RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 RCOR1Q9UKL0 485 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 PCDHB6Q9Y5E3 794 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 NCAPD2Q15021 1401 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.58□□□□□ -0.72
TRERF1-204ENST00000372922 CALB1P05937 261 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 ATP6V1E1P36543 226 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 BBS9Q3SYG4 887 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 KCTD16Q68DU8 428 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 C16orf87Q6PH81 154 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 TMEM35BQ8NCS4 154 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 CCDC138Q96M89 665 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 ACAP3Q96P50 834 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 TDRD3Q9H7E2 651 aaKnown RBP10.58□□□□□ -0.72
TRERF1-204ENST00000372922 HACD3Q9P035 362 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 RNF181Q9P0P0 153 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 SCHIP1Q9P0W5 487 aaPredicted RBP10.58□□□□□ -0.72
TRERF1-204ENST00000372922 KCNH4Q9UQ05 1017 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 SNX2O60749 519 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 CYP2E1P05181 493 aaPredicted RBP10.58□□□□□ -0.72
TRERF1-204ENST00000372922 UNC13DQ70J99 1090 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 TTC39CQ8N584 583 aa10.58□□□□□ -0.72
TRERF1-204ENST00000372922 RBM41Q96IZ5 413 aaKnown RBP10.58□□□□□ -0.72
TRERF1-204ENST00000372922 KLHL8Q9P2G9 620 aaPredicted RBP10.58□□□□□ -0.72
TRERF1-204ENST00000372922 FDX1P10109 184 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 CDC25AP30304 524 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 C2orf54Q08AI8 447 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 TBC1D9BQ66K14 1250 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 TTC13Q8NBP0 860 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 PIGOQ8TEQ8 1089 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 SNX19Q92543 992 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 TMCC1O94876 653 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 NOP14P78316 857 aaKnown RBP10.57□□□□□ -0.72
TRERF1-204ENST00000372922 DHX9Q08211 1270 aaKnown RBP10.57□□□□□ -0.72
TRERF1-204ENST00000372922 SCG3Q8WXD2 468 aaKnown RBP10.57□□□□□ -0.72
TRERF1-204ENST00000372922 FAM20AQ96MK3 541 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 GCOM2Q9BZD3 368 aaPredicted RBP10.57□□□□□ -0.72
TRERF1-204ENST00000372922 LZTS1Q9Y250 596 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 H7C1W4 665 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 TRIP13Q15645 432 aaPredicted RBP10.57□□□□□ -0.72
TRERF1-204ENST00000372922 KYAT1Q16773 422 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 AFG1LQ8WV93 481 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 ADAM22Q9P0K1 906 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 TTC37Q6PGP7 1564 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 ROBO2Q9HCK4 1378 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 IQCA1LA6NCM1 817 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 OCRLQ01968 901 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 NBPF20Q3BBV1 942 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 NUDT18Q6ZVK8 323 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 HINFPQ9BQA5 517 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 PDE11AQ9HCR9 933 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 UTYO14607 1347 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 SFI1A8K8P3 1242 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 ESRRBO95718 433 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 NCF2P19878 526 aaPredicted RBP10.57□□□□□ -0.72
TRERF1-204ENST00000372922 TBXAS1P24557 533 aaPredicted RBP10.57□□□□□ -0.72
TRERF1-204ENST00000372922 EIF3BP55884 814 aaKnown RBP10.57□□□□□ -0.72
TRERF1-204ENST00000372922 PADI6Q6TGC4 694 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 RNF146Q9NTX7 359 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 GDAQ9Y2T3 454 aa10.57□□□□□ -0.72
TRERF1-204ENST00000372922 PLEKHA8P1O95397 391 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 TFDP2Q14188 446 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 SLC9A5Q14940 896 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 PPP6R3Q5H9R7 873 aaPredicted RBP10.56□□□□□ -0.72
TRERF1-204ENST00000372922 ANGPTL8Q6UXH0 198 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 TMCO5AQ8N6Q1 288 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 XXYLT1Q8NBI6 393 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 PANX2Q96RD6 677 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 STRBPQ96SI9 672 aaKnown RBP10.56□□□□□ -0.72
TRERF1-204ENST00000372922 TRIM62Q9BVG3 475 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 CD209Q9NNX6 404 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 KRT82Q9NSB4 513 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 MINPP1Q9UNW1 487 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 COL15A1P39059 1388 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 TPD52L2O43399 206 aaKnown RBP10.56□□□□□ -0.72
TRERF1-204ENST00000372922 KDM1AO60341 852 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 ARHGDIAP52565 204 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 CACNB3P54284 484 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 ORC2Q13416 577 aaPredicted RBP10.56□□□□□ -0.72
TRERF1-204ENST00000372922 FMO2Q99518 471 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 TBK1Q9UHD2 729 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 TRPA1O75762 1119 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 SASH1O94885 1247 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 CXCR5P32302 372 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 MCAMP43121 646 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 RHPN2Q8IUC4 686 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 PROM2Q8N271 834 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 MB21D1Q8N884 522 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 SH3GL3Q99963 347 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 CYP26B1Q9NR63 512 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 GINM1Q9NU53 330 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 MAP3K20Q9NYL2 800 aaKnown RBP10.56□□□□□ -0.72
TRERF1-204ENST00000372922 ITM2BQ9Y287 266 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 CDK12Q9NYV4 1490 aaPredicted RBP10.56□□□□□ -0.72
TRERF1-204ENST00000372922 AFF2P51816 1311 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 ADCY1Q08828 1119 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 NSUN2Q08J23 767 aaKnown RBP eCLIP10.56□□□□□ -0.72
TRERF1-204ENST00000372922 TTC23LQ6PF05 361 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 PIP4K2CQ8TBX8 421 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 EXT2Q93063 718 aa10.56□□□□□ -0.72
TRERF1-204ENST00000372922 EIF2AQ9BY44 585 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms