RNA–Protein interactions for RNA: ENST00000373190.5

PTPRT-204, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-204ENST00000373190 TRIM60Q495X7 471 aa9.38□□□□□ -0.91
PTPRT-204ENST00000373190 WWP1Q9H0M0 922 aa9.38□□□□□ -0.91
PTPRT-204ENST00000373190 USP15Q9Y4E8 981 aaPredicted RBP9.38□□□□□ -0.91
PTPRT-204ENST00000373190 CHN1P15882 459 aa9.38□□□□□ -0.91
PTPRT-204ENST00000373190 CYFIP2Q96F07 1278 aa9.38□□□□□ -0.91
PTPRT-204ENST00000373190 FBXL5Q9UKA1 691 aa9.38□□□□□ -0.91
PTPRT-204ENST00000373190 BTDP43251 543 aa9.38□□□□□ -0.91
PTPRT-204ENST00000373190 IGBP1P78318 339 aa9.38□□□□□ -0.91
PTPRT-204ENST00000373190 MAP3K10Q02779 954 aa9.38□□□□□ -0.91
PTPRT-204ENST00000373190 EFTUD2Q15029 972 aaKnown RBP eCLIP9.38□□□□□ -0.91
PTPRT-204ENST00000373190 FAM160B1Q5W0V3 765 aa9.38□□□□□ -0.91
PTPRT-204ENST00000373190 RAPGEF5Q92565 580 aa9.38□□□□□ -0.91
PTPRT-204ENST00000373190 MTBPQ96DY7 904 aa9.38□□□□□ -0.91
PTPRT-204ENST00000373190 CCDC87Q9NVE4 849 aa9.38□□□□□ -0.91
PTPRT-204ENST00000373190 GOLGA8MH3BSY2 632 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 IL10P22301 178 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 TSTA3Q13630 321 aaPredicted RBP9.37□□□□□ -0.91
PTPRT-204ENST00000373190 DNAJC9Q8WXX5 260 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 GTPBP10A4D1E9 387 aaKnown RBP9.37□□□□□ -0.91
PTPRT-204ENST00000373190 PYGLP06737 847 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 PGM1P36871 562 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 PI4K2BQ8TCG2 481 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 XPOTO43592 962 aaKnown RBP9.37□□□□□ -0.91
PTPRT-204ENST00000373190 KRT8P05787 483 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 RPS8P62241 208 aaKnown RBP9.37□□□□□ -0.91
PTPRT-204ENST00000373190 CRYMQ14894 314 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 OLFML2BQ68BL8 750 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 LRIG3Q6UXM1 1119 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 NAF1Q96HR8 494 aaKnown RBP9.37□□□□□ -0.91
PTPRT-204ENST00000373190 DDX47Q9H0S4 455 aaKnown RBP9.37□□□□□ -0.91
PTPRT-204ENST00000373190 SLC13A4Q9UKG4 626 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 MYH7P12883 1935 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 STK36Q9NRP7 1315 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 MEIS1O00470 390 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 PCCAP05165 728 aaPredicted RBP9.37□□□□□ -0.91
PTPRT-204ENST00000373190 DNAL1Q4LDG9 190 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 TOB2Q14106 344 aaPredicted RBP9.37□□□□□ -0.91
PTPRT-204ENST00000373190 HSPH1Q92598 858 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 KCNF1Q9H3M0 494 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 PCIF1Q9H4Z3 704 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 YEATS2Q9ULM3 1422 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 WDR19Q8NEZ3 1342 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 TRIM49BA6NDI0 452 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 FAM107AO95990 144 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 BYSLQ13895 437 aaKnown RBP9.37□□□□□ -0.91
PTPRT-204ENST00000373190 ATP11CQ8NB49 1132 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 ZNF564Q8TBZ8 553 aaPredicted RBP9.37□□□□□ -0.91
PTPRT-204ENST00000373190 SEC16BQ96JE7 1060 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 CYP4F11Q9HBI6 524 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 OLA1Q9NTK5 396 aaKnown RBP9.37□□□□□ -0.91
PTPRT-204ENST00000373190 SEPT3Q9UH03 358 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 FGFR4P22455 802 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 AARSP49588 968 aaKnown RBP eCLIP9.37□□□□□ -0.91
PTPRT-204ENST00000373190 GTSE1Q9NYZ3 720 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 CDK12Q9NYV4 1490 aaPredicted RBP9.37□□□□□ -0.91
PTPRT-204ENST00000373190 SUPT3HO75486 399 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 SLC4A1P02730 911 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 FRA10AC1Q70Z53 315 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 SCG3Q8WXD2 468 aaKnown RBP9.37□□□□□ -0.91
PTPRT-204ENST00000373190 NRBP2Q9NSY0 501 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 PKD2L2Q9NZM6 624 aa9.37□□□□□ -0.91
PTPRT-204ENST00000373190 ZNF608Q9ULD9 1512 aaPredicted RBP9.36□□□□□ -0.91
PTPRT-204ENST00000373190 AGTP01019 485 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 PMS1P54277 932 aaKnown RBP9.36□□□□□ -0.91
PTPRT-204ENST00000373190 SEMA3FQ13275 785 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 TNFAIP1Q13829 316 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 ARL13BQ3SXY8 428 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 ZBED8Q8IZ13 594 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 COG4Q9H9E3 785 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 PFASO15067 1338 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 CACNA1FO60840 1977 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 ESRRBO95718 433 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 RFX1P22670 979 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 MRPL28Q13084 256 aaKnown RBP9.36□□□□□ -0.91
PTPRT-204ENST00000373190 CYTH1Q15438 398 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 RFX8Q6ZV50 586 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 AIFM3Q96NN9 605 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 LRRC1Q9BTT6 524 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 SNX12Q9UMY4 172 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 PLEKHG1Q9ULL1 1385 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 TMEM247A6NEH6 219 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 SURF1Q15526 300 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 FAM83BQ5T0W9 1011 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 TBC1D9BQ66K14 1250 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 EXOC8Q8IYI6 725 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 STAG2Q8N3U4 1231 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 GPS1Q13098 491 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 HABP4Q5JVS0 413 aaKnown RBP9.36□□□□□ -0.91
PTPRT-204ENST00000373190 SIRT2Q8IXJ6 389 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 PRPF38AQ8NAV1 312 aaKnown RBP9.36□□□□□ -0.91
PTPRT-204ENST00000373190 ASPSCR1Q9BZE9 553 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 LZTS1Q9Y250 596 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 TFAMQ00059 246 aaKnown RBP9.36□□□□□ -0.91
PTPRT-204ENST00000373190 TEX2Q8IWB9 1127 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 AURKCQ9UQB9 309 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 ASAP2O43150 1006 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 NCK2O43639 380 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 E4F1Q66K89 784 aaPredicted RBP9.36□□□□□ -0.91
PTPRT-204ENST00000373190 SLFN13Q68D06 897 aa9.36□□□□□ -0.91
PTPRT-204ENST00000373190 RYBPQ8N488 228 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms