RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 FECHP22830 423 aa15.72■□□□□ 0.11
HMGA1-203ENST00000374116 GJA8P48165 433 aa15.72■□□□□ 0.11
HMGA1-203ENST00000374116 TMEM119Q4V9L6 283 aa15.72■□□□□ 0.11
HMGA1-203ENST00000374116 CNNM4Q6P4Q7 775 aa15.72■□□□□ 0.11
HMGA1-203ENST00000374116 NIPA1Q7RTP0 329 aa15.72■□□□□ 0.11
HMGA1-203ENST00000374116 CDHR1Q96JP9 859 aa15.72■□□□□ 0.11
HMGA1-203ENST00000374116 VPS16Q9H269 839 aa15.72■□□□□ 0.11
HMGA1-203ENST00000374116 EXOC1Q9NV70 894 aa15.72■□□□□ 0.11
HMGA1-203ENST00000374116 TAB2Q9NYJ8 693 aa15.72■□□□□ 0.11
HMGA1-203ENST00000374116 BICDL2A1A5D9 508 aa15.71■□□□□ 0.11
HMGA1-203ENST00000374116 POTEMA6NI47 508 aa15.71■□□□□ 0.11
HMGA1-203ENST00000374116 MAFGO15525 162 aa15.71■□□□□ 0.11
HMGA1-203ENST00000374116 MSCO60682 206 aa15.71■□□□□ 0.11
HMGA1-203ENST00000374116 CCNE2O96020 404 aa15.71■□□□□ 0.11
HMGA1-203ENST00000374116 GYPCP04921 128 aa15.71■□□□□ 0.11
HMGA1-203ENST00000374116 ZNF286BP0CG31 522 aa15.71■□□□□ 0.11
HMGA1-203ENST00000374116 CASP14P31944 242 aa15.71■□□□□ 0.11
HMGA1-203ENST00000374116 GJA9P57773 515 aa15.71■□□□□ 0.11
HMGA1-203ENST00000374116 NEDD9Q14511 834 aa15.71■□□□□ 0.11
HMGA1-203ENST00000374116 KCNA10Q16322 511 aa15.71■□□□□ 0.11
HMGA1-203ENST00000374116 FSCN1Q16658 493 aaKnown RBP15.71■□□□□ 0.11
HMGA1-203ENST00000374116 COBLL1Q53SF7 1204 aa15.71■□□□□ 0.11
HMGA1-203ENST00000374116 HYIQ5T013 277 aa15.71■□□□□ 0.11
HMGA1-203ENST00000374116 LRCH2Q5VUJ6 765 aa15.71■□□□□ 0.11
HMGA1-203ENST00000374116 KCNV1Q6PIU1 500 aa15.71■□□□□ 0.11
HMGA1-203ENST00000374116 TRMT1LQ7Z2T5 733 aaKnown RBP15.71■□□□□ 0.11
HMGA1-203ENST00000374116 IRF2BP1Q8IU81 584 aa15.71■□□□□ 0.11
HMGA1-203ENST00000374116 CPLX3Q8WVH0 158 aa15.71■□□□□ 0.11
HMGA1-203ENST00000374116 SENP7Q9BQF6 1050 aa15.71■□□□□ 0.11
HMGA1-203ENST00000374116 JPH1Q9HDC5 661 aaPredicted RBP15.71■□□□□ 0.11
HMGA1-203ENST00000374116 GAS7O60861 476 aa15.71■□□□□ 0.1
HMGA1-203ENST00000374116 OAS2P29728 719 aaKnown RBP15.71■□□□□ 0.1
HMGA1-203ENST00000374116 ASIC1P78348 528 aa15.71■□□□□ 0.1
HMGA1-203ENST00000374116 TTI2Q6NXR4 508 aa15.71■□□□□ 0.1
HMGA1-203ENST00000374116 SV2BQ7L1I2 683 aa15.71■□□□□ 0.1
HMGA1-203ENST00000374116 TRIM50Q86XT4 487 aa15.71■□□□□ 0.1
HMGA1-203ENST00000374116 GOLGA6L1Q8N7Z2 621 aa15.71■□□□□ 0.1
HMGA1-203ENST00000374116 SLC5A5Q92911 643 aa15.71■□□□□ 0.1
HMGA1-203ENST00000374116 MAGEC2Q9UBF1 373 aaPredicted RBP15.71■□□□□ 0.1
HMGA1-203ENST00000374116 SLC9A2Q9UBY0 812 aa15.71■□□□□ 0.1
HMGA1-203ENST00000374116 OGDHLQ9ULD0 1010 aa15.71■□□□□ 0.1
HMGA1-203ENST00000374116 TRIM49BA6NDI0 452 aa15.7■□□□□ 0.1
HMGA1-203ENST00000374116 NOP56O00567 594 aaKnown RBP15.7■□□□□ 0.1
HMGA1-203ENST00000374116 NKRFO15226 690 aaKnown RBP eCLIP15.7■□□□□ 0.1
HMGA1-203ENST00000374116 SLC26A4O43511 780 aa15.7■□□□□ 0.1
HMGA1-203ENST00000374116 IVLP07476 585 aa15.7■□□□□ 0.1
HMGA1-203ENST00000374116 MMP3P08254 477 aa15.7■□□□□ 0.1
HMGA1-203ENST00000374116 MYL3P08590 195 aa15.7■□□□□ 0.1
HMGA1-203ENST00000374116 CCNE1P24864 410 aa15.7■□□□□ 0.1
HMGA1-203ENST00000374116 MNX1P50219 401 aaPredicted RBP15.7■□□□□ 0.1
HMGA1-203ENST00000374116 UBXN1Q04323 297 aa15.7■□□□□ 0.1
HMGA1-203ENST00000374116 METTL7BQ6UX53 244 aa15.7■□□□□ 0.1
HMGA1-203ENST00000374116 CXCL17Q6UXB2 119 aa15.7■□□□□ 0.1
HMGA1-203ENST00000374116 TMTC1Q8IUR5 882 aa15.7■□□□□ 0.1
HMGA1-203ENST00000374116 LRRN4CLQ8ND94 238 aa15.7■□□□□ 0.1
HMGA1-203ENST00000374116 GPR20Q99678 358 aa15.7■□□□□ 0.1
HMGA1-203ENST00000374116 LRRC27Q9C0I9 530 aa15.7■□□□□ 0.1
HMGA1-203ENST00000374116 CRISPLD2Q9H0B8 497 aa15.7■□□□□ 0.1
HMGA1-203ENST00000374116 UNC45AQ9H3U1 944 aa15.7■□□□□ 0.1
HMGA1-203ENST00000374116 SPC25Q9HBM1 224 aa15.7■□□□□ 0.1
HMGA1-203ENST00000374116 PVALEFA0A1B0GWK0 134 aa15.69■□□□□ 0.1
HMGA1-203ENST00000374116 A0A1W2PQC6 194 aa15.69■□□□□ 0.1
HMGA1-203ENST00000374116 SOWAHDA6NJG2 315 aa15.69■□□□□ 0.1
HMGA1-203ENST00000374116 LGALS16A8MUM7 142 aa15.69■□□□□ 0.1
HMGA1-203ENST00000374116 PSMD10O75832 226 aa15.69■□□□□ 0.1
HMGA1-203ENST00000374116 ASGR1P07306 291 aa15.69■□□□□ 0.1
HMGA1-203ENST00000374116 FXR1P51114 621 aaKnown RBP eCLIP15.69■□□□□ 0.1
HMGA1-203ENST00000374116 PMS1P54277 932 aaKnown RBP15.69■□□□□ 0.1
HMGA1-203ENST00000374116 LAMC2Q13753 1193 aa15.69■□□□□ 0.1
HMGA1-203ENST00000374116 ECM1Q16610 540 aa15.69■□□□□ 0.1
HMGA1-203ENST00000374116 KRT79Q5XKE5 535 aa15.69■□□□□ 0.1
HMGA1-203ENST00000374116 RNF180Q86T96 592 aa15.69■□□□□ 0.1
HMGA1-203ENST00000374116 FAM114A1Q8IWE2 563 aa15.69■□□□□ 0.1
HMGA1-203ENST00000374116 KLHDC9Q8NEP7 349 aa15.69■□□□□ 0.1
HMGA1-203ENST00000374116 RAD54LQ92698 747 aa15.69■□□□□ 0.1
HMGA1-203ENST00000374116 P2RX5Q93086 422 aa15.69■□□□□ 0.1
HMGA1-203ENST00000374116 CDK5RAP3Q96JB5 506 aa15.69■□□□□ 0.1
HMGA1-203ENST00000374116 UPF3AQ9H1J1 476 aaKnown RBP15.69■□□□□ 0.1
HMGA1-203ENST00000374116 PCDHA12Q9UN75 941 aa15.69■□□□□ 0.1
HMGA1-203ENST00000374116 SAMM50Q9Y512 469 aa15.69■□□□□ 0.1
HMGA1-203ENST00000374116 ADGRG1Q9Y653 693 aa15.69■□□□□ 0.1
HMGA1-203ENST00000374116 GSTTP1A0A1W2PQM5 241 aa15.68■□□□□ 0.1
HMGA1-203ENST00000374116 MYMKA6NI61 221 aa15.68■□□□□ 0.1
HMGA1-203ENST00000374116 RBAK-RBAKDNI3L0D1 243 aa15.68■□□□□ 0.1
HMGA1-203ENST00000374116 EML1O00423 815 aa15.68■□□□□ 0.1
HMGA1-203ENST00000374116 GUCY2CP25092 1073 aa15.68■□□□□ 0.1
HMGA1-203ENST00000374116 TCF7P36402 384 aaPredicted RBP15.68■□□□□ 0.1
HMGA1-203ENST00000374116 ACTR2P61160 394 aa15.68■□□□□ 0.1
HMGA1-203ENST00000374116 GNG11P61952 73 aa15.68■□□□□ 0.1
HMGA1-203ENST00000374116 PSMC6P62333 389 aa15.68■□□□□ 0.1
HMGA1-203ENST00000374116 SMC1AQ14683 1233 aaKnown RBP15.68■□□□□ 0.1
HMGA1-203ENST00000374116 CCSAPQ6IQ19 270 aaPredicted RBP15.68■□□□□ 0.1
HMGA1-203ENST00000374116 CC2D1AQ6P1N0 951 aaPredicted RBP15.68■□□□□ 0.1
HMGA1-203ENST00000374116 RAD9BQ6WBX8 426 aa15.68■□□□□ 0.1
HMGA1-203ENST00000374116 KCNK18Q7Z418 384 aa15.68■□□□□ 0.1
HMGA1-203ENST00000374116 GPR161Q8N6U8 529 aaKnown RBP15.68■□□□□ 0.1
HMGA1-203ENST00000374116 PPTC7Q8NI37 304 aa15.68■□□□□ 0.1
HMGA1-203ENST00000374116 LARP4BQ92615 738 aaKnown RBP15.68■□□□□ 0.1
HMGA1-203ENST00000374116 TEKT3Q9BXF9 490 aa15.68■□□□□ 0.1
HMGA1-203ENST00000374116 ABHD10Q9NUJ1 306 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms