RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 GSTP1P09211 210 aaKnown RBP4.11□□□□□ -1.75
MCF2-202ENST00000370573 TFE3P19532 575 aaPredicted RBP4.11□□□□□ -1.75
MCF2-202ENST00000370573 EPHX2P34913 555 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 LIG3P49916 1009 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 AP3B2Q13367 1082 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 C21orf62-AS1Q17RA5 79 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 CERKLQ49MI3 558 aaPredicted RBP4.11□□□□□ -1.75
MCF2-202ENST00000370573 RPS26P11Q5JNZ5 115 aaPredicted RBP4.11□□□□□ -1.75
MCF2-202ENST00000370573 IFIT1BQ5T764 474 aaKnown RBP4.11□□□□□ -1.75
MCF2-202ENST00000370573 MAP1SQ66K74 1059 aaPredicted RBP4.11□□□□□ -1.75
MCF2-202ENST00000370573 PAOXQ6QHF9 649 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 NFXL1Q6ZNB6 911 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 SPATC1Q76KD6 591 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 IQCA1Q86XH1 822 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 DGKHQ86XP1 1220 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 HOMER1Q86YM7 354 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 CCDC144CPQ8IYA2 1237 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 TMTC2Q8N394 836 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 CEP95Q96GE4 821 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 TMEM47Q9BQJ4 181 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 TAF1DQ9H5J8 278 aaPredicted RBP4.11□□□□□ -1.75
MCF2-202ENST00000370573 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.11□□□□□ -1.75
MCF2-202ENST00000370573 ZNF287Q9HBT7 754 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 MTMR4Q9NYA4 1195 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 NAP1L2Q9ULW6 460 aaPredicted RBP4.11□□□□□ -1.75
MCF2-202ENST00000370573 ERICH2A1L162 156 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 CCDC69A6NI79 296 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 FAM170BA6NMN3 283 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 TLR3O15455 904 aaKnown RBP4.1□□□□□ -1.75
MCF2-202ENST00000370573 PDPK1O15530 556 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 ZBTB43O43298 467 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 ZNF862O60290 1169 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 NT5C2P49902 561 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 PPP2R3AQ06190 1150 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 TROAPQ12815 778 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 TNFAIP1Q13829 316 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 SEPT2Q15019 361 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 SART3Q15020 963 aaKnown RBP4.1□□□□□ -1.75
MCF2-202ENST00000370573 NTRK3Q16288 839 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 SEZ6Q53EL9 994 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 ARSHQ5FYA8 562 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 USP50Q70EL3 339 aaPredicted RBP4.1□□□□□ -1.75
MCF2-202ENST00000370573 RASGRP2Q7LDG7 609 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 SLITRK4Q8IW52 837 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 SULF2Q8IWU5 870 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 PRPF38AQ8NAV1 312 aaKnown RBP4.1□□□□□ -1.75
MCF2-202ENST00000370573 FANCBQ8NB91 859 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 SMARCC2Q8TAQ2 1214 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 CHMP4CQ96CF2 233 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 SGSM3Q96HU1 749 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 CCDC17Q96LX7 622 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.1□□□□□ -1.75
MCF2-202ENST00000370573 HERC5Q9UII4 1024 aaKnown RBP4.1□□□□□ -1.75
MCF2-202ENST00000370573 FZD1Q9UP38 647 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 MAPK8IP1Q9UQF2 711 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 ZDHHC9Q9Y397 364 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 R3HCC1Q9Y3T6 440 aaKnown RBP4.1□□□□□ -1.75
MCF2-202ENST00000370573 SLC12A7Q9Y666 1083 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 PLIN4Q96Q06 1357 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 GREB1LQ9C091 1923 aaPredicted RBP4.1□□□□□ -1.75
MCF2-202ENST00000370573 GOLGA8AA7E2F4 631 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 ADM5C9JUS6 153 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 UBE2Q2LH0YL09 131 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 MPHOSPH10O00566 681 aaKnown RBP4.1□□□□□ -1.75
MCF2-202ENST00000370573 EIF4EBP3O60516 100 aaPredicted RBP4.1□□□□□ -1.75
MCF2-202ENST00000370573 COBLO75128 1261 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 ADAMTS4O75173 837 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 PAGE1O75459 146 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 GH2P01242 217 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 HSP90AA1P07900 732 aaKnown RBP4.1□□□□□ -1.75
MCF2-202ENST00000370573 FDPSP14324 419 aaKnown RBP4.1□□□□□ -1.75
MCF2-202ENST00000370573 GJB2P29033 226 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 METAP2P50579 478 aaKnown RBP eCLIP4.1□□□□□ -1.75
MCF2-202ENST00000370573 PKP1Q13835 747 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 COL9A2Q14055 689 aaPredicted RBP4.1□□□□□ -1.75
MCF2-202ENST00000370573 ABCB5Q2M3G0 1257 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 SLC35G1Q2M3R5 365 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 CCDC178Q5BJE1 867 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 BNC2Q6ZN30 1099 aaPredicted RBP4.1□□□□□ -1.75
MCF2-202ENST00000370573 FERMT3Q86UX7 667 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 MICU3Q86XE3 530 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 APOBEC3FQ8IUX4 373 aaKnown RBP4.1□□□□□ -1.75
MCF2-202ENST00000370573 NSUN7Q8NE18 718 aaKnown RBP4.1□□□□□ -1.75
MCF2-202ENST00000370573 GRIN3AQ8TCU5 1115 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 NUP133Q8WUM0 1156 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 NKD1Q969G9 470 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 DDX11Q96FC9 970 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 FEZ1Q99689 392 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 KAT14Q9H8E8 782 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 ZFYVE1Q9HBF4 777 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 CLIP2Q9UDT6 1046 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 STX8Q9UNK0 236 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 WDR90Q96KV7 1748 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 PITPNM2Q9BZ72 1349 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 SSC5DA1L4H1 1573 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 MYH8P13535 1937 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 NID2Q14112 1375 aa4.1□□□□□ -1.75
MCF2-202ENST00000370573 A0A1W2PRG0 241 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 PTPDC1A2A3K4 754 aa4.09□□□□□ -1.75
MCF2-202ENST00000370573 ENC1O14682 589 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms