RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 PASD1Q8IV76 773 aa21.08■□□□□ 0.97
LMO4-202ENST00000370544 EFCAB13Q8IY85 973 aa21.08■□□□□ 0.97
LMO4-202ENST00000370544 ZNF710Q8N1W2 664 aa21.08■□□□□ 0.97
LMO4-202ENST00000370544 POLR3FQ9H1D9 316 aaPredicted RBP21.08■□□□□ 0.97
LMO4-202ENST00000370544 USH1CQ9Y6N9 552 aa21.08■□□□□ 0.97
LMO4-202ENST00000370544 ZNF609O15014 1411 aa21.08■□□□□ 0.97
LMO4-202ENST00000370544 DHX40Q8IX18 779 aaKnown RBP21.08■□□□□ 0.97
LMO4-202ENST00000370544 LRGUKQ96M69 825 aa21.08■□□□□ 0.97
LMO4-202ENST00000370544 INTS2Q9H0H0 1204 aaKnown RBP21.08■□□□□ 0.97
LMO4-202ENST00000370544 TRIM68Q6AZZ1 485 aa21.08■□□□□ 0.96
LMO4-202ENST00000370544 PCGF5Q86SE9 256 aa21.08■□□□□ 0.96
LMO4-202ENST00000370544 PYROXD1Q8WU10 500 aa21.08■□□□□ 0.96
LMO4-202ENST00000370544 RBM41Q96IZ5 413 aaKnown RBP21.08■□□□□ 0.96
LMO4-202ENST00000370544 CALR3Q96L12 384 aaKnown RBP21.08■□□□□ 0.96
LMO4-202ENST00000370544 NAALADL2Q58DX5 795 aa21.08■□□□□ 0.96
LMO4-202ENST00000370544 ZNF34Q8IZ26 560 aa21.08■□□□□ 0.96
LMO4-202ENST00000370544 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.08■□□□□ 0.96
LMO4-202ENST00000370544 EMBQ6PCB8 327 aa21.07■□□□□ 0.96
LMO4-202ENST00000370544 GUF1Q8N442 669 aaKnown RBP21.07■□□□□ 0.96
LMO4-202ENST00000370544 TTC1Q99614 292 aa21.07■□□□□ 0.96
LMO4-202ENST00000370544 GINM1Q9NU53 330 aa21.07■□□□□ 0.96
LMO4-202ENST00000370544 LCMT1Q9UIC8 334 aa21.07■□□□□ 0.96
LMO4-202ENST00000370544 MYO3AQ8NEV4 1616 aa21.07■□□□□ 0.96
LMO4-202ENST00000370544 PODXLO00592 558 aa21.07■□□□□ 0.96
LMO4-202ENST00000370544 SLC8A1P32418 973 aa21.07■□□□□ 0.96
LMO4-202ENST00000370544 GLE1Q53GS7 698 aaKnown RBP21.07■□□□□ 0.96
LMO4-202ENST00000370544 MYLK4Q86YV6 388 aaPredicted RBP21.07■□□□□ 0.96
LMO4-202ENST00000370544 C2orf40Q9H1Z8 148 aa21.07■□□□□ 0.96
LMO4-202ENST00000370544 BAG5Q9UL15 447 aa21.07■□□□□ 0.96
LMO4-202ENST00000370544 CSPG5O95196 566 aa21.07■□□□□ 0.96
LMO4-202ENST00000370544 CALB1P05937 261 aa21.07■□□□□ 0.96
LMO4-202ENST00000370544 RHPN2Q8IUC4 686 aa21.07■□□□□ 0.96
LMO4-202ENST00000370544 Q9H521 79 aa21.07■□□□□ 0.96
LMO4-202ENST00000370544 ZDHHC9Q9Y397 364 aa21.07■□□□□ 0.96
LMO4-202ENST00000370544 PTPRUQ92729 1446 aa21.07■□□□□ 0.96
LMO4-202ENST00000370544 FDX1P10109 184 aa21.07■□□□□ 0.96
LMO4-202ENST00000370544 KRT10P13645 584 aa21.07■□□□□ 0.96
LMO4-202ENST00000370544 MMP19Q99542 508 aa21.07■□□□□ 0.96
LMO4-202ENST00000370544 DNAJC17Q9NVM6 304 aaKnown RBP21.07■□□□□ 0.96
LMO4-202ENST00000370544 PXDNLA1KZ92 1463 aa21.07■□□□□ 0.96
LMO4-202ENST00000370544 TOM1L1O75674 476 aa21.07■□□□□ 0.96
LMO4-202ENST00000370544 IQCB1Q15051 598 aa21.07■□□□□ 0.96
LMO4-202ENST00000370544 ABCA9Q8IUA7 1624 aa21.06■□□□□ 0.96
LMO4-202ENST00000370544 SRGAP2O75044 1071 aa21.06■□□□□ 0.96
LMO4-202ENST00000370544 NR1D1P20393 614 aa21.06■□□□□ 0.96
LMO4-202ENST00000370544 PPP6R3Q5H9R7 873 aaPredicted RBP21.06■□□□□ 0.96
LMO4-202ENST00000370544 FAF2Q96CS3 445 aa21.06■□□□□ 0.96
LMO4-202ENST00000370544 OSBPL5Q9H0X9 879 aaPredicted RBP21.06■□□□□ 0.96
LMO4-202ENST00000370544 DAGLAQ9Y4D2 1042 aa21.06■□□□□ 0.96
LMO4-202ENST00000370544 DLC1Q96QB1 1528 aa21.06■□□□□ 0.96
LMO4-202ENST00000370544 GDAP1Q8TB36 358 aa21.06■□□□□ 0.96
LMO4-202ENST00000370544 NUDCD1Q96RS6 583 aa21.06■□□□□ 0.96
LMO4-202ENST00000370544 CRAMP1Q96RY5 1269 aa21.06■□□□□ 0.96
LMO4-202ENST00000370544 ANO9A1A5B4 782 aa21.06■□□□□ 0.96
LMO4-202ENST00000370544 FOXN1O15353 648 aa21.06■□□□□ 0.96
LMO4-202ENST00000370544 ADCY2Q08462 1091 aa21.06■□□□□ 0.96
LMO4-202ENST00000370544 SEMA3FQ13275 785 aa21.06■□□□□ 0.96
LMO4-202ENST00000370544 SF3B3Q15393 1217 aaKnown RBP21.06■□□□□ 0.96
LMO4-202ENST00000370544 C6orf118Q5T5N4 469 aa21.06■□□□□ 0.96
LMO4-202ENST00000370544 RWDD4Q6NW29 188 aaKnown RBP21.06■□□□□ 0.96
LMO4-202ENST00000370544 THEM5Q8N1Q8 247 aa21.06■□□□□ 0.96
LMO4-202ENST00000370544 IQANK1A0A1B0GTG1 560 aa21.06■□□□□ 0.96
LMO4-202ENST00000370544 TBXAS1P24557 533 aaPredicted RBP21.06■□□□□ 0.96
LMO4-202ENST00000370544 SNCBQ16143 134 aa21.06■□□□□ 0.96
LMO4-202ENST00000370544 SPOPLQ6IQ16 392 aa21.06■□□□□ 0.96
LMO4-202ENST00000370544 OTUD5Q96G74 571 aa21.06■□□□□ 0.96
LMO4-202ENST00000370544 GBP5Q96PP8 586 aa21.06■□□□□ 0.96
LMO4-202ENST00000370544 RPAP3Q9H6T3 665 aaPredicted RBP21.06■□□□□ 0.96
LMO4-202ENST00000370544 UBN1Q9NPG3 1134 aa21.06■□□□□ 0.96
LMO4-202ENST00000370544 STRIP2Q9ULQ0 834 aa21.06■□□□□ 0.96
LMO4-202ENST00000370544 NEXMIFQ5QGS0 1516 aa21.05■□□□□ 0.96
LMO4-202ENST00000370544 CAMTA2O94983 1202 aa21.05■□□□□ 0.96
LMO4-202ENST00000370544 ACSL3O95573 720 aa21.05■□□□□ 0.96
LMO4-202ENST00000370544 MYCP01106 439 aaPredicted RBP21.05■□□□□ 0.96
LMO4-202ENST00000370544 SMIM5Q71RC9 77 aa21.05■□□□□ 0.96
LMO4-202ENST00000370544 LDHDQ86WU2 507 aa21.05■□□□□ 0.96
LMO4-202ENST00000370544 ASNSD1Q9NWL6 643 aa21.05■□□□□ 0.96
LMO4-202ENST00000370544 FNDC3AQ9Y2H6 1198 aaKnown RBP21.05■□□□□ 0.96
LMO4-202ENST00000370544 MRPS25P82663 173 aaKnown RBP21.05■□□□□ 0.96
LMO4-202ENST00000370544 BEST2Q8NFU1 509 aa21.05■□□□□ 0.96
LMO4-202ENST00000370544 FBXO2Q9UK22 296 aaPredicted RBP21.05■□□□□ 0.96
LMO4-202ENST00000370544 CLTCQ00610 1675 aaKnown RBP21.05■□□□□ 0.96
LMO4-202ENST00000370544 UBE4BO95155 1302 aa21.05■□□□□ 0.96
LMO4-202ENST00000370544 FLT1P17948 1338 aa21.05■□□□□ 0.96
LMO4-202ENST00000370544 ELF1P32519 619 aa21.05■□□□□ 0.96
LMO4-202ENST00000370544 CIITAP33076 1130 aa21.05■□□□□ 0.96
LMO4-202ENST00000370544 HVCN1Q96D96 273 aa21.05■□□□□ 0.96
LMO4-202ENST00000370544 NCAPGQ9BPX3 1015 aa21.05■□□□□ 0.96
LMO4-202ENST00000370544 C11orf70Q9BRQ4 267 aa21.05■□□□□ 0.96
LMO4-202ENST00000370544 RNF181Q9P0P0 153 aa21.05■□□□□ 0.96
LMO4-202ENST00000370544 TWF2Q6IBS0 349 aaKnown RBP21.05■□□□□ 0.96
LMO4-202ENST00000370544 SDCCAG3Q96C92 435 aa21.05■□□□□ 0.96
LMO4-202ENST00000370544 KLC2Q9H0B6 622 aa21.05■□□□□ 0.96
LMO4-202ENST00000370544 HUS1O60921 280 aa21.04■□□□□ 0.96
LMO4-202ENST00000370544 FCER1AP12319 257 aa21.04■□□□□ 0.96
LMO4-202ENST00000370544 DRAP1Q14919 205 aaPredicted RBP21.04■□□□□ 0.96
LMO4-202ENST00000370544 ZRANB2O95218 330 aaKnown RBP eCLIP21.04■□□□□ 0.96
LMO4-202ENST00000370544 CASP2P42575 452 aa21.04■□□□□ 0.96
LMO4-202ENST00000370544 EPHB1P54762 984 aa21.04■□□□□ 0.96
LMO4-202ENST00000370544 SAAL1Q96ER3 474 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms