAL5Q9UNP4 418 aa17.75■□□□□ 0.43
HDHD3-202ENST00000374180 DARSP14868 501 aaKnown RBP17.75■□□□□ 0.43
HDHD3-202ENST00000374180 NCLP19338 710 aaKnown RBP17.75■□□□□ 0.43
HDHD3-202ENST00000374180 TXLNAP40222 546 aa17.75■□□□□ 0.43
HDHD3-202ENST00000374180 KARSQ15046 597 aaKnown RBP17.75■□□□□ 0.43
HDHD3-202ENST00000374180 TMEM119Q4V9L6 283 aa17.75■□□□□ 0.43
HDHD3-202ENST00000374180 FAM109BQ6ICB4 259 aaPredicted RBP17.75■□□□□ 0.43
HDHD3-202ENST00000374180 USP49Q70CQ1 688 aa17.75■□□□□ 0.43
HDHD3-202ENST00000374180 PHOSPHO2Q8TCD6 241 aa17.75■□□□□ 0.43
HDHD3-202ENST00000374180 KCNG4Q8TDN1 519 aa17.75■□□□□ 0.43
HDHD3-202ENST00000374180 SYMPKQ92797 1274 aaKnown RBP17.75■□□□□ 0.43
HDHD3-202ENST00000374180 FTHL17Q9BXU8 183 aa17.75■□□□□ 0.43
HDHD3-202ENST00000374180 INO80BQ9C086 356 aaPredicted RBP17.75■□□□□ 0.43
HDHD3-202ENST00000374180 GRXCR1A8MXD5 290 aa17.74■□□□□ 0.43
HDHD3-202ENST00000374180 SSBP05455 408 aaKnown RBP eCLIP17.74■□□□□ 0.43
HDHD3-202ENST00000374180 ARL2P36404 184 aa17.74■□□□□ 0.43
HDHD3-202ENST00000374180 SMAD3P84022 425 aaKnown RBP17.74■□□□□ 0.43
HDHD3-202ENST00000374180 FAM102BQ5T8I3 360 aa17.74■□□□□ 0.43
HDHD3-202ENST00000374180 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.74■□□□□ 0.43
HDHD3-202ENST00000374180 FAM228AQ86W67 206 aa17.74■□□□□ 0.43
HDHD3-202ENST00000374180 SLC9A7Q96T83 725 aa17.74■□□□□ 0.43
HDHD3-202ENST00000374180 POLR3FQ9H1D9 316 aaPredicted RBP17.74■□□□□ 0.43
HDHD3-202ENST00000374180 ERVK-5Q9HDB9 667 aa17.74■□□□□ 0.43
HDHD3-202ENST00000374180 GPRC5CQ9NQ84 441 aa17.74■□□□□ 0.43
HDHD3-202ENST00000374180 CCDC39Q9UFE4 941 aa17.74■□□□□ 0.43
HDHD3-202ENST00000374180 SOX1O00570 391 aaPredicted RBP17.73■□□□□ 0.43
HDHD3-202ENST00000374180 ENPP3O14638 875 aa17.73■□□□□ 0.43
HDHD3-202ENST00000374180 CUTAO60888 179 aa17.73■□□□□ 0.43
HDHD3-202ENST00000374180 CSDE1O75534 798 aaKnown RBP17.73■□□□□ 0.43
HDHD3-202ENST00000374180 AMHP03971 560 aa17.73■□□□□ 0.43
HDHD3-202ENST00000374180 PLCG1P19174 1290 aa17.73■□□□□ 0.43
HDHD3-202ENST00000374180 DDIT3P35638 169 aa17.73■□□□□ 0.43
HDHD3-202ENST00000374180 ME1P48163 572 aa17.73■□□□□ 0.43
HDHD3-202ENST00000374180 KRT85P78386 507 aa17.73■□□□□ 0.43
HDHD3-202ENST00000374180 DEFB103AP81534 67 aa17.73■□□□□ 0.43
HDHD3-202ENST00000374180 TFDP1Q14186 410 aa17.73■□□□□ 0.43
HDHD3-202ENST00000374180 FAM43BQ6ZT52 329 aaPredicted RBP17.73■□□□□ 0.43
HDHD3-202ENST00000374180 SYT2Q8N9I0 419 aaPredicted RBP17.73■□□□□ 0.43
HDHD3-202ENST00000374180 RNF149Q8NC42 400 aa17.73■□□□□ 0.43
HDHD3-202ENST00000374180 IFT122Q9HBG6 1241 aa17.73■□□□□ 0.43
HDHD3-202ENST00000374180 RCOR1Q9UKL0 485 aa17.73■□□□□ 0.43
HDHD3-202ENST00000374180 PLA2G4BP0C869 781 aa17.72■□□□□ 0.43
HDHD3-202ENST00000374180 GLRA2P23416 452 aa17.72■□□□□ 0.43
HDHD3-202ENST00000374180 RINT1Q6NUQ1 792 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms