RNA–Protein interactions for RNA: ENST00000372739.5

SPTAN1-203, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-203ENST00000372739 ACAD11Q709F0 780 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 APOBEC3FQ8IUX4 373 aaKnown RBP10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 WDR75Q8IWA0 830 aaKnown RBP10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 XXYLT1Q8NBI6 393 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 CEP19Q96LK0 163 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 HACD3Q9P035 362 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 ITM2BQ9Y287 266 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 MFAP3LO75121 409 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 CDC25AP30304 524 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 ZNF568Q3ZCX4 644 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 FAM20AQ96MK3 541 aa10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 TRIM45Q9H8W5 580 aaPredicted RBP10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 PIH1D3Q9NQM4 214 aaKnown RBP10.07□□□□□ -0.8
SPTAN1-203ENST00000372739 CYP2D7A0A087X1C5 515 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 ACSL3O95573 720 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 RCAN1P53805 252 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 KYAT1Q16773 422 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 PFKFB3Q16875 520 aaPredicted RBP10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 FASTKD5Q7L8L6 764 aaKnown RBP10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 ALKBH8Q96BT7 664 aaKnown RBP10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 TRPV6Q9H1D0 765 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 PIM2Q9P1W9 311 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 RIMBP3CA6NJZ7 1639 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 RIMBP3BA6NNM3 1639 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 RIMBP3Q9UFD9 1639 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 KLHL38Q2WGJ6 581 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 DNAJC12Q9UKB3 198 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 UBE4BO95155 1302 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 H3BRJ5 948 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 TRPA1O75762 1119 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 ATP5HO75947 161 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 EEF1DP29692 281 aaKnown RBP10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 NNMTP40261 264 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 TTLL4Q14679 1199 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 TRIM59Q8IWR1 403 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 TRMT2AQ8IZ69 625 aaKnown RBP10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 TTC8Q8TAM2 541 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 SEL1LQ9UBV2 794 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 CFLARO15519 480 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 ZRANB2O95218 330 aaKnown RBP eCLIP10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 NR3C1P04150 777 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 ATXN8OSP0DMR3 200 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 MYBL1P10243 752 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 SLC7A5Q01650 507 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 PPP6R3Q5H9R7 873 aaPredicted RBP10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 ACAP3Q96P50 834 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 CENPKQ9BS16 269 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 SAYSD1Q9NPB0 183 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 RRP15Q9Y3B9 282 aaKnown RBP10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 BNIP3LO60238 219 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 PLEKHA8P1O95397 391 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 COPB2P35606 906 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 FAM83BQ5T0W9 1011 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 TWF2Q6IBS0 349 aaKnown RBP10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 PIGOQ8TEQ8 1089 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 EXT2Q93063 718 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 EXOC4Q96A65 974 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 SUDS3Q9H7L9 328 aaPredicted RBP10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 ZNF302Q9NR11 478 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 L3MBTL1Q9Y468 752 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 SLC10A5Q5PT55 438 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 SUSD4Q5VX71 490 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 PIGBQ92521 554 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 RAD54LQ92698 747 aa10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 CNOT8Q9UFF9 292 aaKnown RBP10.06□□□□□ -0.8
SPTAN1-203ENST00000372739 COPS2P61201 443 aa10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 LLGL1Q15334 1064 aa10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 IMPG1Q17R60 797 aa10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 NAALADL2Q58DX5 795 aa10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 TRMT10CQ7L0Y3 403 aaKnown RBP10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 PIP4K2CQ8TBX8 421 aa10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 PARD6BQ9BYG5 372 aa10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 TRIM55Q9BYV6 548 aa10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 FTOQ9C0B1 505 aaKnown RBP eCLIP10.05□□□□□ -0.81e-7■■□□□ 13.2
SPTAN1-203ENST00000372739 APOBEC2Q9Y235 224 aaKnown RBP10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 USP17L5A8MUK1 530 aa10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 PFDN1O60925 122 aa10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 MCAMP43121 646 aa10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 NSUN2Q08J23 767 aaKnown RBP eCLIP10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 BANK1Q8NDB2 785 aa10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 TTLL11Q8NHH1 800 aa10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 NSUN6Q8TEA1 469 aaKnown RBP10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 STRBPQ96SI9 672 aaKnown RBP10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 TMEM60Q9H2L4 133 aa10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 CPSF1Q10570 1443 aaKnown RBP10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 PALMO75781 387 aa10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 TMPRSS15P98073 1019 aa10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 MDM2Q00987 491 aaPredicted RBP10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 MKRN3Q13064 507 aaKnown RBP10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 SEMA3FQ13275 785 aa10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 NCLNQ969V3 563 aa10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 CDC42BPBQ9Y5S2 1711 aa10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 ESRRBO95718 433 aa10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 SNAP25P60880 206 aa10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 NFX1Q12986 1120 aaKnown RBP10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 PADI6Q6TGC4 694 aa10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 PI16Q6UXB8 463 aa10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 MYCBPQ99417 103 aaPredicted RBP10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 STAP1Q9ULZ2 295 aa10.05□□□□□ -0.8
SPTAN1-203ENST00000372739 POLIQ9UNA4 740 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms